RNA–Protein interactions for RNA: ENST00000534947.5

COPS7A-204, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-204ENST00000534947 NISCHQ9Y2I1 1504 aa39.85■■■■□ 3.97
COPS7A-204ENST00000534947 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.08
COPS7A-204ENST00000534947 ZCCHC6Q5VYS8 1495 aaKnown RBP33.71■■■□□ 2.99
COPS7A-204ENST00000534947 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
COPS7A-204ENST00000534947 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
COPS7A-204ENST00000534947 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.8
COPS7A-204ENST00000534947 DCAF8L2P0C7V8 631 aa32.47■■■□□ 2.79
COPS7A-204ENST00000534947 MYO15BQ96JP2 1530 aa32.18■■■□□ 2.74
COPS7A-204ENST00000534947 ABCC9O60706 1549 aa31.78■■■□□ 2.68
COPS7A-204ENST00000534947 CHIC1Q5VXU3 224 aa31.75■■■□□ 2.67
COPS7A-204ENST00000534947 NACADO15069 1562 aa31.63■■■□□ 2.65
COPS7A-204ENST00000534947 SCRIBQ14160 1630 aa31.62■■■□□ 2.65
COPS7A-204ENST00000534947 RSF1Q96T23 1441 aaPredicted RBP31.33■■■□□ 2.61
COPS7A-204ENST00000534947 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
COPS7A-204ENST00000534947 CECR2Q9BXF3 1484 aa30.85■■■□□ 2.53
COPS7A-204ENST00000534947 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
COPS7A-204ENST00000534947 BAZ1AQ9NRL2 1556 aaPredicted RBP30.69■■■□□ 2.5
COPS7A-204ENST00000534947 WIZO95785 1651 aa30.64■■■□□ 2.49
COPS7A-204ENST00000534947 UNC13AQ9UPW8 1703 aa30.55■■■□□ 2.48
COPS7A-204ENST00000534947 LOC105371045A0A1W2PR82 267 aa30.53■■■□□ 2.48
COPS7A-204ENST00000534947 TRIM41Q8WV44 630 aa30.51■■■□□ 2.47
COPS7A-204ENST00000534947 SMARCA4P51532 1647 aa30.41■■■□□ 2.46
COPS7A-204ENST00000534947 HRCP23327 699 aa30.4■■■□□ 2.46
COPS7A-204ENST00000534947 TOP2AP11388 1531 aaKnown RBP30.35■■■□□ 2.45
COPS7A-204ENST00000534947 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
COPS7A-204ENST00000534947 PCGF6Q9BYE7 350 aa30.32■■■□□ 2.44
COPS7A-204ENST00000534947 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
COPS7A-204ENST00000534947 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
COPS7A-204ENST00000534947 TRIM26Q12899 539 aaPredicted RBP30.09■■■□□ 2.41
COPS7A-204ENST00000534947 CCDC88BA6NC98 1476 aa30.05■■■□□ 2.4
COPS7A-204ENST00000534947 PEG3Q9GZU2 1588 aa30.02■■■□□ 2.4
COPS7A-204ENST00000534947 FAM9AQ8IZU1 332 aaPredicted RBP29.95■■■□□ 2.38
COPS7A-204ENST00000534947 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
COPS7A-204ENST00000534947 PABPN1Q86U42 306 aaKnown RBP eCLIP29.76■■■□□ 2.36
COPS7A-204ENST00000534947 EEA1Q15075 1411 aa29.66■■■□□ 2.34
COPS7A-204ENST00000534947 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
COPS7A-204ENST00000534947 BAZ1BQ9UIG0 1483 aaKnown RBP29.52■■■□□ 2.32
COPS7A-204ENST00000534947 ZEB1P37275 1124 aaPredicted RBP29.5■■■□□ 2.31
COPS7A-204ENST00000534947 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
COPS7A-204ENST00000534947 EHMT2Q96KQ7 1210 aa29.44■■■□□ 2.3
COPS7A-204ENST00000534947 SOGA1O94964 1423 aa29.43■■■□□ 2.3
COPS7A-204ENST00000534947 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
COPS7A-204ENST00000534947 TNIKQ9UKE5 1360 aa29.4■■■□□ 2.3
COPS7A-204ENST00000534947 CSRNP3Q8WYN3 585 aa29.33■■■□□ 2.29
COPS7A-204ENST00000534947 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
COPS7A-204ENST00000534947 SYNJ1O43426 1573 aa29.3■■■□□ 2.28
COPS7A-204ENST00000534947 GOLGA3Q08378 1498 aa29.28■■■□□ 2.28
COPS7A-204ENST00000534947 HMGXB3Q12766 1538 aa29.26■■■□□ 2.28
COPS7A-204ENST00000534947 RUSC2Q8N2Y8 1516 aa29.24■■■□□ 2.27
COPS7A-204ENST00000534947 KIF21BO75037 1637 aa29.21■■■□□ 2.27
COPS7A-204ENST00000534947 NCAPD3P42695 1498 aa29.19■■■□□ 2.26
COPS7A-204ENST00000534947 CEP164Q9UPV0 1460 aa29.16■■■□□ 2.26
COPS7A-204ENST00000534947 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
COPS7A-204ENST00000534947 BIVM-ERCC5R4GMW8 1640 aa29.07■■■□□ 2.24
COPS7A-204ENST00000534947 UBTFP17480 764 aaKnown RBP29.04■■■□□ 2.24
COPS7A-204ENST00000534947 CFTRP13569 1480 aa28.85■■■□□ 2.21
COPS7A-204ENST00000534947 CLIP1P30622 1438 aa28.83■■■□□ 2.21
COPS7A-204ENST00000534947 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
COPS7A-204ENST00000534947 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
COPS7A-204ENST00000534947 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
COPS7A-204ENST00000534947 VPS8Q8N3P4 1428 aa28.75■■■□□ 2.19
COPS7A-204ENST00000534947 CUX1P39880 1505 aa28.75■■■□□ 2.19
COPS7A-204ENST00000534947 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
COPS7A-204ENST00000534947 CCER1Q8TC90 406 aaPredicted RBP28.69■■■□□ 2.18
COPS7A-204ENST00000534947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.65■■■□□ 2.18
COPS7A-204ENST00000534947 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
COPS7A-204ENST00000534947 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.15
COPS7A-204ENST00000534947 TTBK1Q5TCY1 1321 aaPredicted RBP28.51■■■□□ 2.15
COPS7A-204ENST00000534947 APLP2Q06481 763 aa28.47■■■□□ 2.15
COPS7A-204ENST00000534947 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
COPS7A-204ENST00000534947 ARAP1Q96P48 1450 aa28.41■■■□□ 2.14
COPS7A-204ENST00000534947 CUX2O14529 1486 aa28.28■■■□□ 2.12
COPS7A-204ENST00000534947 FGD5Q6ZNL6 1462 aa28.26■■■□□ 2.11
COPS7A-204ENST00000534947 IGF1RP08069 1367 aa28.24■■■□□ 2.11
COPS7A-204ENST00000534947 ARHGAP35Q9NRY4 1499 aa28.21■■■□□ 2.11
COPS7A-204ENST00000534947 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.1
COPS7A-204ENST00000534947 RANGAP1P46060 587 aaPredicted RBP28.17■■■□□ 2.1
COPS7A-204ENST00000534947 DNMBPQ6XZF7 1577 aa28.17■■■□□ 2.1
COPS7A-204ENST00000534947 HNRNPUL2Q1KMD3 747 aaKnown RBP28.14■■■□□ 2.1
COPS7A-204ENST00000534947 CARMIL1Q5VZK9 1371 aa28.12■■■□□ 2.09
COPS7A-204ENST00000534947 MAP3K1Q13233 1512 aa28.1■■■□□ 2.09
COPS7A-204ENST00000534947 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
COPS7A-204ENST00000534947 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
COPS7A-204ENST00000534947 CLSPNQ9HAW4 1339 aa28.05■■■□□ 2.08
COPS7A-204ENST00000534947 DIEXFQ68CQ4 756 aaKnown RBP28.03■■■□□ 2.08
COPS7A-204ENST00000534947 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
COPS7A-204ENST00000534947 TOPBP1Q92547 1522 aa28.02■■■□□ 2.08
COPS7A-204ENST00000534947 KANK4Q5T7N3 995 aaPredicted RBP28.01■■■□□ 2.07
COPS7A-204ENST00000534947 CUL7Q14999 1698 aa27.97■■■□□ 2.07
COPS7A-204ENST00000534947 POLA1P09884 1462 aaPredicted RBP27.97■■■□□ 2.07
COPS7A-204ENST00000534947 ZNF316A6NFI3 1004 aaPredicted RBP27.97■■■□□ 2.07
COPS7A-204ENST00000534947 TIAM1Q13009 1591 aa27.95■■■□□ 2.06
COPS7A-204ENST00000534947 FHAD1B1AJZ9 1412 aa27.91■■■□□ 2.06
COPS7A-204ENST00000534947 CCNB3Q8WWL7 1395 aa27.88■■■□□ 2.05
COPS7A-204ENST00000534947 WDR97A6NE52 1622 aa27.88■■■□□ 2.05
COPS7A-204ENST00000534947 NESP48681 1621 aa27.88■■■□□ 2.05
COPS7A-204ENST00000534947 EFCAB5A4FU69 1503 aa27.87■■■□□ 2.05
COPS7A-204ENST00000534947 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
COPS7A-204ENST00000534947 CFAP43Q8NDM7 1665 aa27.85■■■□□ 2.05
COPS7A-204ENST00000534947 DHX57Q6P158 1386 aaKnown RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms