RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
COPS7A-202ENST00000455113 CCDC180Q9P1Z9 1646 aa38.35■■■■□ 3.73
COPS7A-202ENST00000455113 ABCC9O60706 1549 aa37.69■■■■□ 3.62
COPS7A-202ENST00000455113 RB1CC1Q8TDY2 1594 aa36.22■■■■□ 3.39
COPS7A-202ENST00000455113 DCAF8L2P0C7V8 631 aa36.19■■■■□ 3.38
COPS7A-202ENST00000455113 NACADO15069 1562 aa36.12■■■■□ 3.37
COPS7A-202ENST00000455113 MYO15BQ96JP2 1530 aa35.82■■■■□ 3.32
COPS7A-202ENST00000455113 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
COPS7A-202ENST00000455113 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
COPS7A-202ENST00000455113 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
COPS7A-202ENST00000455113 PABPN1Q86U42 306 aaKnown RBP eCLIP35.2■■■■□ 3.23
COPS7A-202ENST00000455113 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
COPS7A-202ENST00000455113 SCRIBQ14160 1630 aa34.99■■■■□ 3.19
COPS7A-202ENST00000455113 SHROOM4Q9ULL8 1493 aa34.72■■■■□ 3.15
COPS7A-202ENST00000455113 DNAJC5BQ9UF47 199 aa34.65■■■■□ 3.14
COPS7A-202ENST00000455113 EIF4G1Q04637 1599 aaKnown RBP34.17■■■■□ 3.06
COPS7A-202ENST00000455113 CC2D2AQ9P2K1 1620 aa34.07■■■■□ 3.04
COPS7A-202ENST00000455113 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
COPS7A-202ENST00000455113 SMARCA4P51532 1647 aa33.43■■■□□ 2.94
COPS7A-202ENST00000455113 BAZ1AQ9NRL2 1556 aaPredicted RBP33.42■■■□□ 2.94
COPS7A-202ENST00000455113 NCAPD3P42695 1498 aa33.29■■■□□ 2.92
COPS7A-202ENST00000455113 SMARCA2P51531 1590 aa33.29■■■□□ 2.92
COPS7A-202ENST00000455113 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
COPS7A-202ENST00000455113 MROH2BQ7Z745 1585 aa33.14■■■□□ 2.9
COPS7A-202ENST00000455113 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
COPS7A-202ENST00000455113 PEG3Q9GZU2 1588 aa33.09■■■□□ 2.89
COPS7A-202ENST00000455113 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
COPS7A-202ENST00000455113 WIZO95785 1651 aa32.8■■■□□ 2.84
COPS7A-202ENST00000455113 RSF1Q96T23 1441 aaPredicted RBP32.72■■■□□ 2.83
COPS7A-202ENST00000455113 ERCC6Q03468 1493 aa32.58■■■□□ 2.81
COPS7A-202ENST00000455113 NESP48681 1621 aa32.52■■■□□ 2.8
COPS7A-202ENST00000455113 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
COPS7A-202ENST00000455113 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
COPS7A-202ENST00000455113 CADPSQ9ULU8 1353 aa32.35■■■□□ 2.77
COPS7A-202ENST00000455113 PDS5BQ9NTI5 1447 aa32.31■■■□□ 2.76
COPS7A-202ENST00000455113 CUX2O14529 1486 aa32.23■■■□□ 2.75
COPS7A-202ENST00000455113 KIF21AQ7Z4S6 1674 aa32.17■■■□□ 2.74
COPS7A-202ENST00000455113 CFTRP13569 1480 aa32.1■■■□□ 2.73
COPS7A-202ENST00000455113 CCDC88BA6NC98 1476 aa32.06■■■□□ 2.72
COPS7A-202ENST00000455113 THOC2Q8NI27 1593 aaKnown RBP32.06■■■□□ 2.72
COPS7A-202ENST00000455113 FANCD2Q9BXW9 1451 aa31.98■■■□□ 2.71
COPS7A-202ENST00000455113 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
COPS7A-202ENST00000455113 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
COPS7A-202ENST00000455113 SUPT5HO00267 1087 aaKnown RBP31.89■■■□□ 2.69
COPS7A-202ENST00000455113 PRDM2Q13029 1718 aa31.87■■■□□ 2.69
COPS7A-202ENST00000455113 WDR62O43379 1518 aa31.81■■■□□ 2.68
COPS7A-202ENST00000455113 URB2Q14146 1524 aaKnown RBP31.61■■■□□ 2.65
COPS7A-202ENST00000455113 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
COPS7A-202ENST00000455113 TOPBP1Q92547 1522 aa31.43■■■□□ 2.62
COPS7A-202ENST00000455113 DNAJC5Q9H3Z4 198 aa31.42■■■□□ 2.62
COPS7A-202ENST00000455113 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
COPS7A-202ENST00000455113 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
COPS7A-202ENST00000455113 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
COPS7A-202ENST00000455113 ZNF608Q9ULD9 1512 aaPredicted RBP31.11■■■□□ 2.57
COPS7A-202ENST00000455113 CUX1P39880 1505 aa31.1■■■□□ 2.57
COPS7A-202ENST00000455113 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
COPS7A-202ENST00000455113 SOGA1O94964 1423 aa31.06■■■□□ 2.56
COPS7A-202ENST00000455113 TARBP1Q13395 1621 aaKnown RBP31.06■■■□□ 2.56
COPS7A-202ENST00000455113 EIF4G3O43432 1585 aaKnown RBP31.02■■■□□ 2.56
COPS7A-202ENST00000455113 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.56
COPS7A-202ENST00000455113 AQRO60306 1485 aaKnown RBP eCLIP30.96■■■□□ 2.55
COPS7A-202ENST00000455113 OSCARQ8IYS5 282 aa30.93■■■□□ 2.54
COPS7A-202ENST00000455113 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
COPS7A-202ENST00000455113 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
COPS7A-202ENST00000455113 WDR97A6NE52 1622 aa30.88■■■□□ 2.53
COPS7A-202ENST00000455113 TOP2BQ02880 1626 aa30.83■■■□□ 2.53
COPS7A-202ENST00000455113 BIVM-ERCC5R4GMW8 1640 aa30.82■■■□□ 2.52
COPS7A-202ENST00000455113 SYNJ1O43426 1573 aa30.78■■■□□ 2.52
COPS7A-202ENST00000455113 ABCA10Q8WWZ4 1543 aa30.75■■■□□ 2.51
COPS7A-202ENST00000455113 FBLN2P98095 1184 aa30.73■■■□□ 2.51
COPS7A-202ENST00000455113 GRIN2BQ13224 1484 aa30.71■■■□□ 2.51
COPS7A-202ENST00000455113 GAPVD1Q14C86 1478 aa30.69■■■□□ 2.5
COPS7A-202ENST00000455113 SNAPC4Q5SXM2 1469 aa30.67■■■□□ 2.5
COPS7A-202ENST00000455113 CHD1O14646 1710 aa30.66■■■□□ 2.5
COPS7A-202ENST00000455113 MAGI1Q96QZ7 1491 aaPredicted RBP30.65■■■□□ 2.5
COPS7A-202ENST00000455113 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
COPS7A-202ENST00000455113 CHMP7Q8WUX9 453 aaPredicted RBP30.61■■■□□ 2.49
COPS7A-202ENST00000455113 ABCA5Q8WWZ7 1642 aa30.61■■■□□ 2.49
COPS7A-202ENST00000455113 SYNJ2O15056 1496 aa30.53■■■□□ 2.48
COPS7A-202ENST00000455113 ERICH3Q5RHP9 1530 aa30.4■■■□□ 2.46
COPS7A-202ENST00000455113 TRIM41Q8WV44 630 aa30.4■■■□□ 2.46
COPS7A-202ENST00000455113 RIMBP3CA6NJZ7 1639 aa30.37■■■□□ 2.45
COPS7A-202ENST00000455113 RIMBP3BA6NNM3 1639 aa30.37■■■□□ 2.45
COPS7A-202ENST00000455113 RIMBP3Q9UFD9 1639 aa30.37■■■□□ 2.45
COPS7A-202ENST00000455113 ARHGEF11O15085 1522 aa30.35■■■□□ 2.45
COPS7A-202ENST00000455113 ADAMTS12P58397 1594 aa30.34■■■□□ 2.45
COPS7A-202ENST00000455113 FHAD1B1AJZ9 1412 aa30.34■■■□□ 2.45
COPS7A-202ENST00000455113 KIF27Q86VH2 1401 aa30.31■■■□□ 2.44
COPS7A-202ENST00000455113 GRIN2AQ12879 1464 aa30.3■■■□□ 2.44
COPS7A-202ENST00000455113 CLASP1Q7Z460 1538 aa30.28■■■□□ 2.44
COPS7A-202ENST00000455113 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
COPS7A-202ENST00000455113 NUP160Q12769 1436 aa30.14■■■□□ 2.42
COPS7A-202ENST00000455113 IGF1RP08069 1367 aa30.14■■■□□ 2.41
COPS7A-202ENST00000455113 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
COPS7A-202ENST00000455113 CUL7Q14999 1698 aa30.11■■■□□ 2.41
COPS7A-202ENST00000455113 ARAP1Q96P48 1450 aa30.06■■■□□ 2.4
COPS7A-202ENST00000455113 CARMIL1Q5VZK9 1371 aa30.01■■■□□ 2.39
COPS7A-202ENST00000455113 SHROOM2Q13796 1616 aa29.92■■■□□ 2.38
COPS7A-202ENST00000455113 JPH4Q96JJ6 628 aa29.91■■■□□ 2.38
COPS7A-202ENST00000455113 RUSC2Q8N2Y8 1516 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms