RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 NISCHQ9Y2I1 1504 aa33.43■■■□□ 2.94
DKC1-201ENST00000369550 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
DKC1-201ENST00000369550 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
DKC1-201ENST00000369550 HRCP23327 699 aa28.42■■■□□ 2.14
DKC1-201ENST00000369550 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
DKC1-201ENST00000369550 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
DKC1-201ENST00000369550 PCGF6Q9BYE7 350 aa27.97■■■□□ 2.07
DKC1-201ENST00000369550 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
DKC1-201ENST00000369550 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
DKC1-201ENST00000369550 PPARGC1BQ86YN6 1023 aaKnown RBP27.81■■■□□ 2.04
DKC1-201ENST00000369550 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
DKC1-201ENST00000369550 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
DKC1-201ENST00000369550 PELP1Q8IZL8 1130 aaKnown RBP27.19■■□□□ 1.94
DKC1-201ENST00000369550 LOC105371045A0A1W2PR82 267 aa27.17■■□□□ 1.94
DKC1-201ENST00000369550 TRIM26Q12899 539 aaPredicted RBP27.12■■□□□ 1.93
DKC1-201ENST00000369550 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
DKC1-201ENST00000369550 ABCC9O60706 1549 aa26.8■■□□□ 1.88
DKC1-201ENST00000369550 SCAF1Q9H7N4 1312 aaKnown RBP26.75■■□□□ 1.87
DKC1-201ENST00000369550 NACADO15069 1562 aa26.72■■□□□ 1.87
DKC1-201ENST00000369550 SCRIBQ14160 1630 aa26.67■■□□□ 1.86
DKC1-201ENST00000369550 RB1CC1Q8TDY2 1594 aa26.36■■□□□ 1.81
DKC1-201ENST00000369550 TRIM41Q8WV44 630 aa26.31■■□□□ 1.8
DKC1-201ENST00000369550 FAM9AQ8IZU1 332 aaPredicted RBP26.27■■□□□ 1.8
DKC1-201ENST00000369550 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.78
DKC1-201ENST00000369550 RSF1Q96T23 1441 aaPredicted RBP26.19■■□□□ 1.78
DKC1-201ENST00000369550 EHMT2Q96KQ7 1210 aa26.15■■□□□ 1.78
DKC1-201ENST00000369550 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
DKC1-201ENST00000369550 MYT1Q01538 1121 aa26.09■■□□□ 1.77
DKC1-201ENST00000369550 GTF3C3Q9Y5Q9 886 aa25.99■■□□□ 1.75
DKC1-201ENST00000369550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.99■■□□□ 1.75
DKC1-201ENST00000369550 CENPBP07199 599 aaPredicted RBP25.99■■□□□ 1.75
DKC1-201ENST00000369550 CCER1Q8TC90 406 aaPredicted RBP25.99■■□□□ 1.75
DKC1-201ENST00000369550 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
DKC1-201ENST00000369550 DIEXFQ68CQ4 756 aaKnown RBP25.9■■□□□ 1.74
DKC1-201ENST00000369550 UNC13AQ9UPW8 1703 aa25.89■■□□□ 1.74
DKC1-201ENST00000369550 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
DKC1-201ENST00000369550 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
DKC1-201ENST00000369550 WIZO95785 1651 aa25.71■■□□□ 1.71
DKC1-201ENST00000369550 BICRAQ9NZM4 1560 aa25.58■■□□□ 1.69
DKC1-201ENST00000369550 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
DKC1-201ENST00000369550 TTBK1Q5TCY1 1321 aaPredicted RBP25.51■■□□□ 1.67
DKC1-201ENST00000369550 YTHDC1Q96MU7 727 aaKnown RBP25.48■■□□□ 1.67
DKC1-201ENST00000369550 ZNF316A6NFI3 1004 aaPredicted RBP25.43■■□□□ 1.66
DKC1-201ENST00000369550 PABPN1Q86U42 306 aaKnown RBP eCLIP25.43■■□□□ 1.66
DKC1-201ENST00000369550 TOP2AP11388 1531 aaKnown RBP25.42■■□□□ 1.66
DKC1-201ENST00000369550 WRNQ14191 1432 aaPredicted RBP eCLIP25.27■■□□□ 1.64
DKC1-201ENST00000369550 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
DKC1-201ENST00000369550 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
DKC1-201ENST00000369550 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
DKC1-201ENST00000369550 MIER1Q8N108 512 aa25.21■■□□□ 1.63
DKC1-201ENST00000369550 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
DKC1-201ENST00000369550 CEP162Q5TB80 1403 aa25.19■■□□□ 1.62
DKC1-201ENST00000369550 TNIKQ9UKE5 1360 aa25.02■■□□□ 1.6
DKC1-201ENST00000369550 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
DKC1-201ENST00000369550 UBTFP17480 764 aaKnown RBP25■■□□□ 1.59
DKC1-201ENST00000369550 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
DKC1-201ENST00000369550 HNRNPUL2Q1KMD3 747 aaKnown RBP24.96■■□□□ 1.59
DKC1-201ENST00000369550 SOGA1O94964 1423 aa24.92■■□□□ 1.58
DKC1-201ENST00000369550 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
DKC1-201ENST00000369550 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
DKC1-201ENST00000369550 EEA1Q15075 1411 aa24.8■■□□□ 1.56
DKC1-201ENST00000369550 CLSPNQ9HAW4 1339 aa24.79■■□□□ 1.56
DKC1-201ENST00000369550 SUPT16HQ9Y5B9 1047 aaKnown RBP24.77■■□□□ 1.56
DKC1-201ENST00000369550 GOLGA3Q08378 1498 aa24.75■■□□□ 1.55
DKC1-201ENST00000369550 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
DKC1-201ENST00000369550 HMGXB3Q12766 1538 aa24.69■■□□□ 1.54
DKC1-201ENST00000369550 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
DKC1-201ENST00000369550 APLP2Q06481 763 aa24.64■■□□□ 1.54
DKC1-201ENST00000369550 TSHZ2Q9NRE2 1034 aa24.59■■□□□ 1.53
DKC1-201ENST00000369550 ANP32EQ9BTT0 268 aa24.58■■□□□ 1.53
DKC1-201ENST00000369550 CLIP1P30622 1438 aa24.56■■□□□ 1.52
DKC1-201ENST00000369550 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
DKC1-201ENST00000369550 VPS8Q8N3P4 1428 aa24.51■■□□□ 1.51
DKC1-201ENST00000369550 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
DKC1-201ENST00000369550 RANGAP1P46060 587 aaPredicted RBP24.44■■□□□ 1.5
DKC1-201ENST00000369550 DHX57Q6P158 1386 aaKnown RBP24.41■■□□□ 1.5
DKC1-201ENST00000369550 KIF21BO75037 1637 aa24.38■■□□□ 1.49
DKC1-201ENST00000369550 BCL11AQ9H165 835 aa24.38■■□□□ 1.49
DKC1-201ENST00000369550 TOP2BQ02880 1626 aa24.35■■□□□ 1.49
DKC1-201ENST00000369550 BCANQ96GW7 911 aa24.31■■□□□ 1.48
DKC1-201ENST00000369550 CFTRP13569 1480 aa24.31■■□□□ 1.48
DKC1-201ENST00000369550 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
DKC1-201ENST00000369550 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
DKC1-201ENST00000369550 RAPGEF2Q9Y4G8 1499 aa24.25■■□□□ 1.47
DKC1-201ENST00000369550 KCNH8Q96L42 1107 aa24.22■■□□□ 1.47
DKC1-201ENST00000369550 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
DKC1-201ENST00000369550 FKBP8Q14318 412 aa24.2■■□□□ 1.46
DKC1-201ENST00000369550 CUX1P39880 1505 aa24.16■■□□□ 1.46
DKC1-201ENST00000369550 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
DKC1-201ENST00000369550 CADPSQ9ULU8 1353 aa24.1■■□□□ 1.45
DKC1-201ENST00000369550 NEFLP07196 543 aa24.08■■□□□ 1.45
DKC1-201ENST00000369550 RBM19Q9Y4C8 960 aaKnown RBP24.06■■□□□ 1.44
DKC1-201ENST00000369550 ITGAEP38570 1179 aa24.04■■□□□ 1.44
DKC1-201ENST00000369550 RRBP1Q9P2E9 1410 aaKnown RBP24.01■■□□□ 1.43
DKC1-201ENST00000369550 DDX10Q13206 875 aaKnown RBP23.99■■□□□ 1.43
DKC1-201ENST00000369550 ARAP1Q96P48 1450 aa23.98■■□□□ 1.43
DKC1-201ENST00000369550 CCNB3Q8WWL7 1395 aa23.96■■□□□ 1.43
DKC1-201ENST00000369550 CUX2O14529 1486 aa23.96■■□□□ 1.43
DKC1-201ENST00000369550 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.42
DKC1-201ENST00000369550 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms