RNA–Protein interactions for RNA: ENST00000160740.7

CIC-201, Transcript of capicua transcriptional repressor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CIC, Length 6,111 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIC-201ENST00000160740 DCAF8L2P0C7V8 631 aa42.72■■■■■ 4.43
CIC-201ENST00000160740 SUPT5HO00267 1087 aaKnown RBP40.68■■■■■ 4.1
CIC-201ENST00000160740 EHMT2Q96KQ7 1210 aa39.89■■■■□ 3.98
CIC-201ENST00000160740 SHROOM4Q9ULL8 1493 aa39.72■■■■□ 3.95
CIC-201ENST00000160740 PELP1Q8IZL8 1130 aaKnown RBP39.66■■■■□ 3.94
CIC-201ENST00000160740 NISCHQ9Y2I1 1504 aa39.12■■■■□ 3.85
CIC-201ENST00000160740 APLP2Q06481 763 aa39.01■■■■□ 3.83
CIC-201ENST00000160740 TTBK1Q5TCY1 1321 aaPredicted RBP38.59■■■■□ 3.77
CIC-201ENST00000160740 FAM9AQ8IZU1 332 aaPredicted RBP38.55■■■■□ 3.76
CIC-201ENST00000160740 PCGF6Q9BYE7 350 aa38.37■■■■□ 3.73
CIC-201ENST00000160740 ERICH6Q7L0X2 663 aa38.23■■■■□ 3.71
CIC-201ENST00000160740 CENPBP07199 599 aaPredicted RBP38.04■■■■□ 3.68
CIC-201ENST00000160740 RANGAP1P46060 587 aaPredicted RBP37.99■■■■□ 3.67
CIC-201ENST00000160740 CCER1Q8TC90 406 aaPredicted RBP37.89■■■■□ 3.66
CIC-201ENST00000160740 ZEB1P37275 1124 aaPredicted RBP37.73■■■■□ 3.63
CIC-201ENST00000160740 ATP1B4Q9UN42 357 aaPredicted RBP37.67■■■■□ 3.62
CIC-201ENST00000160740 TRIM41Q8WV44 630 aa37.53■■■■□ 3.6
CIC-201ENST00000160740 YTHDC1Q96MU7 727 aaKnown RBP37.38■■■■□ 3.57
CIC-201ENST00000160740 NEFLP07196 543 aa37.35■■■■□ 3.57
CIC-201ENST00000160740 UBTFP17480 764 aaKnown RBP37.29■■■■□ 3.56
CIC-201ENST00000160740 PPARGC1BQ86YN6 1023 aaKnown RBP36.91■■■■□ 3.5
CIC-201ENST00000160740 MYT1Q01538 1121 aa36.85■■■■□ 3.49
CIC-201ENST00000160740 TRIM26Q12899 539 aaPredicted RBP36.47■■■■□ 3.43
CIC-201ENST00000160740 DAXXQ9UER7 740 aaPredicted RBP36.46■■■■□ 3.43
CIC-201ENST00000160740 POLR3GLQ9BT43 218 aa36.43■■■■□ 3.42
CIC-201ENST00000160740 ITGAEP38570 1179 aa36.38■■■■□ 3.41
CIC-201ENST00000160740 HRCP23327 699 aa36.25■■■■□ 3.39
CIC-201ENST00000160740 MYT1LQ9UL68 1186 aa36.24■■■■□ 3.39
CIC-201ENST00000160740 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.16■■■■□ 3.38
CIC-201ENST00000160740 HNRNPUL2Q1KMD3 747 aaKnown RBP36.16■■■■□ 3.38
CIC-201ENST00000160740 CNGB1Q14028 1251 aaPredicted RBP36.14■■■■□ 3.38
CIC-201ENST00000160740 LOC105371045A0A1W2PR82 267 aa35.92■■■■□ 3.34
CIC-201ENST00000160740 CHIC1Q5VXU3 224 aa35.74■■■■□ 3.31
CIC-201ENST00000160740 SLC4A1APQ9BWU0 796 aaKnown RBP35.73■■■■□ 3.31
CIC-201ENST00000160740 ZNF316A6NFI3 1004 aaPredicted RBP35.61■■■■□ 3.29
CIC-201ENST00000160740 RTL5Q5HYW3 569 aaPredicted RBP35.59■■■■□ 3.29
CIC-201ENST00000160740 CLSPNQ9HAW4 1339 aa35.58■■■■□ 3.29
CIC-201ENST00000160740 DIEXFQ68CQ4 756 aaKnown RBP35.51■■■■□ 3.27
CIC-201ENST00000160740 FAM50AQ14320 339 aaKnown RBP35.29■■■■□ 3.24
CIC-201ENST00000160740 TRIM52Q96A61 297 aa35.19■■■■□ 3.22
CIC-201ENST00000160740 BCANQ96GW7 911 aa35.17■■■■□ 3.22
CIC-201ENST00000160740 NEUROD1Q13562 356 aa35.15■■■■□ 3.22
CIC-201ENST00000160740 GTF3C3Q9Y5Q9 886 aa34.94■■■■□ 3.18
CIC-201ENST00000160740 ZNF326Q5BKZ1 582 aaKnown RBP34.9■■■■□ 3.18
CIC-201ENST00000160740 ANP32CO43423 234 aa34.88■■■■□ 3.17
CIC-201ENST00000160740 CDK11AQ9UQ88 783 aaPredicted RBP34.85■■■■□ 3.17
CIC-201ENST00000160740 ZBTB47Q9UFB7 747 aaPredicted RBP34.79■■■■□ 3.16
CIC-201ENST00000160740 BCL11AQ9H165 835 aa34.69■■■■□ 3.14
CIC-201ENST00000160740 CANXP27824 592 aaKnown RBP34.62■■■■□ 3.13
CIC-201ENST00000160740 SLC24A1O60721 1099 aa34.58■■■■□ 3.13
CIC-201ENST00000160740 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
CIC-201ENST00000160740 FBLN2P98095 1184 aa34.36■■■■□ 3.09
CIC-201ENST00000160740 NEFMP07197 916 aa34.32■■■■□ 3.08
CIC-201ENST00000160740 ANP32AP39687 249 aaKnown RBP34.31■■■■□ 3.08
CIC-201ENST00000160740 NPM2Q86SE8 214 aaKnown RBP34.27■■■■□ 3.08
CIC-201ENST00000160740 ACIN1Q9UKV3 1341 aaKnown RBP34.24■■■■□ 3.07
CIC-201ENST00000160740 ARID3CA6NKF2 412 aa34.22■■■■□ 3.07
CIC-201ENST00000160740 P3H3Q8IVL6 736 aa34.2■■■■□ 3.06
CIC-201ENST00000160740 ABCC9O60706 1549 aa34.08■■■■□ 3.05
CIC-201ENST00000160740 ZNF777Q9ULD5 760 aaPredicted RBP34.04■■■■□ 3.04
CIC-201ENST00000160740 FKBP8Q14318 412 aa33.97■■■■□ 3.03
CIC-201ENST00000160740 EIF5BO60841 1220 aaKnown RBP33.9■■■■□ 3.02
CIC-201ENST00000160740 ANP32BQ92688 251 aaKnown RBP33.88■■■■□ 3.01
CIC-201ENST00000160740 HSP90AA1P07900 732 aaKnown RBP33.87■■■■□ 3.01
CIC-201ENST00000160740 CSRNP3Q8WYN3 585 aa33.83■■■■□ 3.01
CIC-201ENST00000160740 HNRNPUQ00839 825 aaKnown RBP eCLIP33.78■■■■□ 3
CIC-201ENST00000160740 FAM9BQ8IZU0 186 aa33.75■■■□□ 2.99
CIC-201ENST00000160740 TONSLQ96HA7 1378 aa33.74■■■□□ 2.99
CIC-201ENST00000160740 UPF2Q9HAU5 1272 aaKnown RBP33.72■■■□□ 2.99
CIC-201ENST00000160740 SALL2Q9Y467 1007 aaPredicted RBP33.71■■■□□ 2.99
CIC-201ENST00000160740 CHGAP10645 457 aaKnown RBP33.7■■■□□ 2.99
CIC-201ENST00000160740 DDX10Q13206 875 aaKnown RBP33.66■■■□□ 2.98
CIC-201ENST00000160740 ESF1Q9H501 851 aaKnown RBP33.59■■■□□ 2.97
CIC-201ENST00000160740 STAG3Q9UJ98 1225 aa33.59■■■□□ 2.97
CIC-201ENST00000160740 NBR1Q14596 966 aa33.54■■■□□ 2.96
CIC-201ENST00000160740 CCDC136Q96JN2 1154 aa33.5■■■□□ 2.95
CIC-201ENST00000160740 PLPPR3Q6T4P5 718 aa33.49■■■□□ 2.95
CIC-201ENST00000160740 ARXQ96QS3 562 aa33.47■■■□□ 2.95
CIC-201ENST00000160740 TMC1Q8TDI8 760 aa33.45■■■□□ 2.94
CIC-201ENST00000160740 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.4■■■□□ 2.94
CIC-201ENST00000160740 CHIC2Q9UKJ5 165 aa33.37■■■□□ 2.93
CIC-201ENST00000160740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.34■■■□□ 2.935e-7■□□□□ 9.8
CIC-201ENST00000160740 WDR43Q15061 677 aaKnown RBP eCLIP33.33■■■□□ 2.93
CIC-201ENST00000160740 GLIPR1L2Q4G1C9 344 aa33.32■■■□□ 2.92
CIC-201ENST00000160740 MRS2Q9HD23 443 aa33.27■■■□□ 2.92
CIC-201ENST00000160740 IRX6P78412 446 aaPredicted RBP33.26■■■□□ 2.92
CIC-201ENST00000160740 KDM2AQ9Y2K7 1162 aa33.23■■■□□ 2.91
CIC-201ENST00000160740 NPM1P06748 294 aaKnown RBP eCLIP33.12■■■□□ 2.89
CIC-201ENST00000160740 HIRIP3Q9BW71 556 aaPredicted RBP33.11■■■□□ 2.89
CIC-201ENST00000160740 DCAF1Q9Y4B6 1507 aa33.1■■■□□ 2.89
CIC-201ENST00000160740 MIER1Q8N108 512 aa33.08■■■□□ 2.89
CIC-201ENST00000160740 MYH16Q9H6N6 1097 aa33.06■■■□□ 2.88
CIC-201ENST00000160740 SCAF1Q9H7N4 1312 aaKnown RBP33.01■■■□□ 2.87
CIC-201ENST00000160740 TSPY4P0CV99 314 aa32.98■■■□□ 2.87
CIC-201ENST00000160740 TSPY10P0CW01 314 aa32.98■■■□□ 2.87
CIC-201ENST00000160740 SCRIBQ14160 1630 aa32.92■■■□□ 2.86
CIC-201ENST00000160740 MTUS2Q5JR59 1369 aa32.9■■■□□ 2.86
CIC-201ENST00000160740 SENP3Q9H4L4 574 aaPredicted RBP32.9■■■□□ 2.86
CIC-201ENST00000160740 A0A0G2JS52 829 aa32.89■■■□□ 2.85
CIC-201ENST00000160740 EIF4G2P78344 907 aaKnown RBP eCLIP32.87■■■□□ 2.855e-6■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms