RNA–Protein interactions for RNA: ENST00000465637.5

GGCX-206, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-206ENST00000465637 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
GGCX-206ENST00000465637 AEBP2Q6ZN18 517 aaPredicted RBP28.27■■■□□ 2.12
GGCX-206ENST00000465637 CCDC180Q9P1Z9 1646 aa27.89■■■□□ 2.05
GGCX-206ENST00000465637 ABCC9O60706 1549 aa26.85■■□□□ 1.89
GGCX-206ENST00000465637 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
GGCX-206ENST00000465637 ZCCHC6Q5VYS8 1495 aaKnown RBP26.43■■□□□ 1.82
GGCX-206ENST00000465637 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
GGCX-206ENST00000465637 MYO15BQ96JP2 1530 aa26.2■■□□□ 1.79
GGCX-206ENST00000465637 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
GGCX-206ENST00000465637 NACADO15069 1562 aa26.16■■□□□ 1.78
GGCX-206ENST00000465637 RB1CC1Q8TDY2 1594 aa26.04■■□□□ 1.76
GGCX-206ENST00000465637 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.66
GGCX-206ENST00000465637 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
GGCX-206ENST00000465637 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
GGCX-206ENST00000465637 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.63
GGCX-206ENST00000465637 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
GGCX-206ENST00000465637 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
GGCX-206ENST00000465637 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
GGCX-206ENST00000465637 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
GGCX-206ENST00000465637 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
GGCX-206ENST00000465637 MROH2BQ7Z745 1585 aa24.39■■□□□ 1.5
GGCX-206ENST00000465637 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
GGCX-206ENST00000465637 CC2D2AQ9P2K1 1620 aa24.32■■□□□ 1.48
GGCX-206ENST00000465637 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
GGCX-206ENST00000465637 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
GGCX-206ENST00000465637 ATAD2BQ9ULI0 1458 aa24.22■■□□□ 1.47
GGCX-206ENST00000465637 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
GGCX-206ENST00000465637 NCAPD3P42695 1498 aa24.18■■□□□ 1.46
GGCX-206ENST00000465637 SMARCA2P51531 1590 aa24.17■■□□□ 1.46
GGCX-206ENST00000465637 WIZO95785 1651 aa24.12■■□□□ 1.45
GGCX-206ENST00000465637 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
GGCX-206ENST00000465637 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
GGCX-206ENST00000465637 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
GGCX-206ENST00000465637 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
GGCX-206ENST00000465637 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
GGCX-206ENST00000465637 CCDC88BA6NC98 1476 aa23.66■■□□□ 1.38
GGCX-206ENST00000465637 CADPSQ9ULU8 1353 aa23.48■■□□□ 1.35
GGCX-206ENST00000465637 CFTRP13569 1480 aa23.43■■□□□ 1.34
GGCX-206ENST00000465637 LAMC3Q9Y6N6 1575 aa23.4■■□□□ 1.34
GGCX-206ENST00000465637 NESP48681 1621 aa23.4■■□□□ 1.34
GGCX-206ENST00000465637 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
GGCX-206ENST00000465637 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
GGCX-206ENST00000465637 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
GGCX-206ENST00000465637 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
GGCX-206ENST00000465637 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
GGCX-206ENST00000465637 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
GGCX-206ENST00000465637 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
GGCX-206ENST00000465637 THOC2Q8NI27 1593 aaKnown RBP22.93■■□□□ 1.26
GGCX-206ENST00000465637 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
GGCX-206ENST00000465637 ABCC8Q09428 1581 aa22.89■■□□□ 1.26
GGCX-206ENST00000465637 WDR62O43379 1518 aa22.87■■□□□ 1.25
GGCX-206ENST00000465637 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
GGCX-206ENST00000465637 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
GGCX-206ENST00000465637 CUX1P39880 1505 aa22.84■■□□□ 1.25
GGCX-206ENST00000465637 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
GGCX-206ENST00000465637 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
GGCX-206ENST00000465637 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
GGCX-206ENST00000465637 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
GGCX-206ENST00000465637 CUX2O14529 1486 aa22.73■■□□□ 1.23
GGCX-206ENST00000465637 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
GGCX-206ENST00000465637 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
GGCX-206ENST00000465637 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
GGCX-206ENST00000465637 SOGA1O94964 1423 aa22.62■■□□□ 1.21
GGCX-206ENST00000465637 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
GGCX-206ENST00000465637 TARBP1Q13395 1621 aaKnown RBP22.58■■□□□ 1.21
GGCX-206ENST00000465637 RAD54L2Q9Y4B4 1467 aa22.58■■□□□ 1.2
GGCX-206ENST00000465637 FOXD1Q16676 465 aa22.53■■□□□ 1.2
GGCX-206ENST00000465637 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
GGCX-206ENST00000465637 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
GGCX-206ENST00000465637 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
GGCX-206ENST00000465637 TDRD9Q8NDG6 1382 aaKnown RBP22.43■■□□□ 1.18
GGCX-206ENST00000465637 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.183e-9■■■■■ 34.1
GGCX-206ENST00000465637 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
GGCX-206ENST00000465637 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
GGCX-206ENST00000465637 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
GGCX-206ENST00000465637 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
GGCX-206ENST00000465637 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
GGCX-206ENST00000465637 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
GGCX-206ENST00000465637 IGF1RP08069 1367 aa22.28■■□□□ 1.16
GGCX-206ENST00000465637 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
GGCX-206ENST00000465637 EEA1Q15075 1411 aa22.23■■□□□ 1.15
GGCX-206ENST00000465637 PBRM1Q86U86 1689 aa22.2■■□□□ 1.15
GGCX-206ENST00000465637 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
GGCX-206ENST00000465637 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
GGCX-206ENST00000465637 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
GGCX-206ENST00000465637 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
GGCX-206ENST00000465637 CARMIL1Q5VZK9 1371 aa22.11■■□□□ 1.13
GGCX-206ENST00000465637 FAM9AQ8IZU1 332 aaPredicted RBP22.1■■□□□ 1.13
GGCX-206ENST00000465637 CUL7Q14999 1698 aa22.08■■□□□ 1.13
GGCX-206ENST00000465637 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
GGCX-206ENST00000465637 PRXQ9BXM0 1461 aa22.08■■□□□ 1.12
GGCX-206ENST00000465637 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
GGCX-206ENST00000465637 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
GGCX-206ENST00000465637 RAPGEF2Q9Y4G8 1499 aa22■■□□□ 1.11
GGCX-206ENST00000465637 FBLN2P98095 1184 aa21.99■■□□□ 1.11
GGCX-206ENST00000465637 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
GGCX-206ENST00000465637 CHD1O14646 1710 aa21.96■■□□□ 1.11
GGCX-206ENST00000465637 KIF21BO75037 1637 aa21.93■■□□□ 1.1
GGCX-206ENST00000465637 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
GGCX-206ENST00000465637 NUP160Q12769 1436 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms