RNA–Protein interactions for RNA: ENST00000567264.1

UBFD1-208, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBFD1, Length 642 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-208ENST00000567264 NISCHQ9Y2I1 1504 aa53.85■■■■■ 6.21
UBFD1-208ENST00000567264 CCDC180Q9P1Z9 1646 aa47.59■■■■■ 5.21
UBFD1-208ENST00000567264 ABCC9O60706 1549 aa45.98■■■■■ 4.95
UBFD1-208ENST00000567264 ZCCHC6Q5VYS8 1495 aaKnown RBP44.99■■■■■ 4.79
UBFD1-208ENST00000567264 DCAF8L2P0C7V8 631 aa44.81■■■■■ 4.76
UBFD1-208ENST00000567264 NACADO15069 1562 aa44.6■■■■■ 4.73
UBFD1-208ENST00000567264 DCAF1Q9Y4B6 1507 aa44.58■■■■■ 4.73
UBFD1-208ENST00000567264 MYO15BQ96JP2 1530 aa44.52■■■■■ 4.72
UBFD1-208ENST00000567264 RB1CC1Q8TDY2 1594 aa44.52■■■■■ 4.72
UBFD1-208ENST00000567264 SCRIBQ14160 1630 aa43.51■■■■■ 4.56
UBFD1-208ENST00000567264 UNC13AQ9UPW8 1703 aa43.45■■■■■ 4.55
UBFD1-208ENST00000567264 BICRAQ9NZM4 1560 aa43.09■■■■■ 4.49
UBFD1-208ENST00000567264 PABPN1Q86U42 306 aaKnown RBP eCLIP43.08■■■■■ 4.49
UBFD1-208ENST00000567264 SHROOM4Q9ULL8 1493 aa42.98■■■■■ 4.47
UBFD1-208ENST00000567264 EIF4G1Q04637 1599 aaKnown RBP41.93■■■■■ 4.3
UBFD1-208ENST00000567264 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
UBFD1-208ENST00000567264 BAZ1AQ9NRL2 1556 aaPredicted RBP41.71■■■■■ 4.27
UBFD1-208ENST00000567264 SMARCA4P51532 1647 aa41.66■■■■■ 4.26
UBFD1-208ENST00000567264 CC2D2AQ9P2K1 1620 aa41.6■■■■■ 4.25
UBFD1-208ENST00000567264 DNAJC5BQ9UF47 199 aa41.56■■■■■ 4.24
UBFD1-208ENST00000567264 MROH2BQ7Z745 1585 aa41.5■■■■■ 4.23
UBFD1-208ENST00000567264 SMARCA2P51531 1590 aa41.27■■■■■ 4.2
UBFD1-208ENST00000567264 RSF1Q96T23 1441 aaPredicted RBP41.27■■■■■ 4.2
UBFD1-208ENST00000567264 ATAD2BQ9ULI0 1458 aa41.26■■■■■ 4.2
UBFD1-208ENST00000567264 PEG3Q9GZU2 1588 aa41.21■■■■■ 4.19
UBFD1-208ENST00000567264 NCAPD3P42695 1498 aa41.14■■■■■ 4.18
UBFD1-208ENST00000567264 WIZO95785 1651 aa41.1■■■■■ 4.17
UBFD1-208ENST00000567264 HMGXB3Q12766 1538 aa41■■■■■ 4.15
UBFD1-208ENST00000567264 BAZ1BQ9UIG0 1483 aaKnown RBP40.99■■■■■ 4.15
UBFD1-208ENST00000567264 SUPT5HO00267 1087 aaKnown RBP40.77■■■■■ 4.12
UBFD1-208ENST00000567264 TOP2AP11388 1531 aaKnown RBP40.72■■■■■ 4.11
UBFD1-208ENST00000567264 CCDC88BA6NC98 1476 aa40.22■■■■■ 4.03
UBFD1-208ENST00000567264 CADPSQ9ULU8 1353 aa39.99■■■■□ 3.99
UBFD1-208ENST00000567264 LAMC3Q9Y6N6 1575 aa39.97■■■■□ 3.99
UBFD1-208ENST00000567264 NESP48681 1621 aa39.95■■■■□ 3.99
UBFD1-208ENST00000567264 CFTRP13569 1480 aa39.88■■■■□ 3.97
UBFD1-208ENST00000567264 PDS5BQ9NTI5 1447 aa39.7■■■■□ 3.95
UBFD1-208ENST00000567264 PRDM2Q13029 1718 aa39.63■■■■□ 3.94
UBFD1-208ENST00000567264 ERCC6Q03468 1493 aa39.62■■■■□ 3.93
UBFD1-208ENST00000567264 FANCD2Q9BXW9 1451 aa39.54■■■■□ 3.92
UBFD1-208ENST00000567264 KIF21AQ7Z4S6 1674 aa39.51■■■■□ 3.91
UBFD1-208ENST00000567264 CEP164Q9UPV0 1460 aa39.44■■■■□ 3.9
UBFD1-208ENST00000567264 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
UBFD1-208ENST00000567264 THOC2Q8NI27 1593 aaKnown RBP39.21■■■■□ 3.87
UBFD1-208ENST00000567264 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
UBFD1-208ENST00000567264 WDR62O43379 1518 aa39.07■■■■□ 3.84
UBFD1-208ENST00000567264 ABCC8Q09428 1581 aa39.03■■■■□ 3.84
UBFD1-208ENST00000567264 DNMBPQ6XZF7 1577 aa38.99■■■■□ 3.83
UBFD1-208ENST00000567264 TOPBP1Q92547 1522 aa38.97■■■■□ 3.83
UBFD1-208ENST00000567264 WRNQ14191 1432 aaPredicted RBP eCLIP38.93■■■■□ 3.82
UBFD1-208ENST00000567264 CUX2O14529 1486 aa38.92■■■■□ 3.82
UBFD1-208ENST00000567264 CUX1P39880 1505 aa38.91■■■■□ 3.82
UBFD1-208ENST00000567264 SYNJ1O43426 1573 aa38.77■■■■□ 3.8
UBFD1-208ENST00000567264 TOP2BQ02880 1626 aa38.75■■■■□ 3.79
UBFD1-208ENST00000567264 BIVM-ERCC5R4GMW8 1640 aa38.74■■■■□ 3.79
UBFD1-208ENST00000567264 FGD5Q6ZNL6 1462 aa38.7■■■■□ 3.79
UBFD1-208ENST00000567264 POLA1P09884 1462 aaPredicted RBP38.68■■■■□ 3.78
UBFD1-208ENST00000567264 IFT140Q96RY7 1462 aa38.59■■■■□ 3.77
UBFD1-208ENST00000567264 SOGA1O94964 1423 aa38.55■■■■□ 3.76
UBFD1-208ENST00000567264 RAD54L2Q9Y4B4 1467 aa38.51■■■■□ 3.76
UBFD1-208ENST00000567264 TRIM41Q8WV44 630 aa38.49■■■■□ 3.75
UBFD1-208ENST00000567264 TARBP1Q13395 1621 aaKnown RBP38.47■■■■□ 3.75
UBFD1-208ENST00000567264 CHIC1Q5VXU3 224 aa38.39■■■■□ 3.74
UBFD1-208ENST00000567264 ABCA10Q8WWZ4 1543 aa38.33■■■■□ 3.73
UBFD1-208ENST00000567264 ZNF608Q9ULD9 1512 aaPredicted RBP38.33■■■■□ 3.73
UBFD1-208ENST00000567264 WDR97A6NE52 1622 aa38.31■■■■□ 3.72
UBFD1-208ENST00000567264 TDRD9Q8NDG6 1382 aaKnown RBP38.25■■■■□ 3.71
UBFD1-208ENST00000567264 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
UBFD1-208ENST00000567264 AQRO60306 1485 aaKnown RBP eCLIP38.21■■■■□ 3.716e-7■■■□□ 17.4
UBFD1-208ENST00000567264 ABCA5Q8WWZ7 1642 aa38.12■■■■□ 3.69
UBFD1-208ENST00000567264 GAPVD1Q14C86 1478 aa38.12■■■■□ 3.69
UBFD1-208ENST00000567264 KIF27Q86VH2 1401 aa38.08■■■■□ 3.69
UBFD1-208ENST00000567264 GRIN2BQ13224 1484 aa38.03■■■■□ 3.68
UBFD1-208ENST00000567264 PBRM1Q86U86 1689 aa37.98■■■■□ 3.67
UBFD1-208ENST00000567264 ERICH3Q5RHP9 1530 aa37.9■■■■□ 3.66
UBFD1-208ENST00000567264 SNAPC4Q5SXM2 1469 aa37.89■■■■□ 3.66
UBFD1-208ENST00000567264 RUSC2Q8N2Y8 1516 aa37.88■■■■□ 3.65
UBFD1-208ENST00000567264 MAGI1Q96QZ7 1491 aaPredicted RBP37.86■■■■□ 3.65
UBFD1-208ENST00000567264 IGF1RP08069 1367 aa37.8■■■■□ 3.64
UBFD1-208ENST00000567264 EEA1Q15075 1411 aa37.78■■■■□ 3.64
UBFD1-208ENST00000567264 ADAMTS12P58397 1594 aa37.73■■■■□ 3.63
UBFD1-208ENST00000567264 SYNJ2O15056 1496 aa37.71■■■■□ 3.63
UBFD1-208ENST00000567264 FHAD1B1AJZ9 1412 aa37.7■■■■□ 3.63
UBFD1-208ENST00000567264 CUL7Q14999 1698 aa37.69■■■■□ 3.62
UBFD1-208ENST00000567264 FBLN2P98095 1184 aa37.68■■■■□ 3.62
UBFD1-208ENST00000567264 FAM9AQ8IZU1 332 aaPredicted RBP37.68■■■■□ 3.62
UBFD1-208ENST00000567264 CHMP7Q8WUX9 453 aaPredicted RBP37.67■■■■□ 3.62
UBFD1-208ENST00000567264 CSRNP3Q8WYN3 585 aa37.63■■■■□ 3.61
UBFD1-208ENST00000567264 CARMIL1Q5VZK9 1371 aa37.62■■■■□ 3.61
UBFD1-208ENST00000567264 CHD1O14646 1710 aa37.61■■■■□ 3.61
UBFD1-208ENST00000567264 GRIN2AQ12879 1464 aa37.53■■■■□ 3.6
UBFD1-208ENST00000567264 PRXQ9BXM0 1461 aa37.47■■■■□ 3.59
UBFD1-208ENST00000567264 RAPGEF2Q9Y4G8 1499 aa37.47■■■■□ 3.59
UBFD1-208ENST00000567264 OSCARQ8IYS5 282 aa37.45■■■■□ 3.59
UBFD1-208ENST00000567264 NUP160Q12769 1436 aa37.32■■■■□ 3.56
UBFD1-208ENST00000567264 KIF21BO75037 1637 aa37.32■■■■□ 3.56
UBFD1-208ENST00000567264 CEP170Q5SW79 1584 aa37.3■■■■□ 3.56
UBFD1-208ENST00000567264 CLASP1Q7Z460 1538 aa37.2■■■■□ 3.55
UBFD1-208ENST00000567264 GOLGA3Q08378 1498 aa37.18■■■■□ 3.54
UBFD1-208ENST00000567264 EHMT2Q96KQ7 1210 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms