RNA–Protein interactions for RNA: ENST00000440865.2

HNRNPU-204, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2 BASIC

Gene HNRNPU, Length 3,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-204ENST00000440865 NISCHQ9Y2I1 1504 aa30.06■■■□□ 2.4
HNRNPU-204ENST00000440865 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
HNRNPU-204ENST00000440865 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
HNRNPU-204ENST00000440865 HRCP23327 699 aa25.62■■□□□ 1.69
HNRNPU-204ENST00000440865 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
HNRNPU-204ENST00000440865 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
HNRNPU-204ENST00000440865 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
HNRNPU-204ENST00000440865 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
HNRNPU-204ENST00000440865 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
HNRNPU-204ENST00000440865 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
HNRNPU-204ENST00000440865 PPARGC1BQ86YN6 1023 aaKnown RBP25.07■■□□□ 1.6
HNRNPU-204ENST00000440865 LOC105371045A0A1W2PR82 267 aa24.89■■□□□ 1.58
HNRNPU-204ENST00000440865 DCAF1Q9Y4B6 1507 aa24.84■■□□□ 1.57
HNRNPU-204ENST00000440865 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
HNRNPU-204ENST00000440865 ZEB1P37275 1124 aaPredicted RBP24.46■■□□□ 1.51
HNRNPU-204ENST00000440865 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
HNRNPU-204ENST00000440865 FAM9AQ8IZU1 332 aaPredicted RBP24.29■■□□□ 1.48
HNRNPU-204ENST00000440865 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
HNRNPU-204ENST00000440865 PELP1Q8IZL8 1130 aaKnown RBP24.17■■□□□ 1.46
HNRNPU-204ENST00000440865 ABCC9O60706 1549 aa24.1■■□□□ 1.45
HNRNPU-204ENST00000440865 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
HNRNPU-204ENST00000440865 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
HNRNPU-204ENST00000440865 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
HNRNPU-204ENST00000440865 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.4
HNRNPU-204ENST00000440865 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
HNRNPU-204ENST00000440865 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
HNRNPU-204ENST00000440865 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.37
HNRNPU-204ENST00000440865 CENPBP07199 599 aaPredicted RBP23.54■■□□□ 1.36
HNRNPU-204ENST00000440865 TTBK1Q5TCY1 1321 aaPredicted RBP23.53■■□□□ 1.36
HNRNPU-204ENST00000440865 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
HNRNPU-204ENST00000440865 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
HNRNPU-204ENST00000440865 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
HNRNPU-204ENST00000440865 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
HNRNPU-204ENST00000440865 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.34
HNRNPU-204ENST00000440865 WIZO95785 1651 aa23.29■■□□□ 1.32
HNRNPU-204ENST00000440865 NACADO15069 1562 aa23.27■■□□□ 1.32
HNRNPU-204ENST00000440865 UBTFP17480 764 aaKnown RBP23.21■■□□□ 1.31
HNRNPU-204ENST00000440865 CEP162Q5TB80 1403 aa23.16■■□□□ 1.3
HNRNPU-204ENST00000440865 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
HNRNPU-204ENST00000440865 MYT1Q01538 1121 aa23.13■■□□□ 1.29
HNRNPU-204ENST00000440865 YTHDC1Q96MU7 727 aaKnown RBP23.13■■□□□ 1.29
HNRNPU-204ENST00000440865 WRNQ14191 1432 aaPredicted RBP eCLIP23.13■■□□□ 1.29
HNRNPU-204ENST00000440865 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
HNRNPU-204ENST00000440865 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
HNRNPU-204ENST00000440865 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
HNRNPU-204ENST00000440865 ABCC8Q09428 1581 aa23.06■■□□□ 1.28
HNRNPU-204ENST00000440865 TNIKQ9UKE5 1360 aa23.05■■□□□ 1.28
HNRNPU-204ENST00000440865 SOGA1O94964 1423 aa23■■□□□ 1.27
HNRNPU-204ENST00000440865 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
HNRNPU-204ENST00000440865 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
HNRNPU-204ENST00000440865 EEA1Q15075 1411 aa22.94■■□□□ 1.26
HNRNPU-204ENST00000440865 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
HNRNPU-204ENST00000440865 APLP2Q06481 763 aa22.9■■□□□ 1.26
HNRNPU-204ENST00000440865 MIER1Q8N108 512 aa22.87■■□□□ 1.25
HNRNPU-204ENST00000440865 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
HNRNPU-204ENST00000440865 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
HNRNPU-204ENST00000440865 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
HNRNPU-204ENST00000440865 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
HNRNPU-204ENST00000440865 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
HNRNPU-204ENST00000440865 CLIP1P30622 1438 aa22.67■■□□□ 1.22
HNRNPU-204ENST00000440865 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
HNRNPU-204ENST00000440865 VPS8Q8N3P4 1428 aa22.56■■□□□ 1.2
HNRNPU-204ENST00000440865 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
HNRNPU-204ENST00000440865 KIF21BO75037 1637 aa22.44■■□□□ 1.18
HNRNPU-204ENST00000440865 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
HNRNPU-204ENST00000440865 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.18
HNRNPU-204ENST00000440865 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
HNRNPU-204ENST00000440865 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
HNRNPU-204ENST00000440865 SUPT16HQ9Y5B9 1047 aaKnown RBP22.33■■□□□ 1.17
HNRNPU-204ENST00000440865 DHX57Q6P158 1386 aaKnown RBP22.31■■□□□ 1.16
HNRNPU-204ENST00000440865 ITGAEP38570 1179 aa22.26■■□□□ 1.15
HNRNPU-204ENST00000440865 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
HNRNPU-204ENST00000440865 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
HNRNPU-204ENST00000440865 PEG3Q9GZU2 1588 aa22.15■■□□□ 1.14
HNRNPU-204ENST00000440865 ATAD2BQ9ULI0 1458 aa22.14■■□□□ 1.14
HNRNPU-204ENST00000440865 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
HNRNPU-204ENST00000440865 TSHZ2Q9NRE2 1034 aa22.08■■□□□ 1.12
HNRNPU-204ENST00000440865 BICRAQ9NZM4 1560 aa22.06■■□□□ 1.12
HNRNPU-204ENST00000440865 ARAP1Q96P48 1450 aa22.06■■□□□ 1.12
HNRNPU-204ENST00000440865 BCANQ96GW7 911 aa22.05■■□□□ 1.12
HNRNPU-204ENST00000440865 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
HNRNPU-204ENST00000440865 TOP2BQ02880 1626 aa22.02■■□□□ 1.12
HNRNPU-204ENST00000440865 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
HNRNPU-204ENST00000440865 PRXQ9BXM0 1461 aa22.02■■□□□ 1.12
HNRNPU-204ENST00000440865 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
HNRNPU-204ENST00000440865 NEFLP07196 543 aa21.98■■□□□ 1.11
HNRNPU-204ENST00000440865 KIF27Q86VH2 1401 aa21.98■■□□□ 1.11
HNRNPU-204ENST00000440865 DDX10Q13206 875 aaKnown RBP21.97■■□□□ 1.11
HNRNPU-204ENST00000440865 ANP32EQ9BTT0 268 aa21.96■■□□□ 1.11
HNRNPU-204ENST00000440865 FKBP8Q14318 412 aa21.96■■□□□ 1.11
HNRNPU-204ENST00000440865 RAB3GAP2Q9H2M9 1393 aa21.94■■□□□ 1.1
HNRNPU-204ENST00000440865 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
HNRNPU-204ENST00000440865 CUX2O14529 1486 aa21.88■■□□□ 1.09
HNRNPU-204ENST00000440865 BCL11AQ9H165 835 aa21.87■■□□□ 1.09
HNRNPU-204ENST00000440865 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
HNRNPU-204ENST00000440865 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
HNRNPU-204ENST00000440865 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
HNRNPU-204ENST00000440865 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.09
HNRNPU-204ENST00000440865 SETD5Q9C0A6 1442 aa21.82■■□□□ 1.08
HNRNPU-204ENST00000440865 ANP32CO43423 234 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms