RNA–Protein interactions for RNA: ENST00000544958.5

ARAP1-220, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 3

Gene ARAP1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-220ENST00000544958 NISCHQ9Y2I1 1504 aa34.11■■■■□ 3.05
ARAP1-220ENST00000544958 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
ARAP1-220ENST00000544958 ABCC9O60706 1549 aa29.61■■■□□ 2.33
ARAP1-220ENST00000544958 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
ARAP1-220ENST00000544958 NACADO15069 1562 aa28.54■■■□□ 2.16
ARAP1-220ENST00000544958 ZCCHC6Q5VYS8 1495 aaKnown RBP28.46■■■□□ 2.15
ARAP1-220ENST00000544958 DCAF8L2P0C7V8 631 aa28.43■■■□□ 2.14
ARAP1-220ENST00000544958 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
ARAP1-220ENST00000544958 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
ARAP1-220ENST00000544958 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
ARAP1-220ENST00000544958 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
ARAP1-220ENST00000544958 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
ARAP1-220ENST00000544958 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.014e-7■■□□□ 13.7
ARAP1-220ENST00000544958 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
ARAP1-220ENST00000544958 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
ARAP1-220ENST00000544958 EIF4G1Q04637 1599 aaKnown RBP26.93■■□□□ 1.9
ARAP1-220ENST00000544958 CC2D2AQ9P2K1 1620 aa26.8■■□□□ 1.88
ARAP1-220ENST00000544958 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
ARAP1-220ENST00000544958 SMARCA4P51532 1647 aa26.49■■□□□ 1.83
ARAP1-220ENST00000544958 BAZ1AQ9NRL2 1556 aaPredicted RBP26.49■■□□□ 1.83
ARAP1-220ENST00000544958 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
ARAP1-220ENST00000544958 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
ARAP1-220ENST00000544958 NCAPD3P42695 1498 aa26.27■■□□□ 1.8
ARAP1-220ENST00000544958 MROH2BQ7Z745 1585 aa26.26■■□□□ 1.79
ARAP1-220ENST00000544958 PEG3Q9GZU2 1588 aa26.22■■□□□ 1.79
ARAP1-220ENST00000544958 HMGXB3Q12766 1538 aa26.22■■□□□ 1.79
ARAP1-220ENST00000544958 BAZ1BQ9UIG0 1483 aaKnown RBP26.14■■□□□ 1.78
ARAP1-220ENST00000544958 WIZO95785 1651 aa25.99■■□□□ 1.75
ARAP1-220ENST00000544958 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
ARAP1-220ENST00000544958 TOP2AP11388 1531 aaKnown RBP25.78■■□□□ 1.72
ARAP1-220ENST00000544958 LAMC3Q9Y6N6 1575 aa25.64■■□□□ 1.69
ARAP1-220ENST00000544958 NESP48681 1621 aa25.6■■□□□ 1.69
ARAP1-220ENST00000544958 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
ARAP1-220ENST00000544958 CADPSQ9ULU8 1353 aa25.51■■□□□ 1.67
ARAP1-220ENST00000544958 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.66
ARAP1-220ENST00000544958 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
ARAP1-220ENST00000544958 CFTRP13569 1480 aa25.38■■□□□ 1.65
ARAP1-220ENST00000544958 KIF21AQ7Z4S6 1674 aa25.36■■□□□ 1.65
ARAP1-220ENST00000544958 SUPT5HO00267 1087 aaKnown RBP25.34■■□□□ 1.65
ARAP1-220ENST00000544958 CUX2O14529 1486 aa25.29■■□□□ 1.64
ARAP1-220ENST00000544958 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
ARAP1-220ENST00000544958 PRDM2Q13029 1718 aa25.27■■□□□ 1.64
ARAP1-220ENST00000544958 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
ARAP1-220ENST00000544958 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
ARAP1-220ENST00000544958 MRC2Q9UBG0 1479 aa25.2■■□□□ 1.62
ARAP1-220ENST00000544958 WDR62O43379 1518 aa25.11■■□□□ 1.61
ARAP1-220ENST00000544958 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
ARAP1-220ENST00000544958 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
ARAP1-220ENST00000544958 DNMBPQ6XZF7 1577 aa24.85■■□□□ 1.57
ARAP1-220ENST00000544958 TOPBP1Q92547 1522 aa24.85■■□□□ 1.57
ARAP1-220ENST00000544958 IFT140Q96RY7 1462 aa24.7■■□□□ 1.55
ARAP1-220ENST00000544958 CUX1P39880 1505 aa24.66■■□□□ 1.54
ARAP1-220ENST00000544958 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
ARAP1-220ENST00000544958 FGD5Q6ZNL6 1462 aa24.59■■□□□ 1.53
ARAP1-220ENST00000544958 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
ARAP1-220ENST00000544958 WRNQ14191 1432 aaPredicted RBP eCLIP24.54■■□□□ 1.52
ARAP1-220ENST00000544958 ZNF608Q9ULD9 1512 aaPredicted RBP24.52■■□□□ 1.52
ARAP1-220ENST00000544958 SOGA1O94964 1423 aa24.52■■□□□ 1.52
ARAP1-220ENST00000544958 EIF4G3O43432 1585 aaKnown RBP24.51■■□□□ 1.51
ARAP1-220ENST00000544958 BIVM-ERCC5R4GMW8 1640 aa24.5■■□□□ 1.51
ARAP1-220ENST00000544958 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
ARAP1-220ENST00000544958 TOP2BQ02880 1626 aa24.49■■□□□ 1.51
ARAP1-220ENST00000544958 SYNJ1O43426 1573 aa24.46■■□□□ 1.51
ARAP1-220ENST00000544958 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
ARAP1-220ENST00000544958 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.492e-8■■■■□ 23.2
ARAP1-220ENST00000544958 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
ARAP1-220ENST00000544958 TDRD9Q8NDG6 1382 aaKnown RBP24.34■■□□□ 1.49
ARAP1-220ENST00000544958 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
ARAP1-220ENST00000544958 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
ARAP1-220ENST00000544958 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
ARAP1-220ENST00000544958 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
ARAP1-220ENST00000544958 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
ARAP1-220ENST00000544958 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
ARAP1-220ENST00000544958 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
ARAP1-220ENST00000544958 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
ARAP1-220ENST00000544958 CHD1O14646 1710 aa24.17■■□□□ 1.46
ARAP1-220ENST00000544958 FBLN2P98095 1184 aa24.11■■□□□ 1.45
ARAP1-220ENST00000544958 SYNJ2O15056 1496 aa24.1■■□□□ 1.45
ARAP1-220ENST00000544958 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
ARAP1-220ENST00000544958 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
ARAP1-220ENST00000544958 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
ARAP1-220ENST00000544958 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
ARAP1-220ENST00000544958 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
ARAP1-220ENST00000544958 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
ARAP1-220ENST00000544958 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
ARAP1-220ENST00000544958 CUL7Q14999 1698 aa23.92■■□□□ 1.42
ARAP1-220ENST00000544958 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
ARAP1-220ENST00000544958 IGF1RP08069 1367 aa23.84■■□□□ 1.41
ARAP1-220ENST00000544958 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
ARAP1-220ENST00000544958 NUP160Q12769 1436 aa23.83■■□□□ 1.4
ARAP1-220ENST00000544958 RIMBP3CA6NJZ7 1639 aa23.82■■□□□ 1.4
ARAP1-220ENST00000544958 RIMBP3BA6NNM3 1639 aa23.82■■□□□ 1.4
ARAP1-220ENST00000544958 RIMBP3Q9UFD9 1639 aa23.82■■□□□ 1.4
ARAP1-220ENST00000544958 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
ARAP1-220ENST00000544958 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
ARAP1-220ENST00000544958 RUSC2Q8N2Y8 1516 aa23.72■■□□□ 1.39
ARAP1-220ENST00000544958 RAPGEF2Q9Y4G8 1499 aa23.65■■□□□ 1.38
ARAP1-220ENST00000544958 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
ARAP1-220ENST00000544958 EEA1Q15075 1411 aa23.64■■□□□ 1.37
ARAP1-220ENST00000544958 ARAP1Q96P48 1450 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 219 ms