RNA–Protein interactions for RNA: ENST00000222574.8

HBP1-201, Transcript of HMG-box transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HBP1, Length 2,829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBP1-201ENST00000222574 NISCHQ9Y2I1 1504 aa29.61■■■□□ 2.33
HBP1-201ENST00000222574 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
HBP1-201ENST00000222574 MYT1Q01538 1121 aa25.6■■□□□ 1.69
HBP1-201ENST00000222574 CCDC180Q9P1Z9 1646 aa25.54■■□□□ 1.68
HBP1-201ENST00000222574 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
HBP1-201ENST00000222574 SUPT5HO00267 1087 aaKnown RBP25.03■■□□□ 1.6
HBP1-201ENST00000222574 PRKCSHP14314 528 aaPredicted RBP25.01■■□□□ 1.59
HBP1-201ENST00000222574 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
HBP1-201ENST00000222574 ABCC9O60706 1549 aa24.82■■□□□ 1.56
HBP1-201ENST00000222574 HRCP23327 699 aa24.72■■□□□ 1.55
HBP1-201ENST00000222574 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
HBP1-201ENST00000222574 DCAF8L2P0C7V8 631 aa24.64■■□□□ 1.53
HBP1-201ENST00000222574 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
HBP1-201ENST00000222574 TTBK1Q5TCY1 1321 aaPredicted RBP24.51■■□□□ 1.51
HBP1-201ENST00000222574 BCL11AQ9H165 835 aa24.39■■□□□ 1.49
HBP1-201ENST00000222574 DCAF1Q9Y4B6 1507 aa24.37■■□□□ 1.49
HBP1-201ENST00000222574 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
HBP1-201ENST00000222574 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
HBP1-201ENST00000222574 PCGF6Q9BYE7 350 aa24.21■■□□□ 1.47
HBP1-201ENST00000222574 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
HBP1-201ENST00000222574 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
HBP1-201ENST00000222574 NACADO15069 1562 aa23.93■■□□□ 1.42
HBP1-201ENST00000222574 APLP2Q06481 763 aa23.91■■□□□ 1.42
HBP1-201ENST00000222574 LOC105371045A0A1W2PR82 267 aa23.87■■□□□ 1.41
HBP1-201ENST00000222574 ERICH6Q7L0X2 663 aa23.8■■□□□ 1.4
HBP1-201ENST00000222574 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
HBP1-201ENST00000222574 SLC24A1O60721 1099 aa23.58■■□□□ 1.37
HBP1-201ENST00000222574 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
HBP1-201ENST00000222574 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
HBP1-201ENST00000222574 GTF3C3Q9Y5Q9 886 aa23.35■■□□□ 1.33
HBP1-201ENST00000222574 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.33
HBP1-201ENST00000222574 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
HBP1-201ENST00000222574 ACIN1Q9UKV3 1341 aaKnown RBP23.26■■□□□ 1.31
HBP1-201ENST00000222574 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
HBP1-201ENST00000222574 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
HBP1-201ENST00000222574 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
HBP1-201ENST00000222574 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.28
HBP1-201ENST00000222574 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
HBP1-201ENST00000222574 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
HBP1-201ENST00000222574 TRIM41Q8WV44 630 aa22.98■■□□□ 1.27
HBP1-201ENST00000222574 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
HBP1-201ENST00000222574 ANP32EQ9BTT0 268 aa22.95■■□□□ 1.26
HBP1-201ENST00000222574 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
HBP1-201ENST00000222574 ANO8Q9HCE9 1232 aaPredicted RBP22.84■■□□□ 1.25
HBP1-201ENST00000222574 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
HBP1-201ENST00000222574 WIZO95785 1651 aa22.8■■□□□ 1.24
HBP1-201ENST00000222574 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
HBP1-201ENST00000222574 EIF5BO60841 1220 aaKnown RBP22.72■■□□□ 1.23
HBP1-201ENST00000222574 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
HBP1-201ENST00000222574 SMARCA4P51532 1647 aa22.68■■□□□ 1.22
HBP1-201ENST00000222574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
HBP1-201ENST00000222574 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
HBP1-201ENST00000222574 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
HBP1-201ENST00000222574 DAXXQ9UER7 740 aaPredicted RBP22.55■■□□□ 1.2
HBP1-201ENST00000222574 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
HBP1-201ENST00000222574 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
HBP1-201ENST00000222574 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
HBP1-201ENST00000222574 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
HBP1-201ENST00000222574 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
HBP1-201ENST00000222574 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
HBP1-201ENST00000222574 UBE2Q2Q8WVN8 375 aa22.31■■□□□ 1.16
HBP1-201ENST00000222574 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
HBP1-201ENST00000222574 ATAD2BQ9ULI0 1458 aa22.24■■□□□ 1.15
HBP1-201ENST00000222574 DIEXFQ68CQ4 756 aaKnown RBP22.19■■□□□ 1.14
HBP1-201ENST00000222574 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
HBP1-201ENST00000222574 YTHDC1Q96MU7 727 aaKnown RBP22.13■■□□□ 1.13
HBP1-201ENST00000222574 TSHZ2Q9NRE2 1034 aa22.11■■□□□ 1.13
HBP1-201ENST00000222574 PODXL2Q9NZ53 605 aa22.08■■□□□ 1.13
HBP1-201ENST00000222574 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
HBP1-201ENST00000222574 NCAPD3P42695 1498 aa22.02■■□□□ 1.11
HBP1-201ENST00000222574 PKNOX2Q96KN3 472 aa21.99■■□□□ 1.11
HBP1-201ENST00000222574 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
HBP1-201ENST00000222574 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.95■■□□□ 1.1
HBP1-201ENST00000222574 UBTFP17480 764 aaKnown RBP21.94■■□□□ 1.1
HBP1-201ENST00000222574 SOGA1O94964 1423 aa21.92■■□□□ 1.1
HBP1-201ENST00000222574 CEP162Q5TB80 1403 aa21.89■■□□□ 1.09
HBP1-201ENST00000222574 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
HBP1-201ENST00000222574 RANGAP1P46060 587 aaPredicted RBP21.87■■□□□ 1.09
HBP1-201ENST00000222574 RUSC2Q8N2Y8 1516 aa21.86■■□□□ 1.09
HBP1-201ENST00000222574 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.085e-6■■■■■ 29.2
HBP1-201ENST00000222574 ZNF316A6NFI3 1004 aaPredicted RBP21.78■■□□□ 1.08
HBP1-201ENST00000222574 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
HBP1-201ENST00000222574 MIER1Q8N108 512 aa21.75■■□□□ 1.07
HBP1-201ENST00000222574 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
HBP1-201ENST00000222574 SUPT16HQ9Y5B9 1047 aaKnown RBP21.66■■□□□ 1.06
HBP1-201ENST00000222574 TNIKQ9UKE5 1360 aa21.63■■□□□ 1.05
HBP1-201ENST00000222574 EEA1Q15075 1411 aa21.6■■□□□ 1.05
HBP1-201ENST00000222574 DEKP35659 375 aaKnown RBP21.58■■□□□ 1.05
HBP1-201ENST00000222574 CFTRP13569 1480 aa21.58■■□□□ 1.05
HBP1-201ENST00000222574 RTN4Q9NQC3 1192 aaKnown RBP21.56■■□□□ 1.04
HBP1-201ENST00000222574 CUX2O14529 1486 aa21.55■■□□□ 1.04
HBP1-201ENST00000222574 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
HBP1-201ENST00000222574 MSH5O43196 834 aa21.52■■□□□ 1.04
HBP1-201ENST00000222574 TOP2BQ02880 1626 aa21.52■■□□□ 1.03
HBP1-201ENST00000222574 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
HBP1-201ENST00000222574 ERCC6Q03468 1493 aa21.47■■□□□ 1.03
HBP1-201ENST00000222574 BIVM-ERCC5R4GMW8 1640 aa21.46■■□□□ 1.03
HBP1-201ENST00000222574 GOLGA3Q08378 1498 aa21.45■■□□□ 1.02
HBP1-201ENST00000222574 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
HBP1-201ENST00000222574 CUX1P39880 1505 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms