RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 NISCHQ9Y2I1 1504 aa31.2■■■□□ 2.58
SLC6A8-201ENST00000253122 CCDC180Q9P1Z9 1646 aa26.93■■□□□ 1.9
SLC6A8-201ENST00000253122 SUPT5HO00267 1087 aaKnown RBP26.86■■□□□ 1.89
SLC6A8-201ENST00000253122 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
SLC6A8-201ENST00000253122 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
SLC6A8-201ENST00000253122 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
SLC6A8-201ENST00000253122 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
SLC6A8-201ENST00000253122 HRCP23327 699 aa26■■□□□ 1.75
SLC6A8-201ENST00000253122 PPARGC1BQ86YN6 1023 aaKnown RBP25.76■■□□□ 1.71
SLC6A8-201ENST00000253122 ABCC9O60706 1549 aa25.73■■□□□ 1.71
SLC6A8-201ENST00000253122 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
SLC6A8-201ENST00000253122 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
SLC6A8-201ENST00000253122 EHMT2Q96KQ7 1210 aa25.48■■□□□ 1.67
SLC6A8-201ENST00000253122 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
SLC6A8-201ENST00000253122 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
SLC6A8-201ENST00000253122 NACADO15069 1562 aa25.18■■□□□ 1.62
SLC6A8-201ENST00000253122 PELP1Q8IZL8 1130 aaKnown RBP25.13■■□□□ 1.61
SLC6A8-201ENST00000253122 SCRIBQ14160 1630 aa25.1■■□□□ 1.61
SLC6A8-201ENST00000253122 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
SLC6A8-201ENST00000253122 TRIM26Q12899 539 aaPredicted RBP25.05■■□□□ 1.6
SLC6A8-201ENST00000253122 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
SLC6A8-201ENST00000253122 ZEB1P37275 1124 aaPredicted RBP24.94■■□□□ 1.58
SLC6A8-201ENST00000253122 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
SLC6A8-201ENST00000253122 TTBK1Q5TCY1 1321 aaPredicted RBP24.66■■□□□ 1.54
SLC6A8-201ENST00000253122 CCER1Q8TC90 406 aaPredicted RBP24.58■■□□□ 1.53
SLC6A8-201ENST00000253122 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
SLC6A8-201ENST00000253122 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.54e-8■□□□□ 10.1
SLC6A8-201ENST00000253122 SCAF1Q9H7N4 1312 aaKnown RBP24.44■■□□□ 1.5
SLC6A8-201ENST00000253122 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
SLC6A8-201ENST00000253122 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.32■■□□□ 1.48
SLC6A8-201ENST00000253122 YTHDC1Q96MU7 727 aaKnown RBP24.3■■□□□ 1.48
SLC6A8-201ENST00000253122 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
SLC6A8-201ENST00000253122 GTF3C3Q9Y5Q9 886 aa24.21■■□□□ 1.47
SLC6A8-201ENST00000253122 MYT1Q01538 1121 aa24.18■■□□□ 1.46
SLC6A8-201ENST00000253122 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
SLC6A8-201ENST00000253122 MROH2BQ7Z745 1585 aa24.14■■□□□ 1.45
SLC6A8-201ENST00000253122 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.45
SLC6A8-201ENST00000253122 ACIN1Q9UKV3 1341 aaKnown RBP24.13■■□□□ 1.45
SLC6A8-201ENST00000253122 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
SLC6A8-201ENST00000253122 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
SLC6A8-201ENST00000253122 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
SLC6A8-201ENST00000253122 WIZO95785 1651 aa23.93■■□□□ 1.42
SLC6A8-201ENST00000253122 SMARCA4P51532 1647 aa23.91■■□□□ 1.42
SLC6A8-201ENST00000253122 UBTFP17480 764 aaKnown RBP23.77■■□□□ 1.4
SLC6A8-201ENST00000253122 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
SLC6A8-201ENST00000253122 TOP2AP11388 1531 aaKnown RBP23.69■■□□□ 1.38
SLC6A8-201ENST00000253122 APLP2Q06481 763 aa23.68■■□□□ 1.38
SLC6A8-201ENST00000253122 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
SLC6A8-201ENST00000253122 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
SLC6A8-201ENST00000253122 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
SLC6A8-201ENST00000253122 SMARCA2P51531 1590 aa23.56■■□□□ 1.36
SLC6A8-201ENST00000253122 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
SLC6A8-201ENST00000253122 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
SLC6A8-201ENST00000253122 EIF4G1Q04637 1599 aaKnown RBP23.44■■□□□ 1.34
SLC6A8-201ENST00000253122 PEG3Q9GZU2 1588 aa23.43■■□□□ 1.34
SLC6A8-201ENST00000253122 MIER1Q8N108 512 aa23.33■■□□□ 1.33
SLC6A8-201ENST00000253122 NCAPD3P42695 1498 aa23.25■■□□□ 1.31
SLC6A8-201ENST00000253122 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
SLC6A8-201ENST00000253122 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
SLC6A8-201ENST00000253122 BCANQ96GW7 911 aa23.14■■□□□ 1.29
SLC6A8-201ENST00000253122 ITGAEP38570 1179 aa23.09■■□□□ 1.29
SLC6A8-201ENST00000253122 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.289e-12■■■■□ 19.7
SLC6A8-201ENST00000253122 NEFLP07196 543 aa23.05■■□□□ 1.28
SLC6A8-201ENST00000253122 CC2D2AQ9P2K1 1620 aa23.05■■□□□ 1.28
SLC6A8-201ENST00000253122 CSRNP3Q8WYN3 585 aa23.02■■□□□ 1.28
SLC6A8-201ENST00000253122 ERICH6Q7L0X2 663 aa22.97■■□□□ 1.27
SLC6A8-201ENST00000253122 CEP162Q5TB80 1403 aa22.88■■□□□ 1.25
SLC6A8-201ENST00000253122 CADPSQ9ULU8 1353 aa22.83■■□□□ 1.24
SLC6A8-201ENST00000253122 EEA1Q15075 1411 aa22.82■■□□□ 1.24
SLC6A8-201ENST00000253122 CFTRP13569 1480 aa22.81■■□□□ 1.24
SLC6A8-201ENST00000253122 SOGA1O94964 1423 aa22.8■■□□□ 1.24
SLC6A8-201ENST00000253122 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
SLC6A8-201ENST00000253122 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
SLC6A8-201ENST00000253122 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
SLC6A8-201ENST00000253122 FKBP8Q14318 412 aa22.73■■□□□ 1.23
SLC6A8-201ENST00000253122 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
SLC6A8-201ENST00000253122 ANP32EQ9BTT0 268 aa22.68■■□□□ 1.22
SLC6A8-201ENST00000253122 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.21
SLC6A8-201ENST00000253122 TNIKQ9UKE5 1360 aa22.63■■□□□ 1.21
SLC6A8-201ENST00000253122 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
SLC6A8-201ENST00000253122 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.21
SLC6A8-201ENST00000253122 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.21
SLC6A8-201ENST00000253122 GOLGA3Q08378 1498 aa22.57■■□□□ 1.2
SLC6A8-201ENST00000253122 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
SLC6A8-201ENST00000253122 TSHZ2Q9NRE2 1034 aa22.54■■□□□ 1.2
SLC6A8-201ENST00000253122 CUX1P39880 1505 aa22.54■■□□□ 1.2
SLC6A8-201ENST00000253122 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
SLC6A8-201ENST00000253122 NESP48681 1621 aa22.52■■□□□ 1.2
SLC6A8-201ENST00000253122 KIF27Q86VH2 1401 aa22.52■■□□□ 1.2
SLC6A8-201ENST00000253122 TRIM52Q96A61 297 aa22.51■■□□□ 1.19
SLC6A8-201ENST00000253122 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
SLC6A8-201ENST00000253122 CLIP1P30622 1438 aa22.5■■□□□ 1.19
SLC6A8-201ENST00000253122 DNAJC5BQ9UF47 199 aa22.49■■□□□ 1.19
SLC6A8-201ENST00000253122 BCL11AQ9H165 835 aa22.49■■□□□ 1.19
SLC6A8-201ENST00000253122 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
SLC6A8-201ENST00000253122 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
SLC6A8-201ENST00000253122 FAM50AQ14320 339 aaKnown RBP22.46■■□□□ 1.19
SLC6A8-201ENST00000253122 ANP32CO43423 234 aa22.44■■□□□ 1.18
SLC6A8-201ENST00000253122 HIRIP3Q9BW71 556 aaPredicted RBP22.44■■□□□ 1.18
SLC6A8-201ENST00000253122 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms