RNA–Protein interactions for RNA: ENST00000418766.5

TTC3-207, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-207ENST00000418766 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
TTC3-207ENST00000418766 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
TTC3-207ENST00000418766 SUPT5HO00267 1087 aaKnown RBP28.25■■■□□ 2.11
TTC3-207ENST00000418766 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
TTC3-207ENST00000418766 PCGF6Q9BYE7 350 aa27.1■■□□□ 1.93
TTC3-207ENST00000418766 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
TTC3-207ENST00000418766 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
TTC3-207ENST00000418766 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
TTC3-207ENST00000418766 HRCP23327 699 aa26.66■■□□□ 1.86
TTC3-207ENST00000418766 LOC105371045A0A1W2PR82 267 aa26.61■■□□□ 1.85
TTC3-207ENST00000418766 MYO15BQ96JP2 1530 aa26.43■■□□□ 1.82
TTC3-207ENST00000418766 FAM9AQ8IZU1 332 aaPredicted RBP26.36■■□□□ 1.81
TTC3-207ENST00000418766 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
TTC3-207ENST00000418766 TRIM41Q8WV44 630 aa25.87■■□□□ 1.73
TTC3-207ENST00000418766 TRIM26Q12899 539 aaPredicted RBP25.85■■□□□ 1.73
TTC3-207ENST00000418766 TTBK1Q5TCY1 1321 aaPredicted RBP25.83■■□□□ 1.73
TTC3-207ENST00000418766 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
TTC3-207ENST00000418766 DCAF1Q9Y4B6 1507 aa25.38■■□□□ 1.65
TTC3-207ENST00000418766 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
TTC3-207ENST00000418766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.33■■□□□ 1.65
TTC3-207ENST00000418766 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
TTC3-207ENST00000418766 PELP1Q8IZL8 1130 aaKnown RBP25.22■■□□□ 1.63
TTC3-207ENST00000418766 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
TTC3-207ENST00000418766 RANGAP1P46060 587 aaPredicted RBP25.03■■□□□ 1.6
TTC3-207ENST00000418766 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
TTC3-207ENST00000418766 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
TTC3-207ENST00000418766 YTHDC1Q96MU7 727 aaKnown RBP24.95■■□□□ 1.59
TTC3-207ENST00000418766 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
TTC3-207ENST00000418766 ABCC9O60706 1549 aa24.87■■□□□ 1.57
TTC3-207ENST00000418766 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
TTC3-207ENST00000418766 RB1CC1Q8TDY2 1594 aa24.72■■□□□ 1.55
TTC3-207ENST00000418766 NEUROD1Q13562 356 aa24.71■■□□□ 1.55
TTC3-207ENST00000418766 GTF3C3Q9Y5Q9 886 aa24.69■■□□□ 1.54
TTC3-207ENST00000418766 HNRNPUL2Q1KMD3 747 aaKnown RBP24.69■■□□□ 1.54
TTC3-207ENST00000418766 CENPBP07199 599 aaPredicted RBP24.68■■□□□ 1.54
TTC3-207ENST00000418766 CECR2Q9BXF3 1484 aa24.64■■□□□ 1.53
TTC3-207ENST00000418766 ACIN1Q9UKV3 1341 aaKnown RBP24.6■■□□□ 1.53
TTC3-207ENST00000418766 APLP2Q06481 763 aa24.47■■□□□ 1.51
TTC3-207ENST00000418766 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
TTC3-207ENST00000418766 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
TTC3-207ENST00000418766 MYT1Q01538 1121 aa24.28■■□□□ 1.48
TTC3-207ENST00000418766 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
TTC3-207ENST00000418766 ZNF316A6NFI3 1004 aaPredicted RBP24.26■■□□□ 1.47
TTC3-207ENST00000418766 WIZO95785 1651 aa24.21■■□□□ 1.47
TTC3-207ENST00000418766 ITGAEP38570 1179 aa24.2■■□□□ 1.46
TTC3-207ENST00000418766 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
TTC3-207ENST00000418766 MIER1Q8N108 512 aa24.16■■□□□ 1.46
TTC3-207ENST00000418766 SOGA1O94964 1423 aa24.15■■□□□ 1.46
TTC3-207ENST00000418766 CEP162Q5TB80 1403 aa24.14■■□□□ 1.45
TTC3-207ENST00000418766 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
TTC3-207ENST00000418766 RUSC2Q8N2Y8 1516 aa23.97■■□□□ 1.43
TTC3-207ENST00000418766 ATP1B4Q9UN42 357 aaPredicted RBP23.93■■□□□ 1.42
TTC3-207ENST00000418766 TNIKQ9UKE5 1360 aa23.83■■□□□ 1.41
TTC3-207ENST00000418766 NACADO15069 1562 aa23.83■■□□□ 1.41
TTC3-207ENST00000418766 BCANQ96GW7 911 aa23.75■■□□□ 1.39
TTC3-207ENST00000418766 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
TTC3-207ENST00000418766 CLIP1P30622 1438 aa23.72■■□□□ 1.39
TTC3-207ENST00000418766 GOLGA3Q08378 1498 aa23.66■■□□□ 1.38
TTC3-207ENST00000418766 WRNQ14191 1432 aaPredicted RBP eCLIP23.66■■□□□ 1.38
TTC3-207ENST00000418766 HIRIP3Q9BW71 556 aaPredicted RBP23.56■■□□□ 1.36
TTC3-207ENST00000418766 P3H3Q8IVL6 736 aa23.54■■□□□ 1.36
TTC3-207ENST00000418766 KANK4Q5T7N3 995 aaPredicted RBP23.52■■□□□ 1.36
TTC3-207ENST00000418766 FAM50AQ14320 339 aaKnown RBP23.52■■□□□ 1.36
TTC3-207ENST00000418766 TOP2AP11388 1531 aaKnown RBP23.51■■□□□ 1.35
TTC3-207ENST00000418766 EEA1Q15075 1411 aa23.47■■□□□ 1.35
TTC3-207ENST00000418766 SMARCA2P51531 1590 aa23.46■■□□□ 1.35
TTC3-207ENST00000418766 KCNH8Q96L42 1107 aa23.43■■□□□ 1.34
TTC3-207ENST00000418766 DDX10Q13206 875 aaKnown RBP23.42■■□□□ 1.34
TTC3-207ENST00000418766 CEP164Q9UPV0 1460 aa23.42■■□□□ 1.34
TTC3-207ENST00000418766 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
TTC3-207ENST00000418766 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
TTC3-207ENST00000418766 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
TTC3-207ENST00000418766 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
TTC3-207ENST00000418766 CNGB1Q14028 1251 aaPredicted RBP23.31■■□□□ 1.32
TTC3-207ENST00000418766 TRIM52Q96A61 297 aa23.3■■□□□ 1.32
TTC3-207ENST00000418766 SIN3AQ96ST3 1273 aa23.29■■□□□ 1.32
TTC3-207ENST00000418766 FKBP8Q14318 412 aa23.29■■□□□ 1.32
TTC3-207ENST00000418766 NEFLP07196 543 aa23.27■■□□□ 1.32
TTC3-207ENST00000418766 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
TTC3-207ENST00000418766 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
TTC3-207ENST00000418766 DHX57Q6P158 1386 aaKnown RBP23.19■■□□□ 1.3
TTC3-207ENST00000418766 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
TTC3-207ENST00000418766 IRX6P78412 446 aaPredicted RBP23.09■■□□□ 1.29
TTC3-207ENST00000418766 ARID3CA6NKF2 412 aa23.06■■□□□ 1.28
TTC3-207ENST00000418766 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
TTC3-207ENST00000418766 TSHZ2Q9NRE2 1034 aa23.05■■□□□ 1.28
TTC3-207ENST00000418766 KIF21BO75037 1637 aa23.04■■□□□ 1.28
TTC3-207ENST00000418766 ANP32CO43423 234 aa23.04■■□□□ 1.28
TTC3-207ENST00000418766 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
TTC3-207ENST00000418766 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
TTC3-207ENST00000418766 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
TTC3-207ENST00000418766 RAB3GAP2Q9H2M9 1393 aa22.98■■□□□ 1.27
TTC3-207ENST00000418766 CLSPNQ9HAW4 1339 aa22.94■■□□□ 1.26
TTC3-207ENST00000418766 SENP3-EIF4A1A0A087X0R7 540 aa22.91■■□□□ 1.26
TTC3-207ENST00000418766 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
TTC3-207ENST00000418766 ERICH6Q7L0X2 663 aa22.91■■□□□ 1.26
TTC3-207ENST00000418766 CHIC2Q9UKJ5 165 aa22.9■■□□□ 1.26
TTC3-207ENST00000418766 ARAP1Q96P48 1450 aa22.9■■□□□ 1.26
TTC3-207ENST00000418766 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.25
TTC3-207ENST00000418766 UNC13AQ9UPW8 1703 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms