RNA–Protein interactions for RNA: ENST00000542596.5

ARAP1-216, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5

Gene ARAP1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-216ENST00000542596 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
ARAP1-216ENST00000542596 CCDC180Q9P1Z9 1646 aa32.18■■■□□ 2.74
ARAP1-216ENST00000542596 ABCC9O60706 1549 aa31.82■■■□□ 2.68
ARAP1-216ENST00000542596 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
ARAP1-216ENST00000542596 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
ARAP1-216ENST00000542596 NACADO15069 1562 aa30.41■■■□□ 2.46
ARAP1-216ENST00000542596 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
ARAP1-216ENST00000542596 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
ARAP1-216ENST00000542596 DCAF1Q9Y4B6 1507 aa29.88■■■□□ 2.37
ARAP1-216ENST00000542596 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.351e-6■■□□□ 11.7
ARAP1-216ENST00000542596 UNC13AQ9UPW8 1703 aa29.68■■■□□ 2.34
ARAP1-216ENST00000542596 DNAJC5BQ9UF47 199 aa29.5■■■□□ 2.31
ARAP1-216ENST00000542596 BICRAQ9NZM4 1560 aa29.5■■■□□ 2.31
ARAP1-216ENST00000542596 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
ARAP1-216ENST00000542596 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
ARAP1-216ENST00000542596 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
ARAP1-216ENST00000542596 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
ARAP1-216ENST00000542596 CECR2Q9BXF3 1484 aa28.65■■■□□ 2.18
ARAP1-216ENST00000542596 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
ARAP1-216ENST00000542596 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
ARAP1-216ENST00000542596 BAZ1AQ9NRL2 1556 aaPredicted RBP28.03■■■□□ 2.08
ARAP1-216ENST00000542596 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
ARAP1-216ENST00000542596 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
ARAP1-216ENST00000542596 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
ARAP1-216ENST00000542596 MROH2BQ7Z745 1585 aa27.82■■■□□ 2.04
ARAP1-216ENST00000542596 PEG3Q9GZU2 1588 aa27.79■■■□□ 2.04
ARAP1-216ENST00000542596 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
ARAP1-216ENST00000542596 ERCC6Q03468 1493 aa27.51■■□□□ 1.99
ARAP1-216ENST00000542596 WIZO95785 1651 aa27.48■■□□□ 1.99
ARAP1-216ENST00000542596 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
ARAP1-216ENST00000542596 NESP48681 1621 aa27.42■■□□□ 1.98
ARAP1-216ENST00000542596 LAMC3Q9Y6N6 1575 aa27.35■■□□□ 1.97
ARAP1-216ENST00000542596 CUX2O14529 1486 aa27.29■■□□□ 1.96
ARAP1-216ENST00000542596 CADPSQ9ULU8 1353 aa27.27■■□□□ 1.96
ARAP1-216ENST00000542596 PDS5BQ9NTI5 1447 aa27.25■■□□□ 1.95
ARAP1-216ENST00000542596 TOP2AP11388 1531 aaKnown RBP27.19■■□□□ 1.94
ARAP1-216ENST00000542596 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
ARAP1-216ENST00000542596 THOC2Q8NI27 1593 aaKnown RBP27.01■■□□□ 1.92
ARAP1-216ENST00000542596 CFTRP13569 1480 aa27■■□□□ 1.91
ARAP1-216ENST00000542596 CCDC88BA6NC98 1476 aa26.92■■□□□ 1.9
ARAP1-216ENST00000542596 FANCD2Q9BXW9 1451 aa26.92■■□□□ 1.9
ARAP1-216ENST00000542596 MRC2Q9UBG0 1479 aa26.92■■□□□ 1.9
ARAP1-216ENST00000542596 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
ARAP1-216ENST00000542596 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
ARAP1-216ENST00000542596 WDR62O43379 1518 aa26.79■■□□□ 1.88
ARAP1-216ENST00000542596 PRDM2Q13029 1718 aa26.68■■□□□ 1.86
ARAP1-216ENST00000542596 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
ARAP1-216ENST00000542596 URB2Q14146 1524 aaKnown RBP26.62■■□□□ 1.85
ARAP1-216ENST00000542596 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
ARAP1-216ENST00000542596 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
ARAP1-216ENST00000542596 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
ARAP1-216ENST00000542596 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
ARAP1-216ENST00000542596 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
ARAP1-216ENST00000542596 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
ARAP1-216ENST00000542596 POLA1P09884 1462 aaPredicted RBP26.18■■□□□ 1.78
ARAP1-216ENST00000542596 SOGA1O94964 1423 aa26.16■■□□□ 1.78
ARAP1-216ENST00000542596 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
ARAP1-216ENST00000542596 CUX1P39880 1505 aa26.1■■□□□ 1.77
ARAP1-216ENST00000542596 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.772e-8■■■■□ 23.2
ARAP1-216ENST00000542596 RAD54L2Q9Y4B4 1467 aa26.09■■□□□ 1.77
ARAP1-216ENST00000542596 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.77
ARAP1-216ENST00000542596 EIF4G3O43432 1585 aaKnown RBP26.06■■□□□ 1.76
ARAP1-216ENST00000542596 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
ARAP1-216ENST00000542596 FBLN2P98095 1184 aa25.95■■□□□ 1.74
ARAP1-216ENST00000542596 WDR97A6NE52 1622 aa25.94■■□□□ 1.74
ARAP1-216ENST00000542596 WRNQ14191 1432 aaPredicted RBP eCLIP25.9■■□□□ 1.74
ARAP1-216ENST00000542596 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
ARAP1-216ENST00000542596 TRIM41Q8WV44 630 aa25.85■■□□□ 1.73
ARAP1-216ENST00000542596 ABCA10Q8WWZ4 1543 aa25.83■■□□□ 1.73
ARAP1-216ENST00000542596 CHMP7Q8WUX9 453 aaPredicted RBP25.83■■□□□ 1.73
ARAP1-216ENST00000542596 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
ARAP1-216ENST00000542596 GAPVD1Q14C86 1478 aa25.81■■□□□ 1.72
ARAP1-216ENST00000542596 SNAPC4Q5SXM2 1469 aa25.8■■□□□ 1.72
ARAP1-216ENST00000542596 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
ARAP1-216ENST00000542596 CHD1O14646 1710 aa25.79■■□□□ 1.72
ARAP1-216ENST00000542596 BIVM-ERCC5R4GMW8 1640 aa25.78■■□□□ 1.72
ARAP1-216ENST00000542596 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
ARAP1-216ENST00000542596 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
ARAP1-216ENST00000542596 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
ARAP1-216ENST00000542596 PBRM1Q86U86 1689 aa25.67■■□□□ 1.7
ARAP1-216ENST00000542596 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
ARAP1-216ENST00000542596 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
ARAP1-216ENST00000542596 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
ARAP1-216ENST00000542596 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
ARAP1-216ENST00000542596 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
ARAP1-216ENST00000542596 ERICH3Q5RHP9 1530 aa25.53■■□□□ 1.68
ARAP1-216ENST00000542596 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
ARAP1-216ENST00000542596 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
ARAP1-216ENST00000542596 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
ARAP1-216ENST00000542596 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
ARAP1-216ENST00000542596 KIF27Q86VH2 1401 aa25.41■■□□□ 1.66
ARAP1-216ENST00000542596 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
ARAP1-216ENST00000542596 NUP160Q12769 1436 aa25.37■■□□□ 1.65
ARAP1-216ENST00000542596 IGF1RP08069 1367 aa25.35■■□□□ 1.65
ARAP1-216ENST00000542596 CEP170Q5SW79 1584 aa25.31■■□□□ 1.64
ARAP1-216ENST00000542596 JPH4Q96JJ6 628 aa25.25■■□□□ 1.63
ARAP1-216ENST00000542596 CUL7Q14999 1698 aa25.21■■□□□ 1.63
ARAP1-216ENST00000542596 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
ARAP1-216ENST00000542596 SHROOM2Q13796 1616 aa25.17■■□□□ 1.62
ARAP1-216ENST00000542596 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms