RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 NISCHQ9Y2I1 1504 aa68.93■■■■■ 8.62
UBFD1-206ENST00000566669 CCDC180Q9P1Z9 1646 aa61.82■■■■■ 7.49
UBFD1-206ENST00000566669 ABCC9O60706 1549 aa61.44■■■■■ 7.43
UBFD1-206ENST00000566669 RB1CC1Q8TDY2 1594 aa58.76■■■■■ 7
UBFD1-206ENST00000566669 NACADO15069 1562 aa58.45■■■■■ 6.95
UBFD1-206ENST00000566669 DCAF8L2P0C7V8 631 aa57.99■■■■■ 6.87
UBFD1-206ENST00000566669 MYO15BQ96JP2 1530 aa57.82■■■■■ 6.85
UBFD1-206ENST00000566669 DNAJC5BQ9UF47 199 aa57.37■■■■■ 6.77
UBFD1-206ENST00000566669 PABPN1Q86U42 306 aaKnown RBP eCLIP57.21■■■■■ 6.75
UBFD1-206ENST00000566669 ZCCHC6Q5VYS8 1495 aaKnown RBP57.16■■■■■ 6.74
UBFD1-206ENST00000566669 UNC13AQ9UPW8 1703 aa57.16■■■■■ 6.74
UBFD1-206ENST00000566669 DCAF1Q9Y4B6 1507 aa57.09■■■■■ 6.73
UBFD1-206ENST00000566669 BICRAQ9NZM4 1560 aa56.87■■■■■ 6.69
UBFD1-206ENST00000566669 SHROOM4Q9ULL8 1493 aa56.5■■■■■ 6.63
UBFD1-206ENST00000566669 SCRIBQ14160 1630 aa56.15■■■■■ 6.58
UBFD1-206ENST00000566669 CC2D2AQ9P2K1 1620 aa55.55■■■■■ 6.48
UBFD1-206ENST00000566669 EIF4G1Q04637 1599 aaKnown RBP55.53■■■■■ 6.48
UBFD1-206ENST00000566669 CECR2Q9BXF3 1484 aa55.43■■■■■ 6.46
UBFD1-206ENST00000566669 NCAPD3P42695 1498 aa53.95■■■■■ 6.23
UBFD1-206ENST00000566669 ATAD2BQ9ULI0 1458 aa53.72■■■■■ 6.19
UBFD1-206ENST00000566669 SMARCA2P51531 1590 aa53.69■■■■■ 6.19
UBFD1-206ENST00000566669 SMARCA4P51532 1647 aa53.68■■■■■ 6.18
UBFD1-206ENST00000566669 HMGXB3Q12766 1538 aa53.56■■■■■ 6.16
UBFD1-206ENST00000566669 BAZ1AQ9NRL2 1556 aaPredicted RBP53.56■■■■■ 6.16
UBFD1-206ENST00000566669 PEG3Q9GZU2 1588 aa53.27■■■■■ 6.12
UBFD1-206ENST00000566669 BAZ1BQ9UIG0 1483 aaKnown RBP53.25■■■■■ 6.11
UBFD1-206ENST00000566669 ERCC6Q03468 1493 aa53.17■■■■■ 6.1
UBFD1-206ENST00000566669 CUX2O14529 1486 aa53.1■■■■■ 6.09
UBFD1-206ENST00000566669 MROH2BQ7Z745 1585 aa53■■■■■ 6.07
UBFD1-206ENST00000566669 NESP48681 1621 aa52.78■■■■■ 6.04
UBFD1-206ENST00000566669 DNAJC5Q9H3Z4 198 aa52.76■■■■■ 6.04
UBFD1-206ENST00000566669 LAMC3Q9Y6N6 1575 aa52.69■■■■■ 6.03
UBFD1-206ENST00000566669 PDS5BQ9NTI5 1447 aa52.44■■■■■ 5.99
UBFD1-206ENST00000566669 WIZO95785 1651 aa52.32■■■■■ 5.97
UBFD1-206ENST00000566669 CADPSQ9ULU8 1353 aa52.3■■■■■ 5.96
UBFD1-206ENST00000566669 THOC2Q8NI27 1593 aaKnown RBP52.3■■■■■ 5.96
UBFD1-206ENST00000566669 KIF21AQ7Z4S6 1674 aa52.11■■■■■ 5.93
UBFD1-206ENST00000566669 RSF1Q96T23 1441 aaPredicted RBP52.06■■■■■ 5.92
UBFD1-206ENST00000566669 MRC2Q9UBG0 1479 aa51.87■■■■■ 5.89
UBFD1-206ENST00000566669 TOP2AP11388 1531 aaKnown RBP51.84■■■■■ 5.89
UBFD1-206ENST00000566669 CFTRP13569 1480 aa51.73■■■■■ 5.87
UBFD1-206ENST00000566669 WDR62O43379 1518 aa51.72■■■■■ 5.87
UBFD1-206ENST00000566669 CEP164Q9UPV0 1460 aa51.72■■■■■ 5.87
UBFD1-206ENST00000566669 FANCD2Q9BXW9 1451 aa51.64■■■■■ 5.86
UBFD1-206ENST00000566669 CCDC88BA6NC98 1476 aa51.19■■■■■ 5.79
UBFD1-206ENST00000566669 PRDM2Q13029 1718 aa51.13■■■■■ 5.78
UBFD1-206ENST00000566669 URB2Q14146 1524 aaKnown RBP51.13■■■■■ 5.77
UBFD1-206ENST00000566669 ABCC8Q09428 1581 aa50.79■■■■■ 5.72
UBFD1-206ENST00000566669 IFT140Q96RY7 1462 aa50.71■■■■■ 5.71
UBFD1-206ENST00000566669 OSCARQ8IYS5 282 aa50.7■■■■■ 5.71
UBFD1-206ENST00000566669 TOPBP1Q92547 1522 aa50.67■■■■■ 5.7
UBFD1-206ENST00000566669 DNMBPQ6XZF7 1577 aa50.53■■■■■ 5.68
UBFD1-206ENST00000566669 ZNF608Q9ULD9 1512 aaPredicted RBP50.42■■■■■ 5.66
UBFD1-206ENST00000566669 TRIM41Q8WV44 630 aa50.39■■■■■ 5.66
UBFD1-206ENST00000566669 EIF4G3O43432 1585 aaKnown RBP50.21■■■■■ 5.63
UBFD1-206ENST00000566669 TARBP1Q13395 1621 aaKnown RBP50.16■■■■■ 5.62
UBFD1-206ENST00000566669 POLA1P09884 1462 aaPredicted RBP50.15■■■■■ 5.62
UBFD1-206ENST00000566669 AQRO60306 1485 aaKnown RBP eCLIP50.03■■■■■ 5.66e-7■■■□□ 17.4
UBFD1-206ENST00000566669 SOGA1O94964 1423 aa49.98■■■■■ 5.59
UBFD1-206ENST00000566669 WDR97A6NE52 1622 aa49.9■■■■■ 5.58
UBFD1-206ENST00000566669 RAD54L2Q9Y4B4 1467 aa49.88■■■■■ 5.57
UBFD1-206ENST00000566669 FGD5Q6ZNL6 1462 aa49.86■■■■■ 5.57
UBFD1-206ENST00000566669 RIMBP3CA6NJZ7 1639 aa49.83■■■■■ 5.57
UBFD1-206ENST00000566669 RIMBP3BA6NNM3 1639 aa49.83■■■■■ 5.57
UBFD1-206ENST00000566669 RIMBP3Q9UFD9 1639 aa49.83■■■■■ 5.57
UBFD1-206ENST00000566669 CUX1P39880 1505 aa49.8■■■■■ 5.56
UBFD1-206ENST00000566669 SUPT5HO00267 1087 aaKnown RBP49.8■■■■■ 5.56
UBFD1-206ENST00000566669 TDRD9Q8NDG6 1382 aaKnown RBP49.77■■■■■ 5.56
UBFD1-206ENST00000566669 ARHGEF11O15085 1522 aa49.75■■■■■ 5.56
UBFD1-206ENST00000566669 CHD1O14646 1710 aa49.71■■■■■ 5.55
UBFD1-206ENST00000566669 FBLN2P98095 1184 aa49.7■■■■■ 5.55
UBFD1-206ENST00000566669 MAGI1Q96QZ7 1491 aaPredicted RBP49.58■■■■■ 5.53
UBFD1-206ENST00000566669 GRIN2BQ13224 1484 aa49.57■■■■■ 5.53
UBFD1-206ENST00000566669 SNAPC4Q5SXM2 1469 aa49.56■■■■■ 5.52
UBFD1-206ENST00000566669 CHMP7Q8WUX9 453 aaPredicted RBP49.47■■■■■ 5.51
UBFD1-206ENST00000566669 ABCA10Q8WWZ4 1543 aa49.39■■■■■ 5.5
UBFD1-206ENST00000566669 GAPVD1Q14C86 1478 aa49.38■■■■■ 5.5
UBFD1-206ENST00000566669 SYNJ2O15056 1496 aa49.37■■■■■ 5.49
UBFD1-206ENST00000566669 CYB5RLQ6IPT4 315 aa49.37■■■■■ 5.49
UBFD1-206ENST00000566669 SYNJ1O43426 1573 aa49.35■■■■■ 5.49
UBFD1-206ENST00000566669 WRNQ14191 1432 aaPredicted RBP eCLIP49.28■■■■■ 5.48
UBFD1-206ENST00000566669 CLASP1Q7Z460 1538 aa49.27■■■■■ 5.48
UBFD1-206ENST00000566669 ARAP1Q96P48 1450 aa49.25■■■■■ 5.47
UBFD1-206ENST00000566669 PBRM1Q86U86 1689 aa49.22■■■■■ 5.47
UBFD1-206ENST00000566669 ABCA5Q8WWZ7 1642 aa49.21■■■■■ 5.47
UBFD1-206ENST00000566669 TOP2BQ02880 1626 aa49.14■■■■■ 5.46
UBFD1-206ENST00000566669 BIVM-ERCC5R4GMW8 1640 aa49.12■■■■■ 5.45
UBFD1-206ENST00000566669 GRIN2AQ12879 1464 aa48.88■■■■■ 5.42
UBFD1-206ENST00000566669 ADAMTS12P58397 1594 aa48.83■■■■■ 5.41
UBFD1-206ENST00000566669 FHAD1B1AJZ9 1412 aa48.82■■■■■ 5.41
UBFD1-206ENST00000566669 ERICH3Q5RHP9 1530 aa48.81■■■■■ 5.4
UBFD1-206ENST00000566669 TRHP20396 242 aaPredicted RBP48.78■■■■■ 5.4
UBFD1-206ENST00000566669 NUP160Q12769 1436 aa48.74■■■■■ 5.39
UBFD1-206ENST00000566669 CEP170Q5SW79 1584 aa48.59■■■■■ 5.37
UBFD1-206ENST00000566669 SHROOM2Q13796 1616 aa48.44■■■■■ 5.35
UBFD1-206ENST00000566669 ERCC6L2Q5T890 1561 aa48.34■■■■■ 5.33
UBFD1-206ENST00000566669 KIF27Q86VH2 1401 aa48.29■■■■■ 5.32
UBFD1-206ENST00000566669 JPH4Q96JJ6 628 aa48.24■■■■■ 5.31
UBFD1-206ENST00000566669 PRG4Q92954 1404 aaPredicted RBP48.21■■■■■ 5.31
UBFD1-206ENST00000566669 IGF1RP08069 1367 aa48.16■■■■■ 5.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms