RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 NISCHQ9Y2I1 1504 aa26.61■■□□□ 1.85
TM9SF4-203ENST00000417389 CCDC180Q9P1Z9 1646 aa23.63■■□□□ 1.37
TM9SF4-203ENST00000417389 ABCC9O60706 1549 aa23.3■■□□□ 1.32
TM9SF4-203ENST00000417389 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
TM9SF4-203ENST00000417389 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.17
TM9SF4-203ENST00000417389 NACADO15069 1562 aa22.26■■□□□ 1.15
TM9SF4-203ENST00000417389 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
TM9SF4-203ENST00000417389 MYO15BQ96JP2 1530 aa22.04■■□□□ 1.12
TM9SF4-203ENST00000417389 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
TM9SF4-203ENST00000417389 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
TM9SF4-203ENST00000417389 UNC13AQ9UPW8 1703 aa21.74■■□□□ 1.07
TM9SF4-203ENST00000417389 SCRIBQ14160 1630 aa21.68■■□□□ 1.06
TM9SF4-203ENST00000417389 BICRAQ9NZM4 1560 aa21.58■■□□□ 1.05
TM9SF4-203ENST00000417389 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
TM9SF4-203ENST00000417389 SHROOM4Q9ULL8 1493 aa21.34■■□□□ 1.01
TM9SF4-203ENST00000417389 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
TM9SF4-203ENST00000417389 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
TM9SF4-203ENST00000417389 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
TM9SF4-203ENST00000417389 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
TM9SF4-203ENST00000417389 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
TM9SF4-203ENST00000417389 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
TM9SF4-203ENST00000417389 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
TM9SF4-203ENST00000417389 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
TM9SF4-203ENST00000417389 MROH2BQ7Z745 1585 aa20.53■□□□□ 0.88
TM9SF4-203ENST00000417389 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
TM9SF4-203ENST00000417389 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
TM9SF4-203ENST00000417389 PEG3Q9GZU2 1588 aa20.38■□□□□ 0.85
TM9SF4-203ENST00000417389 WIZO95785 1651 aa20.32■□□□□ 0.84
TM9SF4-203ENST00000417389 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
TM9SF4-203ENST00000417389 ERCC6Q03468 1493 aa20.14■□□□□ 0.81
TM9SF4-203ENST00000417389 NESP48681 1621 aa20.11■□□□□ 0.81
TM9SF4-203ENST00000417389 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
TM9SF4-203ENST00000417389 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
TM9SF4-203ENST00000417389 CADPSQ9ULU8 1353 aa19.98■□□□□ 0.79
TM9SF4-203ENST00000417389 PDS5BQ9NTI5 1447 aa19.94■□□□□ 0.78
TM9SF4-203ENST00000417389 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
TM9SF4-203ENST00000417389 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
TM9SF4-203ENST00000417389 KIF21AQ7Z4S6 1674 aa19.84■□□□□ 0.77
TM9SF4-203ENST00000417389 CUX2O14529 1486 aa19.82■□□□□ 0.76
TM9SF4-203ENST00000417389 CFTRP13569 1480 aa19.82■□□□□ 0.76
TM9SF4-203ENST00000417389 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
TM9SF4-203ENST00000417389 CEP164Q9UPV0 1460 aa19.77■□□□□ 0.76
TM9SF4-203ENST00000417389 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
TM9SF4-203ENST00000417389 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
TM9SF4-203ENST00000417389 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
TM9SF4-203ENST00000417389 WDR62O43379 1518 aa19.61■□□□□ 0.73
TM9SF4-203ENST00000417389 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
TM9SF4-203ENST00000417389 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
TM9SF4-203ENST00000417389 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
TM9SF4-203ENST00000417389 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
TM9SF4-203ENST00000417389 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
TM9SF4-203ENST00000417389 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
TM9SF4-203ENST00000417389 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
TM9SF4-203ENST00000417389 CUX1P39880 1505 aa19.25■□□□□ 0.67
TM9SF4-203ENST00000417389 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
TM9SF4-203ENST00000417389 SOGA1O94964 1423 aa19.24■□□□□ 0.67
TM9SF4-203ENST00000417389 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
TM9SF4-203ENST00000417389 RAD54L2Q9Y4B4 1467 aa19.22■□□□□ 0.67
TM9SF4-203ENST00000417389 WRNQ14191 1432 aaPredicted RBP eCLIP19.17■□□□□ 0.66
TM9SF4-203ENST00000417389 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
TM9SF4-203ENST00000417389 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.661e-7■■■■□ 22
TM9SF4-203ENST00000417389 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
TM9SF4-203ENST00000417389 TDRD9Q8NDG6 1382 aaKnown RBP19.15■□□□□ 0.66
TM9SF4-203ENST00000417389 SYNJ1O43426 1573 aa19.08■□□□□ 0.65
TM9SF4-203ENST00000417389 FBLN2P98095 1184 aa19.08■□□□□ 0.64
TM9SF4-203ENST00000417389 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
TM9SF4-203ENST00000417389 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
TM9SF4-203ENST00000417389 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
TM9SF4-203ENST00000417389 ABCA10Q8WWZ4 1543 aa19■□□□□ 0.63
TM9SF4-203ENST00000417389 WDR97A6NE52 1622 aa19■□□□□ 0.63
TM9SF4-203ENST00000417389 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
TM9SF4-203ENST00000417389 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
TM9SF4-203ENST00000417389 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
TM9SF4-203ENST00000417389 CHMP7Q8WUX9 453 aaPredicted RBP18.96■□□□□ 0.63
TM9SF4-203ENST00000417389 PBRM1Q86U86 1689 aa18.92■□□□□ 0.62
TM9SF4-203ENST00000417389 CHD1O14646 1710 aa18.91■□□□□ 0.62
TM9SF4-203ENST00000417389 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
TM9SF4-203ENST00000417389 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
TM9SF4-203ENST00000417389 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
TM9SF4-203ENST00000417389 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
TM9SF4-203ENST00000417389 KIF27Q86VH2 1401 aa18.79■□□□□ 0.6
TM9SF4-203ENST00000417389 ERICH3Q5RHP9 1530 aa18.78■□□□□ 0.6
TM9SF4-203ENST00000417389 FHAD1B1AJZ9 1412 aa18.76■□□□□ 0.59
TM9SF4-203ENST00000417389 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
TM9SF4-203ENST00000417389 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
TM9SF4-203ENST00000417389 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
TM9SF4-203ENST00000417389 RIMBP3CA6NJZ7 1639 aa18.7■□□□□ 0.58
TM9SF4-203ENST00000417389 RIMBP3BA6NNM3 1639 aa18.7■□□□□ 0.58
TM9SF4-203ENST00000417389 RIMBP3Q9UFD9 1639 aa18.7■□□□□ 0.58
TM9SF4-203ENST00000417389 IGF1RP08069 1367 aa18.68■□□□□ 0.58
TM9SF4-203ENST00000417389 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
TM9SF4-203ENST00000417389 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
TM9SF4-203ENST00000417389 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
TM9SF4-203ENST00000417389 CUL7Q14999 1698 aa18.61■□□□□ 0.57
TM9SF4-203ENST00000417389 NUP160Q12769 1436 aa18.61■□□□□ 0.57
TM9SF4-203ENST00000417389 CARMIL1Q5VZK9 1371 aa18.6■□□□□ 0.57
TM9SF4-203ENST00000417389 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
TM9SF4-203ENST00000417389 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
TM9SF4-203ENST00000417389 JPH4Q96JJ6 628 aa18.5■□□□□ 0.55
TM9SF4-203ENST00000417389 PRG4Q92954 1404 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms