RNA–Protein interactions for RNA: ENST00000450829.5

TM9SF4-205, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 550 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-205ENST00000450829 NISCHQ9Y2I1 1504 aa13.21□□□□□ -0.29
TM9SF4-205ENST00000450829 AEBP2Q6ZN18 517 aaPredicted RBP12.1□□□□□ -0.47
TM9SF4-205ENST00000450829 CCDC180Q9P1Z9 1646 aa11.93□□□□□ -0.5
TM9SF4-205ENST00000450829 ABCC9O60706 1549 aa11.84□□□□□ -0.51
TM9SF4-205ENST00000450829 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
TM9SF4-205ENST00000450829 CHIC1Q5VXU3 224 aa11.25□□□□□ -0.61
TM9SF4-205ENST00000450829 NACADO15069 1562 aa11.21□□□□□ -0.61
TM9SF4-205ENST00000450829 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.62
TM9SF4-205ENST00000450829 ZCCHC6Q5VYS8 1495 aaKnown RBP11.11□□□□□ -0.63
TM9SF4-205ENST00000450829 DNAJC5BQ9UF47 199 aa11.07□□□□□ -0.64
TM9SF4-205ENST00000450829 MYO15BQ96JP2 1530 aa11.06□□□□□ -0.64
TM9SF4-205ENST00000450829 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
TM9SF4-205ENST00000450829 POTEDQ86YR6 584 aa11.01□□□□□ -0.65
TM9SF4-205ENST00000450829 DCAF8L2P0C7V8 631 aa10.95□□□□□ -0.66
TM9SF4-205ENST00000450829 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
TM9SF4-205ENST00000450829 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
TM9SF4-205ENST00000450829 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
TM9SF4-205ENST00000450829 SHROOM4Q9ULL8 1493 aa10.83□□□□□ -0.68
TM9SF4-205ENST00000450829 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
TM9SF4-205ENST00000450829 EIF4G1Q04637 1599 aaKnown RBP10.71□□□□□ -0.69
TM9SF4-205ENST00000450829 CECR2Q9BXF3 1484 aa10.65□□□□□ -0.7
TM9SF4-205ENST00000450829 SENP3Q9H4L4 574 aaPredicted RBP10.44□□□□□ -0.74
TM9SF4-205ENST00000450829 SMARCA4P51532 1647 aa10.35□□□□□ -0.75
TM9SF4-205ENST00000450829 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
TM9SF4-205ENST00000450829 ATAD2BQ9ULI0 1458 aa10.3□□□□□ -0.76
TM9SF4-205ENST00000450829 HMGXB3Q12766 1538 aa10.3□□□□□ -0.76
TM9SF4-205ENST00000450829 SMARCA2P51531 1590 aa10.29□□□□□ -0.76
TM9SF4-205ENST00000450829 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
TM9SF4-205ENST00000450829 BAZ1AQ9NRL2 1556 aaPredicted RBP10.25□□□□□ -0.77
TM9SF4-205ENST00000450829 CUX2O14529 1486 aa10.21□□□□□ -0.78
TM9SF4-205ENST00000450829 SUPT5HO00267 1087 aaKnown RBP10.2□□□□□ -0.78
TM9SF4-205ENST00000450829 NESP48681 1621 aa10.19□□□□□ -0.78
TM9SF4-205ENST00000450829 MROH2BQ7Z745 1585 aa10.19□□□□□ -0.78
TM9SF4-205ENST00000450829 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
TM9SF4-205ENST00000450829 ERCC6Q03468 1493 aa10.18□□□□□ -0.78
TM9SF4-205ENST00000450829 PHF23Q9BUL5 403 aaPredicted RBP10.18□□□□□ -0.78
TM9SF4-205ENST00000450829 RSF1Q96T23 1441 aaPredicted RBP10.17□□□□□ -0.78
TM9SF4-205ENST00000450829 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
TM9SF4-205ENST00000450829 WIZO95785 1651 aa10.15□□□□□ -0.79
TM9SF4-205ENST00000450829 KIF21AQ7Z4S6 1674 aa10.13□□□□□ -0.79
TM9SF4-205ENST00000450829 DNAJC5Q9H3Z4 198 aa10.12□□□□□ -0.79
TM9SF4-205ENST00000450829 LAMC3Q9Y6N6 1575 aa10.12□□□□□ -0.79
TM9SF4-205ENST00000450829 TOP2AP11388 1531 aaKnown RBP10.03□□□□□ -0.8
TM9SF4-205ENST00000450829 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
TM9SF4-205ENST00000450829 CADPSQ9ULU8 1353 aa9.98□□□□□ -0.81
TM9SF4-205ENST00000450829 WDR62O43379 1518 aa9.97□□□□□ -0.81
TM9SF4-205ENST00000450829 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
TM9SF4-205ENST00000450829 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
TM9SF4-205ENST00000450829 CEP164Q9UPV0 1460 aa9.91□□□□□ -0.82
TM9SF4-205ENST00000450829 CFTRP13569 1480 aa9.9□□□□□ -0.83
TM9SF4-205ENST00000450829 FANCD2Q9BXW9 1451 aa9.9□□□□□ -0.83
TM9SF4-205ENST00000450829 FOXD1Q16676 465 aa9.87□□□□□ -0.83
TM9SF4-205ENST00000450829 URB2Q14146 1524 aaKnown RBP9.86□□□□□ -0.83
TM9SF4-205ENST00000450829 CCDC88BA6NC98 1476 aa9.84□□□□□ -0.83
TM9SF4-205ENST00000450829 TOPBP1Q92547 1522 aa9.73□□□□□ -0.85
TM9SF4-205ENST00000450829 ZNF608Q9ULD9 1512 aaPredicted RBP9.72□□□□□ -0.85
TM9SF4-205ENST00000450829 DNMBPQ6XZF7 1577 aa9.72□□□□□ -0.85
TM9SF4-205ENST00000450829 EIF4G3O43432 1585 aaKnown RBP9.71□□□□□ -0.85
TM9SF4-205ENST00000450829 ABCC8Q09428 1581 aa9.71□□□□□ -0.85
TM9SF4-205ENST00000450829 IFT140Q96RY7 1462 aa9.71□□□□□ -0.86
TM9SF4-205ENST00000450829 TARBP1Q13395 1621 aaKnown RBP9.7□□□□□ -0.86
TM9SF4-205ENST00000450829 CHD1O14646 1710 aa9.67□□□□□ -0.86
TM9SF4-205ENST00000450829 RIMBP3CA6NJZ7 1639 aa9.66□□□□□ -0.86
TM9SF4-205ENST00000450829 RIMBP3BA6NNM3 1639 aa9.66□□□□□ -0.86
TM9SF4-205ENST00000450829 RIMBP3Q9UFD9 1639 aa9.66□□□□□ -0.86
TM9SF4-205ENST00000450829 BIVM-ERCC5R4GMW8 1640 aa9.65□□□□□ -0.86
TM9SF4-205ENST00000450829 TRIM41Q8WV44 630 aa9.65□□□□□ -0.86
TM9SF4-205ENST00000450829 POLA1P09884 1462 aaPredicted RBP9.64□□□□□ -0.87
TM9SF4-205ENST00000450829 SYNJ1O43426 1573 aa9.63□□□□□ -0.87
TM9SF4-205ENST00000450829 OSCARQ8IYS5 282 aa9.62□□□□□ -0.87
TM9SF4-205ENST00000450829 ARHGEF11O15085 1522 aa9.61□□□□□ -0.87
TM9SF4-205ENST00000450829 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
TM9SF4-205ENST00000450829 TOP2BQ02880 1626 aa9.6□□□□□ -0.87
TM9SF4-205ENST00000450829 CUX1P39880 1505 aa9.59□□□□□ -0.87
TM9SF4-205ENST00000450829 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.871e-7■■■■□ 22
TM9SF4-205ENST00000450829 WRNQ14191 1432 aaPredicted RBP eCLIP9.58□□□□□ -0.88
TM9SF4-205ENST00000450829 MSH5O43196 834 aa9.58□□□□□ -0.88
TM9SF4-205ENST00000450829 RAD54L2Q9Y4B4 1467 aa9.58□□□□□ -0.88
TM9SF4-205ENST00000450829 FGD5Q6ZNL6 1462 aa9.57□□□□□ -0.88
TM9SF4-205ENST00000450829 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
TM9SF4-205ENST00000450829 CLASP1Q7Z460 1538 aa9.53□□□□□ -0.88
TM9SF4-205ENST00000450829 SNAPC4Q5SXM2 1469 aa9.53□□□□□ -0.88
TM9SF4-205ENST00000450829 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
TM9SF4-205ENST00000450829 SOGA1O94964 1423 aa9.52□□□□□ -0.89
TM9SF4-205ENST00000450829 ABCA5Q8WWZ7 1642 aa9.51□□□□□ -0.89
TM9SF4-205ENST00000450829 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
TM9SF4-205ENST00000450829 MAGI1Q96QZ7 1491 aaPredicted RBP9.5□□□□□ -0.89
TM9SF4-205ENST00000450829 EEA1Q15075 1411 aa9.49□□□□□ -0.89
TM9SF4-205ENST00000450829 GRIN2BQ13224 1484 aa9.48□□□□□ -0.89
TM9SF4-205ENST00000450829 KIF21BO75037 1637 aa9.47□□□□□ -0.89
TM9SF4-205ENST00000450829 ABCA10Q8WWZ4 1543 aa9.46□□□□□ -0.89
TM9SF4-205ENST00000450829 SYNJ2O15056 1496 aa9.46□□□□□ -0.9
TM9SF4-205ENST00000450829 GAPVD1Q14C86 1478 aa9.44□□□□□ -0.9
TM9SF4-205ENST00000450829 ADAMTS12P58397 1594 aa9.44□□□□□ -0.9
TM9SF4-205ENST00000450829 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
TM9SF4-205ENST00000450829 FBLN2P98095 1184 aa9.43□□□□□ -0.9
TM9SF4-205ENST00000450829 LOC105371045A0A1W2PR82 267 aa9.41□□□□□ -0.9
TM9SF4-205ENST00000450829 CYB5RLQ6IPT4 315 aa9.4□□□□□ -0.9
TM9SF4-205ENST00000450829 FAM9AQ8IZU1 332 aaPredicted RBP9.4□□□□□ -0.9
TM9SF4-205ENST00000450829 CEP170Q5SW79 1584 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms