RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 NISCHQ9Y2I1 1504 aa15.9■□□□□ 0.14
HNRNPU-219ENST00000639628 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
HNRNPU-219ENST00000639628 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
HNRNPU-219ENST00000639628 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
HNRNPU-219ENST00000639628 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
HNRNPU-219ENST00000639628 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
HNRNPU-219ENST00000639628 FAM9AQ8IZU1 332 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-219ENST00000639628 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
HNRNPU-219ENST00000639628 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
HNRNPU-219ENST00000639628 ZEB1P37275 1124 aaPredicted RBP13.39□□□□□ -0.27
HNRNPU-219ENST00000639628 HRCP23327 699 aa13.34□□□□□ -0.27
HNRNPU-219ENST00000639628 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
HNRNPU-219ENST00000639628 APLP2Q06481 763 aa13.28□□□□□ -0.28
HNRNPU-219ENST00000639628 TRIM26Q12899 539 aaPredicted RBP13.28□□□□□ -0.28
HNRNPU-219ENST00000639628 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
HNRNPU-219ENST00000639628 LOC105371045A0A1W2PR82 267 aa13.23□□□□□ -0.29
HNRNPU-219ENST00000639628 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-219ENST00000639628 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-219ENST00000639628 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
HNRNPU-219ENST00000639628 CENPBP07199 599 aaPredicted RBP13.02□□□□□ -0.33
HNRNPU-219ENST00000639628 PPARGC1BQ86YN6 1023 aaKnown RBP12.99□□□□□ -0.33
HNRNPU-219ENST00000639628 ABCC9O60706 1549 aa12.99□□□□□ -0.33
HNRNPU-219ENST00000639628 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
HNRNPU-219ENST00000639628 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-219ENST00000639628 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
HNRNPU-219ENST00000639628 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
HNRNPU-219ENST00000639628 MYO15BQ96JP2 1530 aa12.79□□□□□ -0.36
HNRNPU-219ENST00000639628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.75□□□□□ -0.37
HNRNPU-219ENST00000639628 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
HNRNPU-219ENST00000639628 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
HNRNPU-219ENST00000639628 RSF1Q96T23 1441 aaPredicted RBP12.69□□□□□ -0.38
HNRNPU-219ENST00000639628 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
HNRNPU-219ENST00000639628 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
HNRNPU-219ENST00000639628 DIEXFQ68CQ4 756 aaKnown RBP12.64□□□□□ -0.39
HNRNPU-219ENST00000639628 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
HNRNPU-219ENST00000639628 NACADO15069 1562 aa12.58□□□□□ -0.4
HNRNPU-219ENST00000639628 ITGAEP38570 1179 aa12.54□□□□□ -0.4
HNRNPU-219ENST00000639628 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
HNRNPU-219ENST00000639628 NEFLP07196 543 aa12.49□□□□□ -0.41
HNRNPU-219ENST00000639628 MYT1Q01538 1121 aa12.49□□□□□ -0.41
HNRNPU-219ENST00000639628 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
HNRNPU-219ENST00000639628 EEA1Q15075 1411 aa12.41□□□□□ -0.42
HNRNPU-219ENST00000639628 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
HNRNPU-219ENST00000639628 BAZ1AQ9NRL2 1556 aaPredicted RBP12.39□□□□□ -0.43
HNRNPU-219ENST00000639628 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
HNRNPU-219ENST00000639628 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
HNRNPU-219ENST00000639628 FAM50AQ14320 339 aaKnown RBP12.35□□□□□ -0.43
HNRNPU-219ENST00000639628 CEP162Q5TB80 1403 aa12.33□□□□□ -0.44
HNRNPU-219ENST00000639628 ERICH6Q7L0X2 663 aa12.32□□□□□ -0.44
HNRNPU-219ENST00000639628 GOLGA3Q08378 1498 aa12.31□□□□□ -0.44
HNRNPU-219ENST00000639628 MROH2BQ7Z745 1585 aa12.31□□□□□ -0.44
HNRNPU-219ENST00000639628 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
HNRNPU-219ENST00000639628 CLIP1P30622 1438 aa12.28□□□□□ -0.44
HNRNPU-219ENST00000639628 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
HNRNPU-219ENST00000639628 NEUROD1Q13562 356 aa12.23□□□□□ -0.45
HNRNPU-219ENST00000639628 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.45
HNRNPU-219ENST00000639628 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
HNRNPU-219ENST00000639628 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
HNRNPU-219ENST00000639628 WIZO95785 1651 aa12.17□□□□□ -0.46
HNRNPU-219ENST00000639628 P3H3Q8IVL6 736 aa12.16□□□□□ -0.46
HNRNPU-219ENST00000639628 SCAF1Q9H7N4 1312 aaKnown RBP12.16□□□□□ -0.46
HNRNPU-219ENST00000639628 SOGA1O94964 1423 aa12.15□□□□□ -0.46
HNRNPU-219ENST00000639628 ANP32CO43423 234 aa12.14□□□□□ -0.47
HNRNPU-219ENST00000639628 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
HNRNPU-219ENST00000639628 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-219ENST00000639628 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
HNRNPU-219ENST00000639628 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
HNRNPU-219ENST00000639628 POLR3GLQ9BT43 218 aa12.11□□□□□ -0.47
HNRNPU-219ENST00000639628 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
HNRNPU-219ENST00000639628 MIER1Q8N108 512 aa12.06□□□□□ -0.48
HNRNPU-219ENST00000639628 TONSLQ96HA7 1378 aa12.02□□□□□ -0.49
HNRNPU-219ENST00000639628 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
HNRNPU-219ENST00000639628 SMARCA4P51532 1647 aa12.02□□□□□ -0.49
HNRNPU-219ENST00000639628 BCANQ96GW7 911 aa12.01□□□□□ -0.49
HNRNPU-219ENST00000639628 SMARCA2P51531 1590 aa12□□□□□ -0.49
HNRNPU-219ENST00000639628 CNGB1Q14028 1251 aaPredicted RBP12□□□□□ -0.49
HNRNPU-219ENST00000639628 DDX10Q13206 875 aaKnown RBP11.97□□□□□ -0.49
HNRNPU-219ENST00000639628 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.5
HNRNPU-219ENST00000639628 MTUS2Q5JR59 1369 aa11.95□□□□□ -0.5
HNRNPU-219ENST00000639628 ARID3CA6NKF2 412 aa11.92□□□□□ -0.5
HNRNPU-219ENST00000639628 MYT1LQ9UL68 1186 aa11.92□□□□□ -0.5
HNRNPU-219ENST00000639628 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
HNRNPU-219ENST00000639628 CCNB3Q8WWL7 1395 aa11.91□□□□□ -0.5
HNRNPU-219ENST00000639628 FBLN2P98095 1184 aa11.9□□□□□ -0.5
HNRNPU-219ENST00000639628 ATAD2BQ9ULI0 1458 aa11.89□□□□□ -0.51
HNRNPU-219ENST00000639628 FKBP8Q14318 412 aa11.88□□□□□ -0.51
HNRNPU-219ENST00000639628 FHAD1B1AJZ9 1412 aa11.88□□□□□ -0.51
HNRNPU-219ENST00000639628 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
HNRNPU-219ENST00000639628 CUX2O14529 1486 aa11.87□□□□□ -0.51
HNRNPU-219ENST00000639628 CARMIL1Q5VZK9 1371 aa11.86□□□□□ -0.51
HNRNPU-219ENST00000639628 CHIC2Q9UKJ5 165 aa11.85□□□□□ -0.51
HNRNPU-219ENST00000639628 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
HNRNPU-219ENST00000639628 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
HNRNPU-219ENST00000639628 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
HNRNPU-219ENST00000639628 HNRNPUQ00839 825 aaKnown RBP eCLIP11.83□□□□□ -0.52
HNRNPU-219ENST00000639628 KANK4Q5T7N3 995 aaPredicted RBP11.82□□□□□ -0.52
HNRNPU-219ENST00000639628 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
HNRNPU-219ENST00000639628 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
HNRNPU-219ENST00000639628 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.53
HNRNPU-219ENST00000639628 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms