RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 NISCHQ9Y2I1 1504 aa21.91■■□□□ 1.1
UBFD1-207ENST00000567212 SUPT5HO00267 1087 aaKnown RBP21.85■■□□□ 1.09
UBFD1-207ENST00000567212 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
UBFD1-207ENST00000567212 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
UBFD1-207ENST00000567212 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
UBFD1-207ENST00000567212 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
UBFD1-207ENST00000567212 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
UBFD1-207ENST00000567212 MYT1Q01538 1121 aa21.08■□□□□ 0.97
UBFD1-207ENST00000567212 CENPBP07199 599 aaPredicted RBP20.92■□□□□ 0.94
UBFD1-207ENST00000567212 HRCP23327 699 aa20.83■□□□□ 0.92
UBFD1-207ENST00000567212 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
UBFD1-207ENST00000567212 TTBK1Q5TCY1 1321 aaPredicted RBP20.74■□□□□ 0.91
UBFD1-207ENST00000567212 YTHDC1Q96MU7 727 aaKnown RBP20.73■□□□□ 0.91
UBFD1-207ENST00000567212 FAM9AQ8IZU1 332 aaPredicted RBP20.66■□□□□ 0.9
UBFD1-207ENST00000567212 ERICH6Q7L0X2 663 aa20.6■□□□□ 0.89
UBFD1-207ENST00000567212 ZEB1P37275 1124 aaPredicted RBP20.58■□□□□ 0.88
UBFD1-207ENST00000567212 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
UBFD1-207ENST00000567212 TRIM26Q12899 539 aaPredicted RBP20.15■□□□□ 0.82
UBFD1-207ENST00000567212 APLP2Q06481 763 aa20.08■□□□□ 0.81
UBFD1-207ENST00000567212 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.8
UBFD1-207ENST00000567212 NEFLP07196 543 aa20.03■□□□□ 0.8
UBFD1-207ENST00000567212 LOC105371045A0A1W2PR82 267 aa20.03■□□□□ 0.8
UBFD1-207ENST00000567212 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
UBFD1-207ENST00000567212 TRIM41Q8WV44 630 aa19.89■□□□□ 0.78
UBFD1-207ENST00000567212 DIEXFQ68CQ4 756 aaKnown RBP19.85■□□□□ 0.77
UBFD1-207ENST00000567212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
UBFD1-207ENST00000567212 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
UBFD1-207ENST00000567212 ACIN1Q9UKV3 1341 aaKnown RBP19.7■□□□□ 0.74
UBFD1-207ENST00000567212 BCANQ96GW7 911 aa19.65■□□□□ 0.74
UBFD1-207ENST00000567212 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
UBFD1-207ENST00000567212 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
UBFD1-207ENST00000567212 HNRNPUL2Q1KMD3 747 aaKnown RBP19.46■□□□□ 0.71
UBFD1-207ENST00000567212 NEUROD1Q13562 356 aa19.45■□□□□ 0.7
UBFD1-207ENST00000567212 RTL5Q5HYW3 569 aaPredicted RBP19.4■□□□□ 0.7
UBFD1-207ENST00000567212 CNGB1Q14028 1251 aaPredicted RBP19.33■□□□□ 0.68
UBFD1-207ENST00000567212 ATP1B4Q9UN42 357 aaPredicted RBP19.32■□□□□ 0.68
UBFD1-207ENST00000567212 DAXXQ9UER7 740 aaPredicted RBP19.31■□□□□ 0.68
UBFD1-207ENST00000567212 ITGAEP38570 1179 aa19.29■□□□□ 0.68
UBFD1-207ENST00000567212 EIF5BO60841 1220 aaKnown RBP19.19■□□□□ 0.66
UBFD1-207ENST00000567212 ZNF316A6NFI3 1004 aaPredicted RBP19.12■□□□□ 0.65
UBFD1-207ENST00000567212 POLR3GLQ9BT43 218 aa19.1■□□□□ 0.65
UBFD1-207ENST00000567212 CDK11AQ9UQ88 783 aaPredicted RBP19.05■□□□□ 0.64
UBFD1-207ENST00000567212 FKBP8Q14318 412 aa18.96■□□□□ 0.63
UBFD1-207ENST00000567212 BCL11AQ9H165 835 aa18.94■□□□□ 0.62
UBFD1-207ENST00000567212 NBR1Q14596 966 aa18.88■□□□□ 0.61
UBFD1-207ENST00000567212 ANP32EQ9BTT0 268 aa18.87■□□□□ 0.61
UBFD1-207ENST00000567212 CLSPNQ9HAW4 1339 aa18.81■□□□□ 0.6
UBFD1-207ENST00000567212 MIER1Q8N108 512 aa18.79■□□□□ 0.6
UBFD1-207ENST00000567212 NPM2Q86SE8 214 aaKnown RBP18.78■□□□□ 0.6
UBFD1-207ENST00000567212 ANP32CO43423 234 aa18.72■□□□□ 0.59
UBFD1-207ENST00000567212 ANP32AP39687 249 aaKnown RBP18.69■□□□□ 0.58
UBFD1-207ENST00000567212 TRIM52Q96A61 297 aa18.62■□□□□ 0.57
UBFD1-207ENST00000567212 RTN4Q9NQC3 1192 aaKnown RBP18.62■□□□□ 0.57
UBFD1-207ENST00000567212 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
UBFD1-207ENST00000567212 ABCC9O60706 1549 aa18.53■□□□□ 0.56
UBFD1-207ENST00000567212 DDX10Q13206 875 aaKnown RBP18.5■□□□□ 0.55
UBFD1-207ENST00000567212 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
UBFD1-207ENST00000567212 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
UBFD1-207ENST00000567212 GLIPR1L2Q4G1C9 344 aa18.49■□□□□ 0.55
UBFD1-207ENST00000567212 ARXQ96QS3 562 aa18.48■□□□□ 0.55
UBFD1-207ENST00000567212 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
UBFD1-207ENST00000567212 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
UBFD1-207ENST00000567212 DCAF1Q9Y4B6 1507 aa18.47■□□□□ 0.55
UBFD1-207ENST00000567212 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
UBFD1-207ENST00000567212 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
UBFD1-207ENST00000567212 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
UBFD1-207ENST00000567212 PABPN1Q86U42 306 aaKnown RBP eCLIP18.38■□□□□ 0.53
UBFD1-207ENST00000567212 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
UBFD1-207ENST00000567212 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
UBFD1-207ENST00000567212 HIRIP3Q9BW71 556 aaPredicted RBP18.3■□□□□ 0.52
UBFD1-207ENST00000567212 CCDC136Q96JN2 1154 aa18.28■□□□□ 0.52
UBFD1-207ENST00000567212 DEKP35659 375 aaKnown RBP18.27■□□□□ 0.52
UBFD1-207ENST00000567212 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
UBFD1-207ENST00000567212 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
UBFD1-207ENST00000567212 SALL2Q9Y467 1007 aaPredicted RBP18.23■□□□□ 0.51
UBFD1-207ENST00000567212 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
UBFD1-207ENST00000567212 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
UBFD1-207ENST00000567212 TSHZ2Q9NRE2 1034 aa18.19■□□□□ 0.5
UBFD1-207ENST00000567212 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
UBFD1-207ENST00000567212 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
UBFD1-207ENST00000567212 NEFMP07197 916 aa18.14■□□□□ 0.49
UBFD1-207ENST00000567212 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
UBFD1-207ENST00000567212 NOP58Q9Y2X3 529 aaKnown RBP18.05■□□□□ 0.48
UBFD1-207ENST00000567212 ANP32BQ92688 251 aaKnown RBP18.03■□□□□ 0.48
UBFD1-207ENST00000567212 MRS2Q9HD23 443 aa18■□□□□ 0.47
UBFD1-207ENST00000567212 B4GALNT3Q6L9W6 998 aa17.99■□□□□ 0.47
UBFD1-207ENST00000567212 NAP1L5Q96NT1 182 aaPredicted RBP17.98■□□□□ 0.47
UBFD1-207ENST00000567212 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
UBFD1-207ENST00000567212 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
UBFD1-207ENST00000567212 ARID4BQ4LE39 1312 aaPredicted RBP17.93■□□□□ 0.46
UBFD1-207ENST00000567212 ERICH6BQ5W0A0 696 aa17.93■□□□□ 0.46
UBFD1-207ENST00000567212 P3H3Q8IVL6 736 aa17.89■□□□□ 0.45
UBFD1-207ENST00000567212 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
UBFD1-207ENST00000567212 UPF2Q9HAU5 1272 aaKnown RBP17.87■□□□□ 0.45
UBFD1-207ENST00000567212 TMC1Q8TDI8 760 aa17.86■□□□□ 0.45
UBFD1-207ENST00000567212 CCDC180Q9P1Z9 1646 aa17.84■□□□□ 0.45
UBFD1-207ENST00000567212 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
UBFD1-207ENST00000567212 PPM1GO15355 546 aaPredicted RBP17.83■□□□□ 0.45
UBFD1-207ENST00000567212 TRIM44Q96DX7 344 aaPredicted RBP17.83■□□□□ 0.45
UBFD1-207ENST00000567212 PRKCSHP14314 528 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms