RNA–Protein interactions for RNA: ENST00000532304.5

CLUHP3-205, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best)

Gene CLUHP3, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-205ENST00000532304 NISCHQ9Y2I1 1504 aa36.54■■■■□ 3.44
CLUHP3-205ENST00000532304 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
CLUHP3-205ENST00000532304 ABCC9O60706 1549 aa31.51■■■□□ 2.64
CLUHP3-205ENST00000532304 DCAF8L2P0C7V8 631 aa30.51■■■□□ 2.47
CLUHP3-205ENST00000532304 ZCCHC6Q5VYS8 1495 aaKnown RBP30.48■■■□□ 2.47
CLUHP3-205ENST00000532304 RB1CC1Q8TDY2 1594 aa30.4■■■□□ 2.46
CLUHP3-205ENST00000532304 NACADO15069 1562 aa30.39■■■□□ 2.46
CLUHP3-205ENST00000532304 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
CLUHP3-205ENST00000532304 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
CLUHP3-205ENST00000532304 UNC13AQ9UPW8 1703 aa29.76■■■□□ 2.35
CLUHP3-205ENST00000532304 SCRIBQ14160 1630 aa29.62■■■□□ 2.33
CLUHP3-205ENST00000532304 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
CLUHP3-205ENST00000532304 BICRAQ9NZM4 1560 aa29.45■■■□□ 2.31
CLUHP3-205ENST00000532304 SHROOM4Q9ULL8 1493 aa29.13■■■□□ 2.25
CLUHP3-205ENST00000532304 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
CLUHP3-205ENST00000532304 EIF4G1Q04637 1599 aaKnown RBP28.68■■■□□ 2.18
CLUHP3-205ENST00000532304 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
CLUHP3-205ENST00000532304 CECR2Q9BXF3 1484 aa28.45■■■□□ 2.14
CLUHP3-205ENST00000532304 SMARCA4P51532 1647 aa28.33■■■□□ 2.13
CLUHP3-205ENST00000532304 BAZ1AQ9NRL2 1556 aaPredicted RBP28.32■■■□□ 2.12
CLUHP3-205ENST00000532304 MROH2BQ7Z745 1585 aa28.17■■■□□ 2.1
CLUHP3-205ENST00000532304 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
CLUHP3-205ENST00000532304 SMARCA2P51531 1590 aa28.08■■■□□ 2.09
CLUHP3-205ENST00000532304 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
CLUHP3-205ENST00000532304 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
CLUHP3-205ENST00000532304 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
CLUHP3-205ENST00000532304 RSF1Q96T23 1441 aaPredicted RBP27.91■■■□□ 2.06
CLUHP3-205ENST00000532304 WIZO95785 1651 aa27.91■■■□□ 2.06
CLUHP3-205ENST00000532304 BAZ1BQ9UIG0 1483 aaKnown RBP27.9■■■□□ 2.06
CLUHP3-205ENST00000532304 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
CLUHP3-205ENST00000532304 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
CLUHP3-205ENST00000532304 NESP48681 1621 aa27.33■■□□□ 1.97
CLUHP3-205ENST00000532304 LAMC3Q9Y6N6 1575 aa27.29■■□□□ 1.96
CLUHP3-205ENST00000532304 CCDC88BA6NC98 1476 aa27.28■■□□□ 1.96
CLUHP3-205ENST00000532304 CADPSQ9ULU8 1353 aa27.23■■□□□ 1.95
CLUHP3-205ENST00000532304 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
CLUHP3-205ENST00000532304 CFTRP13569 1480 aa27.12■■□□□ 1.93
CLUHP3-205ENST00000532304 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
CLUHP3-205ENST00000532304 KIF21AQ7Z4S6 1674 aa27.05■■□□□ 1.92
CLUHP3-205ENST00000532304 PRDM2Q13029 1718 aa27■■□□□ 1.91
CLUHP3-205ENST00000532304 FANCD2Q9BXW9 1451 aa26.94■■□□□ 1.9
CLUHP3-205ENST00000532304 CEP164Q9UPV0 1460 aa26.89■■□□□ 1.9
CLUHP3-205ENST00000532304 THOC2Q8NI27 1593 aaKnown RBP26.86■■□□□ 1.89
CLUHP3-205ENST00000532304 MRC2Q9UBG0 1479 aa26.79■■□□□ 1.88
CLUHP3-205ENST00000532304 CUX2O14529 1486 aa26.74■■□□□ 1.87
CLUHP3-205ENST00000532304 WDR62O43379 1518 aa26.7■■□□□ 1.86
CLUHP3-205ENST00000532304 URB2Q14146 1524 aaKnown RBP26.65■■□□□ 1.86
CLUHP3-205ENST00000532304 TOPBP1Q92547 1522 aa26.54■■□□□ 1.84
CLUHP3-205ENST00000532304 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
CLUHP3-205ENST00000532304 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
CLUHP3-205ENST00000532304 CUX1P39880 1505 aa26.42■■□□□ 1.82
CLUHP3-205ENST00000532304 WRNQ14191 1432 aaPredicted RBP eCLIP26.34■■□□□ 1.81
CLUHP3-205ENST00000532304 POLA1P09884 1462 aaPredicted RBP26.32■■□□□ 1.8
CLUHP3-205ENST00000532304 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
CLUHP3-205ENST00000532304 IFT140Q96RY7 1462 aa26.3■■□□□ 1.8
CLUHP3-205ENST00000532304 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
CLUHP3-205ENST00000532304 TOP2BQ02880 1626 aa26.26■■□□□ 1.79
CLUHP3-205ENST00000532304 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
CLUHP3-205ENST00000532304 TARBP1Q13395 1621 aaKnown RBP26.23■■□□□ 1.79
CLUHP3-205ENST00000532304 SOGA1O94964 1423 aa26.22■■□□□ 1.79
CLUHP3-205ENST00000532304 RAD54L2Q9Y4B4 1467 aa26.22■■□□□ 1.79
CLUHP3-205ENST00000532304 ZNF608Q9ULD9 1512 aaPredicted RBP26.18■■□□□ 1.78
CLUHP3-205ENST00000532304 EIF4G3O43432 1585 aaKnown RBP26.11■■□□□ 1.77
CLUHP3-205ENST00000532304 WDR97A6NE52 1622 aa26.09■■□□□ 1.77
CLUHP3-205ENST00000532304 AQRO60306 1485 aaKnown RBP eCLIP26.07■■□□□ 1.767e-7■■■■□ 19.8
CLUHP3-205ENST00000532304 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
CLUHP3-205ENST00000532304 ABCA10Q8WWZ4 1543 aa26.04■■□□□ 1.76
CLUHP3-205ENST00000532304 ABCA5Q8WWZ7 1642 aa25.93■■□□□ 1.74
CLUHP3-205ENST00000532304 GAPVD1Q14C86 1478 aa25.93■■□□□ 1.74
CLUHP3-205ENST00000532304 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
CLUHP3-205ENST00000532304 TRIM41Q8WV44 630 aa25.89■■□□□ 1.73
CLUHP3-205ENST00000532304 GRIN2BQ13224 1484 aa25.88■■□□□ 1.73
CLUHP3-205ENST00000532304 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
CLUHP3-205ENST00000532304 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
CLUHP3-205ENST00000532304 CHD1O14646 1710 aa25.76■■□□□ 1.72
CLUHP3-205ENST00000532304 KIF27Q86VH2 1401 aa25.76■■□□□ 1.71
CLUHP3-205ENST00000532304 FBLN2P98095 1184 aa25.75■■□□□ 1.71
CLUHP3-205ENST00000532304 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
CLUHP3-205ENST00000532304 SYNJ2O15056 1496 aa25.7■■□□□ 1.7
CLUHP3-205ENST00000532304 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
CLUHP3-205ENST00000532304 OSCARQ8IYS5 282 aa25.69■■□□□ 1.7
CLUHP3-205ENST00000532304 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
CLUHP3-205ENST00000532304 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
CLUHP3-205ENST00000532304 DNAJC5Q9H3Z4 198 aa25.65■■□□□ 1.7
CLUHP3-205ENST00000532304 FHAD1B1AJZ9 1412 aa25.62■■□□□ 1.69
CLUHP3-205ENST00000532304 IGF1RP08069 1367 aa25.61■■□□□ 1.69
CLUHP3-205ENST00000532304 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
CLUHP3-205ENST00000532304 CUL7Q14999 1698 aa25.58■■□□□ 1.69
CLUHP3-205ENST00000532304 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
CLUHP3-205ENST00000532304 CARMIL1Q5VZK9 1371 aa25.48■■□□□ 1.67
CLUHP3-205ENST00000532304 CLASP1Q7Z460 1538 aa25.43■■□□□ 1.66
CLUHP3-205ENST00000532304 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
CLUHP3-205ENST00000532304 NUP160Q12769 1436 aa25.41■■□□□ 1.66
CLUHP3-205ENST00000532304 EEA1Q15075 1411 aa25.4■■□□□ 1.66
CLUHP3-205ENST00000532304 FAM9AQ8IZU1 332 aaPredicted RBP25.38■■□□□ 1.65
CLUHP3-205ENST00000532304 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
CLUHP3-205ENST00000532304 CSRNP3Q8WYN3 585 aa25.35■■□□□ 1.65
CLUHP3-205ENST00000532304 PRXQ9BXM0 1461 aa25.3■■□□□ 1.64
CLUHP3-205ENST00000532304 ARHGEF11O15085 1522 aa25.29■■□□□ 1.64
CLUHP3-205ENST00000532304 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms