RNA–Protein interactions for RNA: ENST00000474393.5

TMCO3-207, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2 BASIC

Gene TMCO3, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-207ENST00000474393 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
TMCO3-207ENST00000474393 CCDC180Q9P1Z9 1646 aa27.48■■□□□ 1.99
TMCO3-207ENST00000474393 ZCCHC6Q5VYS8 1495 aaKnown RBP26.82■■□□□ 1.88
TMCO3-207ENST00000474393 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
TMCO3-207ENST00000474393 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
TMCO3-207ENST00000474393 DCAF1Q9Y4B6 1507 aa26.23■■□□□ 1.79
TMCO3-207ENST00000474393 ABCC9O60706 1549 aa25.8■■□□□ 1.72
TMCO3-207ENST00000474393 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
TMCO3-207ENST00000474393 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
TMCO3-207ENST00000474393 NACADO15069 1562 aa25.52■■□□□ 1.68
TMCO3-207ENST00000474393 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
TMCO3-207ENST00000474393 RB1CC1Q8TDY2 1594 aa25.23■■□□□ 1.63
TMCO3-207ENST00000474393 HRCP23327 699 aa25.13■■□□□ 1.61
TMCO3-207ENST00000474393 PPARGC1BQ86YN6 1023 aaKnown RBP25.04■■□□□ 1.6
TMCO3-207ENST00000474393 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
TMCO3-207ENST00000474393 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
TMCO3-207ENST00000474393 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
TMCO3-207ENST00000474393 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
TMCO3-207ENST00000474393 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
TMCO3-207ENST00000474393 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
TMCO3-207ENST00000474393 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
TMCO3-207ENST00000474393 WIZO95785 1651 aa24.5■■□□□ 1.51
TMCO3-207ENST00000474393 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
TMCO3-207ENST00000474393 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
TMCO3-207ENST00000474393 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
TMCO3-207ENST00000474393 LOC105371045A0A1W2PR82 267 aa24.28■■□□□ 1.48
TMCO3-207ENST00000474393 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
TMCO3-207ENST00000474393 TRIM41Q8WV44 630 aa24.07■■□□□ 1.44
TMCO3-207ENST00000474393 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
TMCO3-207ENST00000474393 SMARCA2P51531 1590 aa24■■□□□ 1.43
TMCO3-207ENST00000474393 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
TMCO3-207ENST00000474393 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
TMCO3-207ENST00000474393 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
TMCO3-207ENST00000474393 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
TMCO3-207ENST00000474393 TRIM26Q12899 539 aaPredicted RBP23.86■■□□□ 1.41
TMCO3-207ENST00000474393 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
TMCO3-207ENST00000474393 PELP1Q8IZL8 1130 aaKnown RBP23.79■■□□□ 1.4
TMCO3-207ENST00000474393 FAM9AQ8IZU1 332 aaPredicted RBP23.75■■□□□ 1.39
TMCO3-207ENST00000474393 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
TMCO3-207ENST00000474393 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
TMCO3-207ENST00000474393 NCAPD3P42695 1498 aa23.58■■□□□ 1.37
TMCO3-207ENST00000474393 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
TMCO3-207ENST00000474393 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
TMCO3-207ENST00000474393 ZEB1P37275 1124 aaPredicted RBP23.44■■□□□ 1.34
TMCO3-207ENST00000474393 SOGA1O94964 1423 aa23.34■■□□□ 1.33
TMCO3-207ENST00000474393 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
TMCO3-207ENST00000474393 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
TMCO3-207ENST00000474393 CC2D2AQ9P2K1 1620 aa23.29■■□□□ 1.32
TMCO3-207ENST00000474393 EEA1Q15075 1411 aa23.26■■□□□ 1.31
TMCO3-207ENST00000474393 RUSC2Q8N2Y8 1516 aa23.24■■□□□ 1.31
TMCO3-207ENST00000474393 ACIN1Q9UKV3 1341 aaKnown RBP23.2■■□□□ 1.31
TMCO3-207ENST00000474393 CSRNP3Q8WYN3 585 aa23.2■■□□□ 1.3
TMCO3-207ENST00000474393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.19■■□□□ 1.3
TMCO3-207ENST00000474393 CFTRP13569 1480 aa23.19■■□□□ 1.3
TMCO3-207ENST00000474393 GTF3C3Q9Y5Q9 886 aa23.18■■□□□ 1.3
TMCO3-207ENST00000474393 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
TMCO3-207ENST00000474393 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
TMCO3-207ENST00000474393 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
TMCO3-207ENST00000474393 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
TMCO3-207ENST00000474393 TTBK1Q5TCY1 1321 aaPredicted RBP23.04■■□□□ 1.28
TMCO3-207ENST00000474393 CCER1Q8TC90 406 aaPredicted RBP23.03■■□□□ 1.28
TMCO3-207ENST00000474393 TNIKQ9UKE5 1360 aa23.03■■□□□ 1.28
TMCO3-207ENST00000474393 CUX1P39880 1505 aa23.03■■□□□ 1.28
TMCO3-207ENST00000474393 GOLGA3Q08378 1498 aa23.02■■□□□ 1.28
TMCO3-207ENST00000474393 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
TMCO3-207ENST00000474393 CEP162Q5TB80 1403 aa22.98■■□□□ 1.27
TMCO3-207ENST00000474393 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
TMCO3-207ENST00000474393 KIF21BO75037 1637 aa22.95■■□□□ 1.26
TMCO3-207ENST00000474393 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
TMCO3-207ENST00000474393 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
TMCO3-207ENST00000474393 CENPBP07199 599 aaPredicted RBP22.85■■□□□ 1.25
TMCO3-207ENST00000474393 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
TMCO3-207ENST00000474393 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
TMCO3-207ENST00000474393 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
TMCO3-207ENST00000474393 NESP48681 1621 aa22.78■■□□□ 1.24
TMCO3-207ENST00000474393 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
TMCO3-207ENST00000474393 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
TMCO3-207ENST00000474393 ERICH3Q5RHP9 1530 aa22.71■■□□□ 1.23
TMCO3-207ENST00000474393 CLIP1P30622 1438 aa22.71■■□□□ 1.23
TMCO3-207ENST00000474393 DNAJC5BQ9UF47 199 aa22.7■■□□□ 1.22
TMCO3-207ENST00000474393 LAMC3Q9Y6N6 1575 aa22.7■■□□□ 1.22
TMCO3-207ENST00000474393 CUX2O14529 1486 aa22.68■■□□□ 1.22
TMCO3-207ENST00000474393 MYT1Q01538 1121 aa22.67■■□□□ 1.22
TMCO3-207ENST00000474393 DNMBPQ6XZF7 1577 aa22.65■■□□□ 1.22
TMCO3-207ENST00000474393 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
TMCO3-207ENST00000474393 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
TMCO3-207ENST00000474393 IGF1RP08069 1367 aa22.56■■□□□ 1.2
TMCO3-207ENST00000474393 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
TMCO3-207ENST00000474393 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
TMCO3-207ENST00000474393 VPS8Q8N3P4 1428 aa22.54■■□□□ 1.2
TMCO3-207ENST00000474393 RAD54L2Q9Y4B4 1467 aa22.52■■□□□ 1.2
TMCO3-207ENST00000474393 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
TMCO3-207ENST00000474393 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
TMCO3-207ENST00000474393 CARMIL1Q5VZK9 1371 aa22.47■■□□□ 1.19
TMCO3-207ENST00000474393 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
TMCO3-207ENST00000474393 MIER1Q8N108 512 aa22.44■■□□□ 1.18
TMCO3-207ENST00000474393 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
TMCO3-207ENST00000474393 APLP2Q06481 763 aa22.41■■□□□ 1.18
TMCO3-207ENST00000474393 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
TMCO3-207ENST00000474393 WDR97A6NE52 1622 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms