RNA–Protein interactions for RNA: ENST00000543868.1

ARAP1-218, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 2

Gene ARAP1, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-218ENST00000543868 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
ARAP1-218ENST00000543868 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
ARAP1-218ENST00000543868 ABCC9O60706 1549 aa33.38■■■□□ 2.93
ARAP1-218ENST00000543868 RB1CC1Q8TDY2 1594 aa32.14■■■□□ 2.74
ARAP1-218ENST00000543868 NACADO15069 1562 aa32.11■■■□□ 2.73
ARAP1-218ENST00000543868 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
ARAP1-218ENST00000543868 MYO15BQ96JP2 1530 aa31.92■■■□□ 2.7
ARAP1-218ENST00000543868 ZCCHC6Q5VYS8 1495 aaKnown RBP31.91■■■□□ 2.7
ARAP1-218ENST00000543868 DCAF1Q9Y4B6 1507 aa31.75■■■□□ 2.67
ARAP1-218ENST00000543868 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.62
ARAP1-218ENST00000543868 PABPN1Q86U42 306 aaKnown RBP eCLIP31.19■■■□□ 2.584e-7■■□□□ 13.7
ARAP1-218ENST00000543868 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
ARAP1-218ENST00000543868 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
ARAP1-218ENST00000543868 SHROOM4Q9ULL8 1493 aa30.86■■■□□ 2.53
ARAP1-218ENST00000543868 DNAJC5BQ9UF47 199 aa30.74■■■□□ 2.51
ARAP1-218ENST00000543868 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.45
ARAP1-218ENST00000543868 CC2D2AQ9P2K1 1620 aa30.22■■■□□ 2.43
ARAP1-218ENST00000543868 CECR2Q9BXF3 1484 aa30.02■■■□□ 2.4
ARAP1-218ENST00000543868 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
ARAP1-218ENST00000543868 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
ARAP1-218ENST00000543868 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
ARAP1-218ENST00000543868 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
ARAP1-218ENST00000543868 SMARCA2P51531 1590 aa29.58■■■□□ 2.33
ARAP1-218ENST00000543868 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
ARAP1-218ENST00000543868 PEG3Q9GZU2 1588 aa29.48■■■□□ 2.31
ARAP1-218ENST00000543868 HMGXB3Q12766 1538 aa29.45■■■□□ 2.31
ARAP1-218ENST00000543868 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
ARAP1-218ENST00000543868 WIZO95785 1651 aa29.2■■■□□ 2.26
ARAP1-218ENST00000543868 RSF1Q96T23 1441 aaPredicted RBP29.19■■■□□ 2.26
ARAP1-218ENST00000543868 TOP2AP11388 1531 aaKnown RBP28.89■■■□□ 2.21
ARAP1-218ENST00000543868 NESP48681 1621 aa28.88■■■□□ 2.21
ARAP1-218ENST00000543868 LAMC3Q9Y6N6 1575 aa28.84■■■□□ 2.21
ARAP1-218ENST00000543868 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
ARAP1-218ENST00000543868 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
ARAP1-218ENST00000543868 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
ARAP1-218ENST00000543868 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
ARAP1-218ENST00000543868 CFTRP13569 1480 aa28.57■■■□□ 2.16
ARAP1-218ENST00000543868 CUX2O14529 1486 aa28.54■■■□□ 2.16
ARAP1-218ENST00000543868 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
ARAP1-218ENST00000543868 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.15
ARAP1-218ENST00000543868 FANCD2Q9BXW9 1451 aa28.39■■■□□ 2.13
ARAP1-218ENST00000543868 SUPT5HO00267 1087 aaKnown RBP28.38■■■□□ 2.13
ARAP1-218ENST00000543868 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
ARAP1-218ENST00000543868 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
ARAP1-218ENST00000543868 PRDM2Q13029 1718 aa28.33■■■□□ 2.13
ARAP1-218ENST00000543868 WDR62O43379 1518 aa28.25■■■□□ 2.11
ARAP1-218ENST00000543868 URB2Q14146 1524 aaKnown RBP28.11■■■□□ 2.09
ARAP1-218ENST00000543868 ABCC8Q09428 1581 aa27.99■■■□□ 2.07
ARAP1-218ENST00000543868 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
ARAP1-218ENST00000543868 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
ARAP1-218ENST00000543868 IFT140Q96RY7 1462 aa27.79■■■□□ 2.04
ARAP1-218ENST00000543868 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
ARAP1-218ENST00000543868 CUX1P39880 1505 aa27.7■■■□□ 2.02
ARAP1-218ENST00000543868 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
ARAP1-218ENST00000543868 TARBP1Q13395 1621 aaKnown RBP27.65■■■□□ 2.02
ARAP1-218ENST00000543868 ZNF608Q9ULD9 1512 aaPredicted RBP27.64■■■□□ 2.02
ARAP1-218ENST00000543868 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
ARAP1-218ENST00000543868 SOGA1O94964 1423 aa27.6■■■□□ 2.01
ARAP1-218ENST00000543868 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
ARAP1-218ENST00000543868 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
ARAP1-218ENST00000543868 WRNQ14191 1432 aaPredicted RBP eCLIP27.51■■□□□ 1.99
ARAP1-218ENST00000543868 AQRO60306 1485 aaKnown RBP eCLIP27.49■■□□□ 1.992e-8■■■■□ 23.2
ARAP1-218ENST00000543868 TOP2BQ02880 1626 aa27.46■■□□□ 1.99
ARAP1-218ENST00000543868 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
ARAP1-218ENST00000543868 WDR97A6NE52 1622 aa27.45■■□□□ 1.98
ARAP1-218ENST00000543868 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
ARAP1-218ENST00000543868 SYNJ1O43426 1573 aa27.42■■□□□ 1.98
ARAP1-218ENST00000543868 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
ARAP1-218ENST00000543868 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
ARAP1-218ENST00000543868 GRIN2BQ13224 1484 aa27.28■■□□□ 1.96
ARAP1-218ENST00000543868 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
ARAP1-218ENST00000543868 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
ARAP1-218ENST00000543868 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
ARAP1-218ENST00000543868 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
ARAP1-218ENST00000543868 CHD1O14646 1710 aa27.19■■□□□ 1.94
ARAP1-218ENST00000543868 PBRM1Q86U86 1689 aa27.19■■□□□ 1.94
ARAP1-218ENST00000543868 FBLN2P98095 1184 aa27.16■■□□□ 1.94
ARAP1-218ENST00000543868 CHMP7Q8WUX9 453 aaPredicted RBP27.11■■□□□ 1.93
ARAP1-218ENST00000543868 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
ARAP1-218ENST00000543868 ERICH3Q5RHP9 1530 aa27.04■■□□□ 1.92
ARAP1-218ENST00000543868 ADAMTS12P58397 1594 aa26.97■■□□□ 1.91
ARAP1-218ENST00000543868 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
ARAP1-218ENST00000543868 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
ARAP1-218ENST00000543868 CLASP1Q7Z460 1538 aa26.91■■□□□ 1.9
ARAP1-218ENST00000543868 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
ARAP1-218ENST00000543868 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
ARAP1-218ENST00000543868 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
ARAP1-218ENST00000543868 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
ARAP1-218ENST00000543868 ARHGEF11O15085 1522 aa26.88■■□□□ 1.89
ARAP1-218ENST00000543868 IGF1RP08069 1367 aa26.87■■□□□ 1.89
ARAP1-218ENST00000543868 TRIM41Q8WV44 630 aa26.83■■□□□ 1.89
ARAP1-218ENST00000543868 NUP160Q12769 1436 aa26.82■■□□□ 1.88
ARAP1-218ENST00000543868 CUL7Q14999 1698 aa26.77■■□□□ 1.88
ARAP1-218ENST00000543868 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
ARAP1-218ENST00000543868 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.86
ARAP1-218ENST00000543868 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
ARAP1-218ENST00000543868 ARAP1Q96P48 1450 aa26.66■■□□□ 1.86
ARAP1-218ENST00000543868 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
ARAP1-218ENST00000543868 SHROOM2Q13796 1616 aa26.62■■□□□ 1.85
ARAP1-218ENST00000543868 JPH4Q96JJ6 628 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms