RNA–Protein interactions for RNA: ENST00000478777.5

PNISR-207, Transcript of PNN interacting serine and arginine rich protein, humanhuman

TSL 2

Gene PNISR, Length 2,422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNISR-207ENST00000478777 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
PNISR-207ENST00000478777 CCDC180Q9P1Z9 1646 aa16.34■□□□□ 0.21
PNISR-207ENST00000478777 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
PNISR-207ENST00000478777 ZCCHC6Q5VYS8 1495 aaKnown RBP16.22■□□□□ 0.19
PNISR-207ENST00000478777 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
PNISR-207ENST00000478777 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
PNISR-207ENST00000478777 DCAF1Q9Y4B6 1507 aa15.76■□□□□ 0.11
PNISR-207ENST00000478777 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
PNISR-207ENST00000478777 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
PNISR-207ENST00000478777 ABCC9O60706 1549 aa15.29■□□□□ 0.04
PNISR-207ENST00000478777 SCRIBQ14160 1630 aa15.27■□□□□ 0.04
PNISR-207ENST00000478777 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
PNISR-207ENST00000478777 NACADO15069 1562 aa15.11■□□□□ 0.01
PNISR-207ENST00000478777 LOC105371045A0A1W2PR82 267 aa15.1■□□□□ 0.01
PNISR-207ENST00000478777 PCGF6Q9BYE7 350 aa15.05■□□□□ -0
PNISR-207ENST00000478777 HRCP23327 699 aa15.04■□□□□ -0
PNISR-207ENST00000478777 RB1CC1Q8TDY2 1594 aa15.01□□□□□ -0.01
PNISR-207ENST00000478777 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
PNISR-207ENST00000478777 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
PNISR-207ENST00000478777 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
PNISR-207ENST00000478777 WIZO95785 1651 aa14.83□□□□□ -0.04
PNISR-207ENST00000478777 TRIM26Q12899 539 aaPredicted RBP14.8□□□□□ -0.04
PNISR-207ENST00000478777 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
PNISR-207ENST00000478777 BAZ1AQ9NRL2 1556 aaPredicted RBP14.74□□□□□ -0.05
PNISR-207ENST00000478777 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
PNISR-207ENST00000478777 UNC13AQ9UPW8 1703 aa14.65□□□□□ -0.06
PNISR-207ENST00000478777 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
PNISR-207ENST00000478777 SMARCA4P51532 1647 aa14.62□□□□□ -0.07
PNISR-207ENST00000478777 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
PNISR-207ENST00000478777 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
PNISR-207ENST00000478777 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
PNISR-207ENST00000478777 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
PNISR-207ENST00000478777 ABCC8Q09428 1581 aa14.48□□□□□ -0.09
PNISR-207ENST00000478777 ZEB1P37275 1124 aaPredicted RBP14.46□□□□□ -0.09
PNISR-207ENST00000478777 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
PNISR-207ENST00000478777 BICRAQ9NZM4 1560 aa14.46□□□□□ -0.09
PNISR-207ENST00000478777 SOGA1O94964 1423 aa14.35□□□□□ -0.11
PNISR-207ENST00000478777 PEG3Q9GZU2 1588 aa14.35□□□□□ -0.11
PNISR-207ENST00000478777 EEA1Q15075 1411 aa14.29□□□□□ -0.12
PNISR-207ENST00000478777 CSRNP3Q8WYN3 585 aa14.29□□□□□ -0.12
PNISR-207ENST00000478777 RUSC2Q8N2Y8 1516 aa14.28□□□□□ -0.12
PNISR-207ENST00000478777 TNIKQ9UKE5 1360 aa14.27□□□□□ -0.13
PNISR-207ENST00000478777 CEP162Q5TB80 1403 aa14.27□□□□□ -0.13
PNISR-207ENST00000478777 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
PNISR-207ENST00000478777 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
PNISR-207ENST00000478777 UBTFP17480 764 aaKnown RBP14.22□□□□□ -0.13
PNISR-207ENST00000478777 BAZ1BQ9UIG0 1483 aaKnown RBP14.2□□□□□ -0.14
PNISR-207ENST00000478777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
PNISR-207ENST00000478777 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
PNISR-207ENST00000478777 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
PNISR-207ENST00000478777 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.14
PNISR-207ENST00000478777 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
PNISR-207ENST00000478777 CEP164Q9UPV0 1460 aa14.1□□□□□ -0.15
PNISR-207ENST00000478777 KIF21BO75037 1637 aa14.09□□□□□ -0.15
PNISR-207ENST00000478777 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
PNISR-207ENST00000478777 CLIP1P30622 1438 aa14.01□□□□□ -0.17
PNISR-207ENST00000478777 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
PNISR-207ENST00000478777 NCAPD3P42695 1498 aa13.99□□□□□ -0.17
PNISR-207ENST00000478777 HMGXB3Q12766 1538 aa13.97□□□□□ -0.17
PNISR-207ENST00000478777 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
PNISR-207ENST00000478777 VPS8Q8N3P4 1428 aa13.95□□□□□ -0.18
PNISR-207ENST00000478777 RANGAP1P46060 587 aaPredicted RBP13.91□□□□□ -0.18
PNISR-207ENST00000478777 APLP2Q06481 763 aa13.9□□□□□ -0.18
PNISR-207ENST00000478777 CUX1P39880 1505 aa13.88□□□□□ -0.19
PNISR-207ENST00000478777 PRXQ9BXM0 1461 aa13.88□□□□□ -0.19
PNISR-207ENST00000478777 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
PNISR-207ENST00000478777 ERICH3Q5RHP9 1530 aa13.87□□□□□ -0.19
PNISR-207ENST00000478777 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
PNISR-207ENST00000478777 CFTRP13569 1480 aa13.86□□□□□ -0.19
PNISR-207ENST00000478777 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
PNISR-207ENST00000478777 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
PNISR-207ENST00000478777 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
PNISR-207ENST00000478777 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
PNISR-207ENST00000478777 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
PNISR-207ENST00000478777 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
PNISR-207ENST00000478777 KANK4Q5T7N3 995 aaPredicted RBP13.72□□□□□ -0.21
PNISR-207ENST00000478777 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
PNISR-207ENST00000478777 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
PNISR-207ENST00000478777 IGF1RP08069 1367 aa13.68□□□□□ -0.22
PNISR-207ENST00000478777 CUX2O14529 1486 aa13.68□□□□□ -0.22
PNISR-207ENST00000478777 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
PNISR-207ENST00000478777 CENPBP07199 599 aaPredicted RBP13.65□□□□□ -0.22
PNISR-207ENST00000478777 FGD5Q6ZNL6 1462 aa13.63□□□□□ -0.23
PNISR-207ENST00000478777 RRBP1Q9P2E9 1410 aaKnown RBP13.63□□□□□ -0.23
PNISR-207ENST00000478777 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
PNISR-207ENST00000478777 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
PNISR-207ENST00000478777 CARMIL1Q5VZK9 1371 aa13.62□□□□□ -0.23
PNISR-207ENST00000478777 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
PNISR-207ENST00000478777 CCNB3Q8WWL7 1395 aa13.57□□□□□ -0.24
PNISR-207ENST00000478777 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
PNISR-207ENST00000478777 MIER1Q8N108 512 aa13.57□□□□□ -0.24
PNISR-207ENST00000478777 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
PNISR-207ENST00000478777 MAP3K1Q13233 1512 aa13.53□□□□□ -0.24
PNISR-207ENST00000478777 TIAM1Q13009 1591 aa13.53□□□□□ -0.24
PNISR-207ENST00000478777 ITGAEP38570 1179 aa13.51□□□□□ -0.25
PNISR-207ENST00000478777 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
PNISR-207ENST00000478777 DNMBPQ6XZF7 1577 aa13.51□□□□□ -0.25
PNISR-207ENST00000478777 YTHDC1Q96MU7 727 aaKnown RBP13.5□□□□□ -0.25
PNISR-207ENST00000478777 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
PNISR-207ENST00000478777 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms