RNA–Protein interactions for RNA: ENST00000602495.1

XIST-208, X inactive specific transcript, humanhuman

TSL 4

Gene XIST, Length 827 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-208ENST00000602495 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
XIST-208ENST00000602495 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
XIST-208ENST00000602495 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
XIST-208ENST00000602495 ABCC9O60706 1549 aa16.41■□□□□ 0.22
XIST-208ENST00000602495 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
XIST-208ENST00000602495 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
XIST-208ENST00000602495 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
XIST-208ENST00000602495 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
XIST-208ENST00000602495 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
XIST-208ENST00000602495 RB1CC1Q8TDY2 1594 aa15.55■□□□□ 0.08
XIST-208ENST00000602495 NACADO15069 1562 aa15.47■□□□□ 0.07
XIST-208ENST00000602495 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
XIST-208ENST00000602495 MYO15BQ96JP2 1530 aa15.26■□□□□ 0.03
XIST-208ENST00000602495 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
XIST-208ENST00000602495 UNC13AQ9UPW8 1703 aa15.12■□□□□ 0.01
XIST-208ENST00000602495 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
XIST-208ENST00000602495 FOXD1Q16676 465 aa15.08■□□□□ 0
XIST-208ENST00000602495 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
XIST-208ENST00000602495 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
XIST-208ENST00000602495 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
XIST-208ENST00000602495 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
XIST-208ENST00000602495 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
XIST-208ENST00000602495 CC2D2AQ9P2K1 1620 aa14.77□□□□□ -0.04
XIST-208ENST00000602495 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
XIST-208ENST00000602495 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
XIST-208ENST00000602495 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
XIST-208ENST00000602495 ADRA2BP18089 450 aa14.35□□□□□ -0.11
XIST-208ENST00000602495 DNAJC5Q9H3Z4 198 aa14.29□□□□□ -0.12
XIST-208ENST00000602495 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
XIST-208ENST00000602495 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
XIST-208ENST00000602495 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
XIST-208ENST00000602495 PIAS4Q8N2W9 510 aaPredicted RBP14.17□□□□□ -0.14
XIST-208ENST00000602495 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
XIST-208ENST00000602495 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
XIST-208ENST00000602495 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
XIST-208ENST00000602495 CUX2O14529 1486 aa14.12□□□□□ -0.15
XIST-208ENST00000602495 NESP48681 1621 aa14.1□□□□□ -0.15
XIST-208ENST00000602495 BAZ1BQ9UIG0 1483 aaKnown RBP14.1□□□□□ -0.15
XIST-208ENST00000602495 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
XIST-208ENST00000602495 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
XIST-208ENST00000602495 MSH5O43196 834 aa13.96□□□□□ -0.17
XIST-208ENST00000602495 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
XIST-208ENST00000602495 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
XIST-208ENST00000602495 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
XIST-208ENST00000602495 WIZO95785 1651 aa13.85□□□□□ -0.19
XIST-208ENST00000602495 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
XIST-208ENST00000602495 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
XIST-208ENST00000602495 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
XIST-208ENST00000602495 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.21
XIST-208ENST00000602495 CFTRP13569 1480 aa13.73□□□□□ -0.21
XIST-208ENST00000602495 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
XIST-208ENST00000602495 WDR62O43379 1518 aa13.7□□□□□ -0.22
XIST-208ENST00000602495 CEP164Q9UPV0 1460 aa13.7□□□□□ -0.22
XIST-208ENST00000602495 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
XIST-208ENST00000602495 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
XIST-208ENST00000602495 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
XIST-208ENST00000602495 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
XIST-208ENST00000602495 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
XIST-208ENST00000602495 IFT140Q96RY7 1462 aa13.46□□□□□ -0.25
XIST-208ENST00000602495 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
XIST-208ENST00000602495 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
XIST-208ENST00000602495 ZNF608Q9ULD9 1512 aaPredicted RBP13.44□□□□□ -0.26
XIST-208ENST00000602495 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
XIST-208ENST00000602495 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
XIST-208ENST00000602495 AQRO60306 1485 aaKnown RBP eCLIP13.37□□□□□ -0.27
XIST-208ENST00000602495 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
XIST-208ENST00000602495 FBLN2P98095 1184 aa13.34□□□□□ -0.27
XIST-208ENST00000602495 SOGA1O94964 1423 aa13.32□□□□□ -0.28
XIST-208ENST00000602495 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
XIST-208ENST00000602495 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
XIST-208ENST00000602495 POLA1P09884 1462 aaPredicted RBP13.3□□□□□ -0.28
XIST-208ENST00000602495 RAD54L2Q9Y4B4 1467 aa13.3□□□□□ -0.28
XIST-208ENST00000602495 TARBP1Q13395 1621 aaKnown RBP13.29□□□□□ -0.28
XIST-208ENST00000602495 SUPT5HO00267 1087 aaKnown RBP13.28□□□□□ -0.28
XIST-208ENST00000602495 RIMBP3CA6NJZ7 1639 aa13.27□□□□□ -0.29
XIST-208ENST00000602495 RIMBP3BA6NNM3 1639 aa13.27□□□□□ -0.29
XIST-208ENST00000602495 RIMBP3Q9UFD9 1639 aa13.27□□□□□ -0.29
XIST-208ENST00000602495 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
XIST-208ENST00000602495 ARHGEF11O15085 1522 aa13.24□□□□□ -0.29
XIST-208ENST00000602495 CHMP7Q8WUX9 453 aaPredicted RBP13.24□□□□□ -0.29
XIST-208ENST00000602495 FGD5Q6ZNL6 1462 aa13.22□□□□□ -0.29
XIST-208ENST00000602495 CUX1P39880 1505 aa13.2□□□□□ -0.3
XIST-208ENST00000602495 KCNA4P22459 653 aa13.19□□□□□ -0.3
XIST-208ENST00000602495 PPP4R3CPQ6ZMV5 832 aa13.17□□□□□ -0.3
XIST-208ENST00000602495 CHD1O14646 1710 aa13.16□□□□□ -0.3
XIST-208ENST00000602495 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
XIST-208ENST00000602495 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
XIST-208ENST00000602495 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
XIST-208ENST00000602495 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
XIST-208ENST00000602495 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
XIST-208ENST00000602495 MAGI1Q96QZ7 1491 aaPredicted RBP13.12□□□□□ -0.31
XIST-208ENST00000602495 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
XIST-208ENST00000602495 WDR97A6NE52 1622 aa13.11□□□□□ -0.31
XIST-208ENST00000602495 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
XIST-208ENST00000602495 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
XIST-208ENST00000602495 CLASP1Q7Z460 1538 aa13.07□□□□□ -0.32
XIST-208ENST00000602495 WRNQ14191 1432 aaPredicted RBP eCLIP13.06□□□□□ -0.32
XIST-208ENST00000602495 MAPK8IP2Q13387 824 aaPredicted RBP13.05□□□□□ -0.32
XIST-208ENST00000602495 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
XIST-208ENST00000602495 ABCA5Q8WWZ7 1642 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms