RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 NISCHQ9Y2I1 1504 aa46.99■■■■■ 5.11
SEC22A-208ENST00000487572 CCDC180Q9P1Z9 1646 aa41.62■■■■■ 4.25
SEC22A-208ENST00000487572 ABCC9O60706 1549 aa40.6■■■■■ 4.09
SEC22A-208ENST00000487572 DCAF8L2P0C7V8 631 aa39.29■■■■□ 3.88
SEC22A-208ENST00000487572 ZCCHC6Q5VYS8 1495 aaKnown RBP39.2■■■■□ 3.87
SEC22A-208ENST00000487572 RB1CC1Q8TDY2 1594 aa39.09■■■■□ 3.85
SEC22A-208ENST00000487572 NACADO15069 1562 aa39.08■■■■□ 3.85
SEC22A-208ENST00000487572 MYO15BQ96JP2 1530 aa38.87■■■■□ 3.81
SEC22A-208ENST00000487572 DCAF1Q9Y4B6 1507 aa38.83■■■■□ 3.81
SEC22A-208ENST00000487572 UNC13AQ9UPW8 1703 aa38.19■■■■□ 3.7
SEC22A-208ENST00000487572 SCRIBQ14160 1630 aa38.11■■■■□ 3.69
SEC22A-208ENST00000487572 PABPN1Q86U42 306 aaKnown RBP eCLIP38■■■■□ 3.67
SEC22A-208ENST00000487572 BICRAQ9NZM4 1560 aa37.89■■■■□ 3.66
SEC22A-208ENST00000487572 SHROOM4Q9ULL8 1493 aa37.45■■■■□ 3.59
SEC22A-208ENST00000487572 DNAJC5BQ9UF47 199 aa37■■■■□ 3.51
SEC22A-208ENST00000487572 EIF4G1Q04637 1599 aaKnown RBP36.89■■■■□ 3.5
SEC22A-208ENST00000487572 CC2D2AQ9P2K1 1620 aa36.69■■■■□ 3.46
SEC22A-208ENST00000487572 CECR2Q9BXF3 1484 aa36.62■■■■□ 3.45
SEC22A-208ENST00000487572 SMARCA4P51532 1647 aa36.42■■■■□ 3.42
SEC22A-208ENST00000487572 BAZ1AQ9NRL2 1556 aaPredicted RBP36.4■■■■□ 3.42
SEC22A-208ENST00000487572 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
SEC22A-208ENST00000487572 ATAD2BQ9ULI0 1458 aa36.15■■■■□ 3.38
SEC22A-208ENST00000487572 SMARCA2P51531 1590 aa36.11■■■■□ 3.37
SEC22A-208ENST00000487572 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
SEC22A-208ENST00000487572 PEG3Q9GZU2 1588 aa36■■■■□ 3.35
SEC22A-208ENST00000487572 HMGXB3Q12766 1538 aa35.92■■■■□ 3.34
SEC22A-208ENST00000487572 RSF1Q96T23 1441 aaPredicted RBP35.91■■■■□ 3.34
SEC22A-208ENST00000487572 BAZ1BQ9UIG0 1483 aaKnown RBP35.9■■■■□ 3.34
SEC22A-208ENST00000487572 WIZO95785 1651 aa35.88■■■■□ 3.33
SEC22A-208ENST00000487572 TOP2AP11388 1531 aaKnown RBP35.49■■■■□ 3.27
SEC22A-208ENST00000487572 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
SEC22A-208ENST00000487572 NESP48681 1621 aa35.2■■■■□ 3.23
SEC22A-208ENST00000487572 CCDC88BA6NC98 1476 aa35.09■■■■□ 3.21
SEC22A-208ENST00000487572 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
SEC22A-208ENST00000487572 CADPSQ9ULU8 1353 aa35.05■■■■□ 3.2
SEC22A-208ENST00000487572 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
SEC22A-208ENST00000487572 CFTRP13569 1480 aa34.89■■■■□ 3.18
SEC22A-208ENST00000487572 PDS5BQ9NTI5 1447 aa34.86■■■■□ 3.17
SEC22A-208ENST00000487572 KIF21AQ7Z4S6 1674 aa34.76■■■■□ 3.16
SEC22A-208ENST00000487572 FANCD2Q9BXW9 1451 aa34.68■■■■□ 3.14
SEC22A-208ENST00000487572 PRDM2Q13029 1718 aa34.62■■■■□ 3.13
SEC22A-208ENST00000487572 CEP164Q9UPV0 1460 aa34.61■■■■□ 3.13
SEC22A-208ENST00000487572 THOC2Q8NI27 1593 aaKnown RBP34.57■■■■□ 3.12
SEC22A-208ENST00000487572 MRC2Q9UBG0 1479 aa34.51■■■■□ 3.11
SEC22A-208ENST00000487572 CUX2O14529 1486 aa34.43■■■■□ 3.1
SEC22A-208ENST00000487572 WDR62O43379 1518 aa34.36■■■■□ 3.09
SEC22A-208ENST00000487572 URB2Q14146 1524 aaKnown RBP34.31■■■■□ 3.08
SEC22A-208ENST00000487572 TOPBP1Q92547 1522 aa34.14■■■■□ 3.06
SEC22A-208ENST00000487572 DNMBPQ6XZF7 1577 aa34.12■■■■□ 3.05
SEC22A-208ENST00000487572 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
SEC22A-208ENST00000487572 CUX1P39880 1505 aa33.99■■■■□ 3.03
SEC22A-208ENST00000487572 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
SEC22A-208ENST00000487572 WRNQ14191 1432 aaPredicted RBP eCLIP33.87■■■■□ 3.01
SEC22A-208ENST00000487572 FGD5Q6ZNL6 1462 aa33.85■■■■□ 3.01
SEC22A-208ENST00000487572 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
SEC22A-208ENST00000487572 SYNJ1O43426 1573 aa33.79■■■■□ 3
SEC22A-208ENST00000487572 RAD54L2Q9Y4B4 1467 aa33.76■■■■□ 3
SEC22A-208ENST00000487572 SOGA1O94964 1423 aa33.75■■■□□ 2.99
SEC22A-208ENST00000487572 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
SEC22A-208ENST00000487572 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
SEC22A-208ENST00000487572 BIVM-ERCC5R4GMW8 1640 aa33.73■■■□□ 2.99
SEC22A-208ENST00000487572 ZNF608Q9ULD9 1512 aaPredicted RBP33.72■■■□□ 2.99
SEC22A-208ENST00000487572 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
SEC22A-208ENST00000487572 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.96
SEC22A-208ENST00000487572 TDRD9Q8NDG6 1382 aaKnown RBP33.56■■■□□ 2.96
SEC22A-208ENST00000487572 WDR97A6NE52 1622 aa33.51■■■□□ 2.96
SEC22A-208ENST00000487572 ABCA10Q8WWZ4 1543 aa33.49■■■□□ 2.95
SEC22A-208ENST00000487572 GAPVD1Q14C86 1478 aa33.36■■■□□ 2.93
SEC22A-208ENST00000487572 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
SEC22A-208ENST00000487572 GRIN2BQ13224 1484 aa33.31■■■□□ 2.92
SEC22A-208ENST00000487572 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
SEC22A-208ENST00000487572 PBRM1Q86U86 1689 aa33.26■■■□□ 2.92
SEC22A-208ENST00000487572 SNAPC4Q5SXM2 1469 aa33.26■■■□□ 2.92
SEC22A-208ENST00000487572 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
SEC22A-208ENST00000487572 FBLN2P98095 1184 aa33.17■■■□□ 2.9
SEC22A-208ENST00000487572 KIF27Q86VH2 1401 aa33.14■■■□□ 2.9
SEC22A-208ENST00000487572 CHD1O14646 1710 aa33.11■■■□□ 2.89
SEC22A-208ENST00000487572 ERICH3Q5RHP9 1530 aa33.09■■■□□ 2.89
SEC22A-208ENST00000487572 OSCARQ8IYS5 282 aa33.09■■■□□ 2.89
SEC22A-208ENST00000487572 DNAJC5Q9H3Z4 198 aa33.08■■■□□ 2.89
SEC22A-208ENST00000487572 CHMP7Q8WUX9 453 aaPredicted RBP33.07■■■□□ 2.88
SEC22A-208ENST00000487572 SYNJ2O15056 1496 aa33.06■■■□□ 2.88
SEC22A-208ENST00000487572 CHIC1Q5VXU3 224 aa33.04■■■□□ 2.88
SEC22A-208ENST00000487572 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
SEC22A-208ENST00000487572 FHAD1B1AJZ9 1412 aa32.97■■■□□ 2.87
SEC22A-208ENST00000487572 IGF1RP08069 1367 aa32.96■■■□□ 2.87
SEC22A-208ENST00000487572 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
SEC22A-208ENST00000487572 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
SEC22A-208ENST00000487572 CUL7Q14999 1698 aa32.85■■■□□ 2.85
SEC22A-208ENST00000487572 CARMIL1Q5VZK9 1371 aa32.79■■■□□ 2.84
SEC22A-208ENST00000487572 CLASP1Q7Z460 1538 aa32.73■■■□□ 2.83
SEC22A-208ENST00000487572 CEP170Q5SW79 1584 aa32.72■■■□□ 2.83
SEC22A-208ENST00000487572 NUP160Q12769 1436 aa32.7■■■□□ 2.83
SEC22A-208ENST00000487572 FAM9AQ8IZU1 332 aaPredicted RBP32.67■■■□□ 2.82
SEC22A-208ENST00000487572 EEA1Q15075 1411 aa32.64■■■□□ 2.82
SEC22A-208ENST00000487572 RAPGEF2Q9Y4G8 1499 aa32.61■■■□□ 2.81
SEC22A-208ENST00000487572 CSRNP3Q8WYN3 585 aa32.61■■■□□ 2.81
SEC22A-208ENST00000487572 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
SEC22A-208ENST00000487572 PRXQ9BXM0 1461 aa32.54■■■□□ 2.8
SEC22A-208ENST00000487572 RIMBP3CA6NJZ7 1639 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms