Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 EIF3B-207ENST00000465670 2766 ntTSL 214.47□□□□□ -0.092e-7■■■□□ 16.7
LARP4Q71RC2 EIF3B-211ENST00000475415 3745 ntTSL 210.37□□□□□ -0.752e-7■■■□□ 16.7
LARP4Q71RC2 HSBP1-203ENST00000569301 551 ntTSL 25.75□□□□□ -1.499e-11■■■□□ 16.7
LARP4Q71RC2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.094e-6■■■□□ 16.7
LARP4Q71RC2 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.174e-6■■■□□ 16.7
LARP4Q71RC2 HBP1-209ENST00000478930 563 ntTSL 45.95□□□□□ -1.464e-6■■■□□ 16.7
LARP4Q71RC2 HBP1-205ENST00000464009 478 ntTSL 55.3□□□□□ -1.564e-6■■■□□ 16.7
LARP4Q71RC2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.94■■□□□ 1.422e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-223ENST00000492275 769 ntTSL 323.85■■□□□ 1.412e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-210ENST00000450533 2451 ntTSL 1 (best)22.19■■□□□ 1.142e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-212ENST00000463216 842 ntTSL 521.87■■□□□ 1.092e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-224ENST00000494243 861 ntTSL 521.65■■□□□ 1.062e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-217ENST00000481605 1540 ntTSL 521.36■■□□□ 1.012e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-209ENST00000438055 3606 ntTSL 516.69■□□□□ 0.262e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-207ENST00000418766 3771 ntTSL 516.16■□□□□ 0.182e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-219ENST00000485402 3626 ntTSL 514.73□□□□□ -0.052e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.862e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-216ENST00000479930 8998 ntTSL 1 (best)8.51□□□□□ -1.052e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.422e-7■■■□□ 16.7
LARP4Q71RC2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.662e-7■■■□□ 16.7
LARP4Q71RC2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.184e-8■■■□□ 16.7
LARP4Q71RC2 GGCX-206ENST00000465637 563 ntTSL 412.65□□□□□ -0.384e-8■■■□□ 16.7
LARP4Q71RC2 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC9.66□□□□□ -0.864e-8■■■□□ 16.7
LARP4Q71RC2 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.24e-8■■■□□ 16.7
LARP4Q71RC2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.56□□□□□ -1.364e-8■■■□□ 16.7
LARP4Q71RC2 SORT1-206ENST00000485149 442 ntTSL 35.53□□□□□ -1.524e-8■■■□□ 16.7
LARP4Q71RC2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20■□□□□ 0.791e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.78■□□□□ 0.761e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-218ENST00000543939 1728 ntTSL 319.43■□□□□ 0.71e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.61e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.571e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.491e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-202ENST00000455113 1718 ntTSL 316.56■□□□□ 0.241e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.341e-6■■■□□ 16.7
LARP4Q71RC2 COPS7A-203ENST00000534877 1707 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.591e-6■■■□□ 16.7
LARP4Q71RC2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.235e-13■■■□□ 16.7
LARP4Q71RC2 POLR3K-202ENST00000481810 907 ntTSL 212.41□□□□□ -0.425e-13■■■□□ 16.7
LARP4Q71RC2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.466e-7■■■□□ 16.7
LARP4Q71RC2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.29■□□□□ 0.26e-7■■■□□ 16.7
LARP4Q71RC2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.136e-7■■■□□ 16.7
LARP4Q71RC2 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.021e-9■■■□□ 16.6
LARP4Q71RC2 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.351e-9■■■□□ 16.6
LARP4Q71RC2 XRCC5-206ENST00000460284 2962 ntTSL 1 (best)5.49□□□□□ -1.531e-9■■■□□ 16.6
LARP4Q71RC2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.77■□□□□ 0.446e-11■■■□□ 16.6
LARP4Q71RC2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.076e-9■■■□□ 16.6
LARP4Q71RC2 GORASP2-202ENST00000442798 1976 ntTSL 214.26□□□□□ -0.136e-9■■■□□ 16.6
LARP4Q71RC2 GORASP2-207ENST00000486498 2096 ntTSL 212.69□□□□□ -0.386e-9■■■□□ 16.6
LARP4Q71RC2 SEC22A-208ENST00000487572 870 ntTSL 318.2■□□□□ 0.58e-7■■■□□ 16.6
LARP4Q71RC2 SEC22A-205ENST00000477063 759 ntTSL 512.96□□□□□ -0.338e-7■■■□□ 16.6
LARP4Q71RC2 SEC22A-203ENST00000466950 565 ntTSL 512.61□□□□□ -0.398e-7■■■□□ 16.6
LARP4Q71RC2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC8□□□□□ -1.138e-7■■■□□ 16.6
LARP4Q71RC2 SEC22A-204ENST00000473494 1011 ntTSL 37.98□□□□□ -1.138e-7■■■□□ 16.6
LARP4Q71RC2 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.138e-7■■■□□ 16.6
LARP4Q71RC2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.498e-7■■■□□ 16.6
LARP4Q71RC2 SERPINC1-201ENST00000367698 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -14e-10■■■□□ 16.6
LARP4Q71RC2 SERPINC1-204ENST00000617423 984 ntTSL 1 (best) BASIC7.62□□□□□ -1.194e-10■■■□□ 16.6
LARP4Q71RC2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.871e-8■■■□□ 16.6
LARP4Q71RC2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.841e-8■■■□□ 16.6
LARP4Q71RC2 TMEM258-205ENST00000540434 553 ntTSL 210.49□□□□□ -0.733e-11■■■□□ 16.6
LARP4Q71RC2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.38e-9■■■□□ 16.6
LARP4Q71RC2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.158e-9■■■□□ 16.6
LARP4Q71RC2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.33e-6■■■□□ 16.6
LARP4Q71RC2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.131e-10■■■□□ 16.6
LARP4Q71RC2 HGH1-205ENST00000533266 2106 ntTSL 221.59■■□□□ 1.053e-6■■■□□ 16.6
LARP4Q71RC2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.861e-11■■■□□ 16.6
LARP4Q71RC2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.853e-6■■■□□ 16.6
LARP4Q71RC2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.823e-6■■■□□ 16.6
LARP4Q71RC2 HDGFL2-203ENST00000592417 1349 ntTSL 218.32■□□□□ 0.523e-6■■■□□ 16.6
LARP4Q71RC2 HDGFL2-207ENST00000615225 3100 ntTSL 518.16■□□□□ 0.53e-6■■■□□ 16.6
LARP4Q71RC2 NSUN2-203ENST00000504374 3217 ntTSL 216.91■□□□□ 0.31e-11■■■□□ 16.6
LARP4Q71RC2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.21e-11■■■□□ 16.6
LARP4Q71RC2 HGH1-206ENST00000534255 1791 ntTSL 1 (best)16.13■□□□□ 0.173e-6■■■□□ 16.6
LARP4Q71RC2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.46■□□□□ 0.073e-25■■■□□ 16.6
LARP4Q71RC2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.235e-6■■■□□ 16.6
LARP4Q71RC2 NSUN2-208ENST00000513888 1290 ntTSL 213.61□□□□□ -0.231e-11■■■□□ 16.6
LARP4Q71RC2 ZC3H18-208ENST00000566496 1949 ntTSL 212.39□□□□□ -0.435e-6■■■□□ 16.6
LARP4Q71RC2 HNRNPU-212ENST00000638230 1922 ntTSL 512.35□□□□□ -0.433e-25■■■□□ 16.6
LARP4Q71RC2 ZC3H18-206ENST00000565583 1068 ntTSL 211.77□□□□□ -0.535e-6■■■□□ 16.6
LARP4Q71RC2 HNRNPU-221ENST00000639824 1450 ntTSL 511.25□□□□□ -0.613e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-225ENST00000640119 461 ntTSL 510.69□□□□□ -0.73e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-224ENST00000640056 2045 ntTSL 510.02□□□□□ -0.81e-11■■■□□ 16.6
LARP4Q71RC2 HNRNPU-202ENST00000366525 2851 ntTSL 59.8□□□□□ -0.843e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-216ENST00000638716 2640 ntTSL 5 BASIC9.59□□□□□ -0.873e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-218ENST00000639064 2625 ntTSL 58.91□□□□□ -0.983e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC8.4□□□□□ -1.063e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-222ENST00000639880 4239 ntTSL 58.2□□□□□ -1.13e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC7.62□□□□□ -1.193e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-207ENST00000468690 5273 ntTSL 57.47□□□□□ -1.213e-25■■■□□ 16.6
LARP4Q71RC2 NSUN2-205ENST00000505892 3558 ntTSL 1 (best)7.13□□□□□ -1.271e-11■■■□□ 16.6
LARP4Q71RC2 HNRNPU-213ENST00000638301 3650 ntTSL 56.71□□□□□ -1.343e-25■■■□□ 16.6
LARP4Q71RC2 HNRNPU-208ENST00000475997 5290 ntTSL 55.85□□□□□ -1.471e-11■■■□□ 16.6
LARP4Q71RC2 GPX3-207ENST00000521650 467 ntTSL 212□□□□□ -0.492e-9■■■□□ 16.6
LARP4Q71RC2 CKB-211ENST00000555039 270 ntTSL 513.9□□□□□ -0.182e-7■■■□□ 16.6
LARP4Q71RC2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.93■□□□□ 0.625e-7■■■□□ 16.6
LARP4Q71RC2 AAMP-203ENST00000422731 742 ntTSL 312.13□□□□□ -0.476e-9■■■□□ 16.6
LARP4Q71RC2 MYL6-217ENST00000550639 419 ntTSL 58.83□□□□□ -19e-9■■■□□ 16.6
LARP4Q71RC2 CLSTN3-202ENST00000331148 2288 ntTSL 1 (best)18.11■□□□□ 0.492e-7■■■□□ 16.6
LARP4Q71RC2 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.622e-7■■■□□ 16.6
LARP4Q71RC2 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.722e-7■■■□□ 16.6
LARP4Q71RC2 CTSA-210ENST00000606000 644 ntTSL 311.21□□□□□ -0.618e-11■■■□□ 16.6
Retrieved 100 of 15,922 protein–RNA pairs in 1176.3 ms