RNA–Protein interactions for RNA: ENST00000355666.5

TTC3-202, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TTC3, Length 7,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-202ENST00000355666 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
TTC3-202ENST00000355666 DCAF8L2P0C7V8 631 aa17.63■□□□□ 0.41
TTC3-202ENST00000355666 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.35
TTC3-202ENST00000355666 CCDC180Q9P1Z9 1646 aa17.12■□□□□ 0.33
TTC3-202ENST00000355666 SUPT5HO00267 1087 aaKnown RBP17.03■□□□□ 0.32
TTC3-202ENST00000355666 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
TTC3-202ENST00000355666 ABCC9O60706 1549 aa16.43■□□□□ 0.22
TTC3-202ENST00000355666 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
TTC3-202ENST00000355666 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
TTC3-202ENST00000355666 NACADO15069 1562 aa16.1■□□□□ 0.17
TTC3-202ENST00000355666 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
TTC3-202ENST00000355666 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
TTC3-202ENST00000355666 RB1CC1Q8TDY2 1594 aa16.01■□□□□ 0.15
TTC3-202ENST00000355666 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
TTC3-202ENST00000355666 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
TTC3-202ENST00000355666 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
TTC3-202ENST00000355666 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
TTC3-202ENST00000355666 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
TTC3-202ENST00000355666 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
TTC3-202ENST00000355666 PCGF6Q9BYE7 350 aa15.56■□□□□ 0.08
TTC3-202ENST00000355666 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
TTC3-202ENST00000355666 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.08
TTC3-202ENST00000355666 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
TTC3-202ENST00000355666 APLP2Q06481 763 aa15.43■□□□□ 0.06
TTC3-202ENST00000355666 UBTFP17480 764 aaKnown RBP15.43■□□□□ 0.06
TTC3-202ENST00000355666 TRIM26Q12899 539 aaPredicted RBP15.36■□□□□ 0.05
TTC3-202ENST00000355666 WIZO95785 1651 aa15.31■□□□□ 0.04
TTC3-202ENST00000355666 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
TTC3-202ENST00000355666 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.03
TTC3-202ENST00000355666 BAZ1BQ9UIG0 1483 aaKnown RBP15.26■□□□□ 0.03
TTC3-202ENST00000355666 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
TTC3-202ENST00000355666 RANGAP1P46060 587 aaPredicted RBP15.19■□□□□ 0.02
TTC3-202ENST00000355666 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
TTC3-202ENST00000355666 TTBK1Q5TCY1 1321 aaPredicted RBP15.19■□□□□ 0.02
TTC3-202ENST00000355666 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
TTC3-202ENST00000355666 HRCP23327 699 aa15.16■□□□□ 0.02
TTC3-202ENST00000355666 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
TTC3-202ENST00000355666 EEA1Q15075 1411 aa15.11■□□□□ 0.01
TTC3-202ENST00000355666 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
TTC3-202ENST00000355666 WRNQ14191 1432 aaPredicted RBP eCLIP15.08■□□□□ 0
TTC3-202ENST00000355666 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
TTC3-202ENST00000355666 CCER1Q8TC90 406 aaPredicted RBP15.04■□□□□ -0
TTC3-202ENST00000355666 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
TTC3-202ENST00000355666 BICRAQ9NZM4 1560 aa14.98□□□□□ -0.01
TTC3-202ENST00000355666 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
TTC3-202ENST00000355666 GOLGA3Q08378 1498 aa14.93□□□□□ -0.02
TTC3-202ENST00000355666 ATP1B4Q9UN42 357 aaPredicted RBP14.91□□□□□ -0.02
TTC3-202ENST00000355666 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
TTC3-202ENST00000355666 CEP164Q9UPV0 1460 aa14.87□□□□□ -0.03
TTC3-202ENST00000355666 CEP162Q5TB80 1403 aa14.85□□□□□ -0.03
TTC3-202ENST00000355666 SOGA1O94964 1423 aa14.85□□□□□ -0.03
TTC3-202ENST00000355666 EIF4G1Q04637 1599 aaKnown RBP14.83□□□□□ -0.03
TTC3-202ENST00000355666 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
TTC3-202ENST00000355666 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
TTC3-202ENST00000355666 KIF27Q86VH2 1401 aa14.8□□□□□ -0.04
TTC3-202ENST00000355666 CLIP1P30622 1438 aa14.79□□□□□ -0.04
TTC3-202ENST00000355666 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
TTC3-202ENST00000355666 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
TTC3-202ENST00000355666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
TTC3-202ENST00000355666 CADPSQ9ULU8 1353 aa14.7□□□□□ -0.06
TTC3-202ENST00000355666 CUX2O14529 1486 aa14.62□□□□□ -0.07
TTC3-202ENST00000355666 ITGAEP38570 1179 aa14.61□□□□□ -0.07
TTC3-202ENST00000355666 RUSC2Q8N2Y8 1516 aa14.6□□□□□ -0.07
TTC3-202ENST00000355666 SYNJ1O43426 1573 aa14.59□□□□□ -0.07
TTC3-202ENST00000355666 CFTRP13569 1480 aa14.59□□□□□ -0.07
TTC3-202ENST00000355666 PDS5BQ9NTI5 1447 aa14.56□□□□□ -0.08
TTC3-202ENST00000355666 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
TTC3-202ENST00000355666 TOP2BQ02880 1626 aa14.55□□□□□ -0.08
TTC3-202ENST00000355666 P3H3Q8IVL6 736 aa14.54□□□□□ -0.08
TTC3-202ENST00000355666 VPS8Q8N3P4 1428 aa14.54□□□□□ -0.08
TTC3-202ENST00000355666 CARMIL1Q5VZK9 1371 aa14.53□□□□□ -0.08
TTC3-202ENST00000355666 FANCD2Q9BXW9 1451 aa14.53□□□□□ -0.08
TTC3-202ENST00000355666 KIF21BO75037 1637 aa14.53□□□□□ -0.08
TTC3-202ENST00000355666 FAM50AQ14320 339 aaKnown RBP14.52□□□□□ -0.08
TTC3-202ENST00000355666 RAPGEF2Q9Y4G8 1499 aa14.52□□□□□ -0.08
TTC3-202ENST00000355666 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
TTC3-202ENST00000355666 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
TTC3-202ENST00000355666 ERICH3Q5RHP9 1530 aa14.43□□□□□ -0.1
TTC3-202ENST00000355666 CUX1P39880 1505 aa14.43□□□□□ -0.1
TTC3-202ENST00000355666 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
TTC3-202ENST00000355666 FBLN2P98095 1184 aa14.42□□□□□ -0.1
TTC3-202ENST00000355666 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
TTC3-202ENST00000355666 ERCC6Q03468 1493 aa14.39□□□□□ -0.11
TTC3-202ENST00000355666 DIEXFQ68CQ4 756 aaKnown RBP14.36□□□□□ -0.11
TTC3-202ENST00000355666 CDK11AQ9UQ88 783 aaPredicted RBP14.34□□□□□ -0.11
TTC3-202ENST00000355666 IGF1RP08069 1367 aa14.34□□□□□ -0.11
TTC3-202ENST00000355666 MTUS2Q5JR59 1369 aa14.33□□□□□ -0.12
TTC3-202ENST00000355666 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
TTC3-202ENST00000355666 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
TTC3-202ENST00000355666 ZNF316A6NFI3 1004 aaPredicted RBP14.31□□□□□ -0.12
TTC3-202ENST00000355666 DNMBPQ6XZF7 1577 aa14.31□□□□□ -0.12
TTC3-202ENST00000355666 CHMP7Q8WUX9 453 aaPredicted RBP14.3□□□□□ -0.12
TTC3-202ENST00000355666 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
TTC3-202ENST00000355666 NESP48681 1621 aa14.28□□□□□ -0.12
TTC3-202ENST00000355666 RAD54L2Q9Y4B4 1467 aa14.28□□□□□ -0.12
TTC3-202ENST00000355666 TOPBP1Q92547 1522 aa14.27□□□□□ -0.12
TTC3-202ENST00000355666 FMN1Q68DA7 1419 aa14.26□□□□□ -0.13
TTC3-202ENST00000355666 CCNB3Q8WWL7 1395 aa14.25□□□□□ -0.13
TTC3-202ENST00000355666 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
TTC3-202ENST00000355666 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms