RNA–Protein interactions for RNA: ENST00000566496.5

ZC3H18-208, Transcript of zinc finger CCCH-type containing 18, humanhuman

TSL 2

Gene ZC3H18, Length 1,949 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H18-208ENST00000566496 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
ZC3H18-208ENST00000566496 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
ZC3H18-208ENST00000566496 ABCC9O60706 1549 aa24.15■■□□□ 1.46
ZC3H18-208ENST00000566496 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
ZC3H18-208ENST00000566496 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
ZC3H18-208ENST00000566496 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
ZC3H18-208ENST00000566496 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
ZC3H18-208ENST00000566496 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
ZC3H18-208ENST00000566496 NACADO15069 1562 aa23.25■■□□□ 1.31
ZC3H18-208ENST00000566496 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
ZC3H18-208ENST00000566496 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
ZC3H18-208ENST00000566496 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
ZC3H18-208ENST00000566496 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
ZC3H18-208ENST00000566496 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.25e-10■■■■□ 21.8
ZC3H18-208ENST00000566496 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
ZC3H18-208ENST00000566496 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
ZC3H18-208ENST00000566496 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
ZC3H18-208ENST00000566496 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
ZC3H18-208ENST00000566496 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
ZC3H18-208ENST00000566496 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
ZC3H18-208ENST00000566496 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
ZC3H18-208ENST00000566496 WIZO95785 1651 aa22■■□□□ 1.11
ZC3H18-208ENST00000566496 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
ZC3H18-208ENST00000566496 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
ZC3H18-208ENST00000566496 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
ZC3H18-208ENST00000566496 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
ZC3H18-208ENST00000566496 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
ZC3H18-208ENST00000566496 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
ZC3H18-208ENST00000566496 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
ZC3H18-208ENST00000566496 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
ZC3H18-208ENST00000566496 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
ZC3H18-208ENST00000566496 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
ZC3H18-208ENST00000566496 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
ZC3H18-208ENST00000566496 TRIM41Q8WV44 630 aa21.27■■□□□ 1
ZC3H18-208ENST00000566496 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
ZC3H18-208ENST00000566496 CFTRP13569 1480 aa21.01■□□□□ 0.95
ZC3H18-208ENST00000566496 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
ZC3H18-208ENST00000566496 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
ZC3H18-208ENST00000566496 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
ZC3H18-208ENST00000566496 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
ZC3H18-208ENST00000566496 NESP48681 1621 aa20.87■□□□□ 0.93
ZC3H18-208ENST00000566496 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
ZC3H18-208ENST00000566496 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
ZC3H18-208ENST00000566496 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
ZC3H18-208ENST00000566496 PRDM2Q13029 1718 aa20.83■□□□□ 0.93
ZC3H18-208ENST00000566496 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
ZC3H18-208ENST00000566496 SOGA1O94964 1423 aa20.75■□□□□ 0.91
ZC3H18-208ENST00000566496 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
ZC3H18-208ENST00000566496 CUX1P39880 1505 aa20.73■□□□□ 0.91
ZC3H18-208ENST00000566496 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
ZC3H18-208ENST00000566496 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
ZC3H18-208ENST00000566496 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
ZC3H18-208ENST00000566496 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
ZC3H18-208ENST00000566496 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
ZC3H18-208ENST00000566496 CUX2O14529 1486 aa20.63■□□□□ 0.89
ZC3H18-208ENST00000566496 EEA1Q15075 1411 aa20.62■□□□□ 0.89
ZC3H18-208ENST00000566496 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
ZC3H18-208ENST00000566496 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
ZC3H18-208ENST00000566496 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
ZC3H18-208ENST00000566496 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
ZC3H18-208ENST00000566496 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
ZC3H18-208ENST00000566496 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
ZC3H18-208ENST00000566496 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
ZC3H18-208ENST00000566496 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
ZC3H18-208ENST00000566496 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
ZC3H18-208ENST00000566496 WDR62O43379 1518 aa20.41■□□□□ 0.86
ZC3H18-208ENST00000566496 POLA1P09884 1462 aaPredicted RBP20.4■□□□□ 0.86
ZC3H18-208ENST00000566496 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
ZC3H18-208ENST00000566496 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
ZC3H18-208ENST00000566496 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
ZC3H18-208ENST00000566496 KIF21BO75037 1637 aa20.36■□□□□ 0.85
ZC3H18-208ENST00000566496 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
ZC3H18-208ENST00000566496 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
ZC3H18-208ENST00000566496 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
ZC3H18-208ENST00000566496 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
ZC3H18-208ENST00000566496 IGF1RP08069 1367 aa20.26■□□□□ 0.83
ZC3H18-208ENST00000566496 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
ZC3H18-208ENST00000566496 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
ZC3H18-208ENST00000566496 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
ZC3H18-208ENST00000566496 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
ZC3H18-208ENST00000566496 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
ZC3H18-208ENST00000566496 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
ZC3H18-208ENST00000566496 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
ZC3H18-208ENST00000566496 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
ZC3H18-208ENST00000566496 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
ZC3H18-208ENST00000566496 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
ZC3H18-208ENST00000566496 CLIP1P30622 1438 aa20.08■□□□□ 0.81
ZC3H18-208ENST00000566496 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.82e-7■■■■■ 36.7
ZC3H18-208ENST00000566496 DNAJC5Q9H3Z4 198 aa20.06■□□□□ 0.8
ZC3H18-208ENST00000566496 CUL7Q14999 1698 aa20.05■□□□□ 0.8
ZC3H18-208ENST00000566496 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
ZC3H18-208ENST00000566496 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
ZC3H18-208ENST00000566496 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
ZC3H18-208ENST00000566496 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
ZC3H18-208ENST00000566496 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
ZC3H18-208ENST00000566496 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
ZC3H18-208ENST00000566496 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
ZC3H18-208ENST00000566496 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.78
ZC3H18-208ENST00000566496 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
ZC3H18-208ENST00000566496 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms