RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 NISCHQ9Y2I1 1504 aa11.19□□□□□ -0.62
HNRNPU-208ENST00000475997 DCAF8L2P0C7V8 631 aa10.23□□□□□ -0.77
HNRNPU-208ENST00000475997 SHROOM4Q9ULL8 1493 aa10.19□□□□□ -0.78
HNRNPU-208ENST00000475997 SUPT5HO00267 1087 aaKnown RBP10.18□□□□□ -0.78
HNRNPU-208ENST00000475997 PELP1Q8IZL8 1130 aaKnown RBP10.07□□□□□ -0.8
HNRNPU-208ENST00000475997 MYT1Q01538 1121 aa9.89□□□□□ -0.83
HNRNPU-208ENST00000475997 PCGF6Q9BYE7 350 aa9.65□□□□□ -0.86
HNRNPU-208ENST00000475997 CHIC1Q5VXU3 224 aa9.58□□□□□ -0.88
HNRNPU-208ENST00000475997 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
HNRNPU-208ENST00000475997 EHMT2Q96KQ7 1210 aa9.56□□□□□ -0.88
HNRNPU-208ENST00000475997 ERICH6Q7L0X2 663 aa9.55□□□□□ -0.88
HNRNPU-208ENST00000475997 FAM9AQ8IZU1 332 aaPredicted RBP9.49□□□□□ -0.89
HNRNPU-208ENST00000475997 CENPBP07199 599 aaPredicted RBP9.47□□□□□ -0.89
HNRNPU-208ENST00000475997 HRCP23327 699 aa9.46□□□□□ -0.9
HNRNPU-208ENST00000475997 LOC105371045A0A1W2PR82 267 aa9.45□□□□□ -0.9
HNRNPU-208ENST00000475997 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
HNRNPU-208ENST00000475997 ZCCHC6Q5VYS8 1495 aaKnown RBP9.38□□□□□ -0.91
HNRNPU-208ENST00000475997 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
HNRNPU-208ENST00000475997 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
HNRNPU-208ENST00000475997 ZEB1P37275 1124 aaPredicted RBP9.27□□□□□ -0.93
HNRNPU-208ENST00000475997 MYO15BQ96JP2 1530 aa9.24□□□□□ -0.93
HNRNPU-208ENST00000475997 TTBK1Q5TCY1 1321 aaPredicted RBP9.24□□□□□ -0.93
HNRNPU-208ENST00000475997 YTHDC1Q96MU7 727 aaKnown RBP9.23□□□□□ -0.93
HNRNPU-208ENST00000475997 CCDC180Q9P1Z9 1646 aa9.23□□□□□ -0.93
HNRNPU-208ENST00000475997 NEFLP07196 543 aa9.2□□□□□ -0.94
HNRNPU-208ENST00000475997 APLP2Q06481 763 aa9.18□□□□□ -0.94
HNRNPU-208ENST00000475997 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
HNRNPU-208ENST00000475997 ABCC9O60706 1549 aa9.07□□□□□ -0.96
HNRNPU-208ENST00000475997 DCAF1Q9Y4B6 1507 aa9.07□□□□□ -0.96
HNRNPU-208ENST00000475997 RANGAP1P46060 587 aaPredicted RBP9.04□□□□□ -0.96
HNRNPU-208ENST00000475997 SCRIBQ14160 1630 aa9.02□□□□□ -0.96
HNRNPU-208ENST00000475997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.02□□□□□ -0.97
HNRNPU-208ENST00000475997 DAXXQ9UER7 740 aaPredicted RBP9.01□□□□□ -0.97
HNRNPU-208ENST00000475997 RSF1Q96T23 1441 aaPredicted RBP8.97□□□□□ -0.97
HNRNPU-208ENST00000475997 RTL5Q5HYW3 569 aaPredicted RBP8.93□□□□□ -0.98
HNRNPU-208ENST00000475997 HNRNPUL2Q1KMD3 747 aaKnown RBP8.89□□□□□ -0.99
HNRNPU-208ENST00000475997 PABPN1Q86U42 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
HNRNPU-208ENST00000475997 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
HNRNPU-208ENST00000475997 CSRNP3Q8WYN3 585 aa8.82□□□□□ -1
HNRNPU-208ENST00000475997 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
HNRNPU-208ENST00000475997 RB1CC1Q8TDY2 1594 aa8.8□□□□□ -1
HNRNPU-208ENST00000475997 ATP1B4Q9UN42 357 aaPredicted RBP8.76□□□□□ -1.01
HNRNPU-208ENST00000475997 ZNF316A6NFI3 1004 aaPredicted RBP8.75□□□□□ -1.01
HNRNPU-208ENST00000475997 ITGAEP38570 1179 aa8.75□□□□□ -1.01
HNRNPU-208ENST00000475997 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
HNRNPU-208ENST00000475997 ACIN1Q9UKV3 1341 aaKnown RBP8.74□□□□□ -1.01
HNRNPU-208ENST00000475997 SCAF1Q9H7N4 1312 aaKnown RBP8.74□□□□□ -1.01
HNRNPU-208ENST00000475997 NACADO15069 1562 aa8.73□□□□□ -1.01
HNRNPU-208ENST00000475997 MROH2BQ7Z745 1585 aa8.73□□□□□ -1.01
HNRNPU-208ENST00000475997 GLIPR1L2Q4G1C9 344 aa8.71□□□□□ -1.01
HNRNPU-208ENST00000475997 NEUROD1Q13562 356 aa8.69□□□□□ -1.02
HNRNPU-208ENST00000475997 CEP162Q5TB80 1403 aa8.67□□□□□ -1.02
HNRNPU-208ENST00000475997 WIZO95785 1651 aa8.65□□□□□ -1.03
HNRNPU-208ENST00000475997 BAZ1AQ9NRL2 1556 aaPredicted RBP8.64□□□□□ -1.03
HNRNPU-208ENST00000475997 SOGA1O94964 1423 aa8.63□□□□□ -1.03
HNRNPU-208ENST00000475997 TNIKQ9UKE5 1360 aa8.62□□□□□ -1.03
HNRNPU-208ENST00000475997 MYT1LQ9UL68 1186 aa8.61□□□□□ -1.03
HNRNPU-208ENST00000475997 ABCC8Q09428 1581 aa8.61□□□□□ -1.03
HNRNPU-208ENST00000475997 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
HNRNPU-208ENST00000475997 CLSPNQ9HAW4 1339 aa8.61□□□□□ -1.03
HNRNPU-208ENST00000475997 EEA1Q15075 1411 aa8.58□□□□□ -1.04
HNRNPU-208ENST00000475997 CLIP1P30622 1438 aa8.58□□□□□ -1.04
HNRNPU-208ENST00000475997 WRNQ14191 1432 aaPredicted RBP eCLIP8.58□□□□□ -1.04
HNRNPU-208ENST00000475997 MIER1Q8N108 512 aa8.57□□□□□ -1.04
HNRNPU-208ENST00000475997 GOLGA3Q08378 1498 aa8.57□□□□□ -1.04
HNRNPU-208ENST00000475997 EIF5BO60841 1220 aaKnown RBP8.57□□□□□ -1.04
HNRNPU-208ENST00000475997 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
HNRNPU-208ENST00000475997 FAM50AQ14320 339 aaKnown RBP8.56□□□□□ -1.04
HNRNPU-208ENST00000475997 P3H3Q8IVL6 736 aa8.52□□□□□ -1.05
HNRNPU-208ENST00000475997 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
HNRNPU-208ENST00000475997 CEP164Q9UPV0 1460 aa8.5□□□□□ -1.05
HNRNPU-208ENST00000475997 TOP2AP11388 1531 aaKnown RBP8.5□□□□□ -1.05
HNRNPU-208ENST00000475997 ANP32AP39687 249 aaKnown RBP8.47□□□□□ -1.05
HNRNPU-208ENST00000475997 ANP32BQ92688 251 aaKnown RBP8.47□□□□□ -1.05
HNRNPU-208ENST00000475997 BAZ1BQ9UIG0 1483 aaKnown RBP8.47□□□□□ -1.05
HNRNPU-208ENST00000475997 BCANQ96GW7 911 aa8.45□□□□□ -1.06
HNRNPU-208ENST00000475997 SMARCA4P51532 1647 aa8.45□□□□□ -1.06
HNRNPU-208ENST00000475997 POLR3GLQ9BT43 218 aa8.44□□□□□ -1.06
HNRNPU-208ENST00000475997 VPS8Q8N3P4 1428 aa8.42□□□□□ -1.06
HNRNPU-208ENST00000475997 SMARCA2P51531 1590 aa8.42□□□□□ -1.06
HNRNPU-208ENST00000475997 DDX10Q13206 875 aaKnown RBP8.41□□□□□ -1.06
HNRNPU-208ENST00000475997 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
HNRNPU-208ENST00000475997 ZBTB47Q9UFB7 747 aaPredicted RBP8.4□□□□□ -1.07
HNRNPU-208ENST00000475997 CNGB1Q14028 1251 aaPredicted RBP8.38□□□□□ -1.07
HNRNPU-208ENST00000475997 ANP32CO43423 234 aa8.38□□□□□ -1.07
HNRNPU-208ENST00000475997 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
HNRNPU-208ENST00000475997 HIRIP3Q9BW71 556 aaPredicted RBP8.38□□□□□ -1.07
HNRNPU-208ENST00000475997 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
HNRNPU-208ENST00000475997 KIF27Q86VH2 1401 aa8.37□□□□□ -1.07
HNRNPU-208ENST00000475997 ATAD2BQ9ULI0 1458 aa8.34□□□□□ -1.07
HNRNPU-208ENST00000475997 ARID3CA6NKF2 412 aa8.34□□□□□ -1.07
HNRNPU-208ENST00000475997 TNNT2P45379 298 aaPredicted RBP8.34□□□□□ -1.07
HNRNPU-208ENST00000475997 FKBP8Q14318 412 aa8.33□□□□□ -1.08
HNRNPU-208ENST00000475997 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
HNRNPU-208ENST00000475997 CCNB3Q8WWL7 1395 aa8.33□□□□□ -1.08
HNRNPU-208ENST00000475997 TONSLQ96HA7 1378 aa8.31□□□□□ -1.08
HNRNPU-208ENST00000475997 CHIC2Q9UKJ5 165 aa8.29□□□□□ -1.08
HNRNPU-208ENST00000475997 DHX57Q6P158 1386 aaKnown RBP8.28□□□□□ -1.08
HNRNPU-208ENST00000475997 CUX2O14529 1486 aa8.28□□□□□ -1.08
HNRNPU-208ENST00000475997 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms