RNA–Protein interactions for RNA: ENST00000587486.6

CALR-205, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 957 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-205ENST00000587486 NISCHQ9Y2I1 1504 aa41.29■■■■■ 4.2
CALR-205ENST00000587486 CCDC180Q9P1Z9 1646 aa36.84■■■■□ 3.49
CALR-205ENST00000587486 ABCC9O60706 1549 aa36.08■■■■□ 3.37
CALR-205ENST00000587486 RB1CC1Q8TDY2 1594 aa34.68■■■■□ 3.14
CALR-205ENST00000587486 NACADO15069 1562 aa34.62■■■■□ 3.13
CALR-205ENST00000587486 MYO15BQ96JP2 1530 aa34.42■■■■□ 3.1
CALR-205ENST00000587486 ZCCHC6Q5VYS8 1495 aaKnown RBP34.4■■■■□ 3.1
CALR-205ENST00000587486 DCAF8L2P0C7V8 631 aa34.29■■■■□ 3.08
CALR-205ENST00000587486 DCAF1Q9Y4B6 1507 aa34.2■■■■□ 3.07
CALR-205ENST00000587486 UNC13AQ9UPW8 1703 aa33.99■■■■□ 3.03
CALR-205ENST00000587486 BICRAQ9NZM4 1560 aa33.73■■■□□ 2.99
CALR-205ENST00000587486 PABPN1Q86U42 306 aaKnown RBP eCLIP33.63■■■□□ 2.97
CALR-205ENST00000587486 SCRIBQ14160 1630 aa33.53■■■□□ 2.96
CALR-205ENST00000587486 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
CALR-205ENST00000587486 DNAJC5BQ9UF47 199 aa33.29■■■□□ 2.92
CALR-205ENST00000587486 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
CALR-205ENST00000587486 CC2D2AQ9P2K1 1620 aa32.69■■■□□ 2.82
CALR-205ENST00000587486 CECR2Q9BXF3 1484 aa32.45■■■□□ 2.79
CALR-205ENST00000587486 SMARCA4P51532 1647 aa32.1■■■□□ 2.73
CALR-205ENST00000587486 BAZ1AQ9NRL2 1556 aaPredicted RBP32■■■□□ 2.71
CALR-205ENST00000587486 NCAPD3P42695 1498 aa31.95■■■□□ 2.7
CALR-205ENST00000587486 ATAD2BQ9ULI0 1458 aa31.93■■■□□ 2.7
CALR-205ENST00000587486 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
CALR-205ENST00000587486 PEG3Q9GZU2 1588 aa31.84■■■□□ 2.69
CALR-205ENST00000587486 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
CALR-205ENST00000587486 HMGXB3Q12766 1538 aa31.81■■■□□ 2.68
CALR-205ENST00000587486 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
CALR-205ENST00000587486 WIZO95785 1651 aa31.48■■■□□ 2.63
CALR-205ENST00000587486 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
CALR-205ENST00000587486 NESP48681 1621 aa31.22■■■□□ 2.59
CALR-205ENST00000587486 TOP2AP11388 1531 aaKnown RBP31.14■■■□□ 2.57
CALR-205ENST00000587486 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
CALR-205ENST00000587486 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
CALR-205ENST00000587486 CADPSQ9ULU8 1353 aa30.96■■■□□ 2.55
CALR-205ENST00000587486 CUX2O14529 1486 aa30.89■■■□□ 2.54
CALR-205ENST00000587486 KIF21AQ7Z4S6 1674 aa30.88■■■□□ 2.53
CALR-205ENST00000587486 THOC2Q8NI27 1593 aaKnown RBP30.87■■■□□ 2.53
CALR-205ENST00000587486 PDS5BQ9NTI5 1447 aa30.85■■■□□ 2.53
CALR-205ENST00000587486 CFTRP13569 1480 aa30.79■■■□□ 2.52
CALR-205ENST00000587486 CCDC88BA6NC98 1476 aa30.73■■■□□ 2.51
CALR-205ENST00000587486 FANCD2Q9BXW9 1451 aa30.62■■■□□ 2.49
CALR-205ENST00000587486 PRDM2Q13029 1718 aa30.61■■■□□ 2.49
CALR-205ENST00000587486 MRC2Q9UBG0 1479 aa30.6■■■□□ 2.49
CALR-205ENST00000587486 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
CALR-205ENST00000587486 WDR62O43379 1518 aa30.57■■■□□ 2.48
CALR-205ENST00000587486 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
CALR-205ENST00000587486 SUPT5HO00267 1087 aaKnown RBP30.26■■■□□ 2.43
CALR-205ENST00000587486 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
CALR-205ENST00000587486 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
CALR-205ENST00000587486 ABCC8Q09428 1581 aa30.07■■■□□ 2.4
CALR-205ENST00000587486 DNAJC5Q9H3Z4 198 aa30.06■■■□□ 2.4
CALR-205ENST00000587486 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
CALR-205ENST00000587486 TARBP1Q13395 1621 aaKnown RBP29.88■■■□□ 2.37
CALR-205ENST00000587486 POLA1P09884 1462 aaPredicted RBP29.87■■■□□ 2.37
CALR-205ENST00000587486 CUX1P39880 1505 aa29.87■■■□□ 2.37
CALR-205ENST00000587486 ZNF608Q9ULD9 1512 aaPredicted RBP29.86■■■□□ 2.37
CALR-205ENST00000587486 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
CALR-205ENST00000587486 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
CALR-205ENST00000587486 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
CALR-205ENST00000587486 SOGA1O94964 1423 aa29.67■■■□□ 2.34
CALR-205ENST00000587486 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
CALR-205ENST00000587486 AQRO60306 1485 aaKnown RBP eCLIP29.63■■■□□ 2.335e-11■■■■□ 20.1
CALR-205ENST00000587486 BIVM-ERCC5R4GMW8 1640 aa29.6■■■□□ 2.33
CALR-205ENST00000587486 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
CALR-205ENST00000587486 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
CALR-205ENST00000587486 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.32
CALR-205ENST00000587486 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
CALR-205ENST00000587486 ABCA10Q8WWZ4 1543 aa29.49■■■□□ 2.31
CALR-205ENST00000587486 OSCARQ8IYS5 282 aa29.45■■■□□ 2.31
CALR-205ENST00000587486 ABCA5Q8WWZ7 1642 aa29.44■■■□□ 2.3
CALR-205ENST00000587486 CHD1O14646 1710 aa29.42■■■□□ 2.3
CALR-205ENST00000587486 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
CALR-205ENST00000587486 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
CALR-205ENST00000587486 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
CALR-205ENST00000587486 GAPVD1Q14C86 1478 aa29.36■■■□□ 2.29
CALR-205ENST00000587486 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
CALR-205ENST00000587486 SYNJ2O15056 1496 aa29.23■■■□□ 2.27
CALR-205ENST00000587486 ADAMTS12P58397 1594 aa29.15■■■□□ 2.26
CALR-205ENST00000587486 FBLN2P98095 1184 aa29.15■■■□□ 2.26
CALR-205ENST00000587486 RIMBP3CA6NJZ7 1639 aa29.14■■■□□ 2.26
CALR-205ENST00000587486 RIMBP3BA6NNM3 1639 aa29.14■■■□□ 2.26
CALR-205ENST00000587486 RIMBP3Q9UFD9 1639 aa29.14■■■□□ 2.26
CALR-205ENST00000587486 CLASP1Q7Z460 1538 aa29.14■■■□□ 2.25
CALR-205ENST00000587486 ERICH3Q5RHP9 1530 aa29.13■■■□□ 2.25
CALR-205ENST00000587486 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
CALR-205ENST00000587486 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
CALR-205ENST00000587486 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
CALR-205ENST00000587486 FHAD1B1AJZ9 1412 aa29.02■■■□□ 2.24
CALR-205ENST00000587486 NUP160Q12769 1436 aa28.94■■■□□ 2.22
CALR-205ENST00000587486 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
CALR-205ENST00000587486 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
CALR-205ENST00000587486 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
CALR-205ENST00000587486 ARAP1Q96P48 1450 aa28.88■■■□□ 2.21
CALR-205ENST00000587486 IGF1RP08069 1367 aa28.85■■■□□ 2.21
CALR-205ENST00000587486 CUL7Q14999 1698 aa28.83■■■□□ 2.21
CALR-205ENST00000587486 SHROOM2Q13796 1616 aa28.79■■■□□ 2.2
CALR-205ENST00000587486 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
CALR-205ENST00000587486 ERCC6L2Q5T890 1561 aa28.71■■■□□ 2.19
CALR-205ENST00000587486 CYB5RLQ6IPT4 315 aa28.7■■■□□ 2.18
CALR-205ENST00000587486 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms