RNA–Protein interactions for RNA: ENST00000534877.5

COPS7A-203, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-203ENST00000534877 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
COPS7A-203ENST00000534877 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
COPS7A-203ENST00000534877 ABCC9O60706 1549 aa23.2■■□□□ 1.31
COPS7A-203ENST00000534877 ZCCHC6Q5VYS8 1495 aaKnown RBP23.08■■□□□ 1.29
COPS7A-203ENST00000534877 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
COPS7A-203ENST00000534877 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.21
COPS7A-203ENST00000534877 MYO15BQ96JP2 1530 aa22.6■■□□□ 1.21
COPS7A-203ENST00000534877 NACADO15069 1562 aa22.52■■□□□ 1.2
COPS7A-203ENST00000534877 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
COPS7A-203ENST00000534877 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
COPS7A-203ENST00000534877 SCRIBQ14160 1630 aa22.14■■□□□ 1.14
COPS7A-203ENST00000534877 UNC13AQ9UPW8 1703 aa22.05■■□□□ 1.12
COPS7A-203ENST00000534877 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
COPS7A-203ENST00000534877 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.07
COPS7A-203ENST00000534877 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
COPS7A-203ENST00000534877 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
COPS7A-203ENST00000534877 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
COPS7A-203ENST00000534877 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
COPS7A-203ENST00000534877 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
COPS7A-203ENST00000534877 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
COPS7A-203ENST00000534877 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
COPS7A-203ENST00000534877 EIF4G1Q04637 1599 aaKnown RBP21.12■□□□□ 0.97
COPS7A-203ENST00000534877 WIZO95785 1651 aa21.09■□□□□ 0.97
COPS7A-203ENST00000534877 PEG3Q9GZU2 1588 aa21■□□□□ 0.95
COPS7A-203ENST00000534877 CC2D2AQ9P2K1 1620 aa20.98■□□□□ 0.95
COPS7A-203ENST00000534877 ATAD2BQ9ULI0 1458 aa20.91■□□□□ 0.94
COPS7A-203ENST00000534877 SMARCA2P51531 1590 aa20.89■□□□□ 0.94
COPS7A-203ENST00000534877 TOP2AP11388 1531 aaKnown RBP20.84■□□□□ 0.93
COPS7A-203ENST00000534877 NCAPD3P42695 1498 aa20.77■□□□□ 0.92
COPS7A-203ENST00000534877 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
COPS7A-203ENST00000534877 HMGXB3Q12766 1538 aa20.75■□□□□ 0.91
COPS7A-203ENST00000534877 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
COPS7A-203ENST00000534877 CFTRP13569 1480 aa20.24■□□□□ 0.83
COPS7A-203ENST00000534877 PRDM2Q13029 1718 aa20.24■□□□□ 0.83
COPS7A-203ENST00000534877 NESP48681 1621 aa20.2■□□□□ 0.82
COPS7A-203ENST00000534877 CADPSQ9ULU8 1353 aa20.19■□□□□ 0.82
COPS7A-203ENST00000534877 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
COPS7A-203ENST00000534877 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
COPS7A-203ENST00000534877 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
COPS7A-203ENST00000534877 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
COPS7A-203ENST00000534877 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
COPS7A-203ENST00000534877 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
COPS7A-203ENST00000534877 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
COPS7A-203ENST00000534877 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
COPS7A-203ENST00000534877 PDS5BQ9NTI5 1447 aa19.91■□□□□ 0.78
COPS7A-203ENST00000534877 TRIM41Q8WV44 630 aa19.91■□□□□ 0.78
COPS7A-203ENST00000534877 CUX1P39880 1505 aa19.9■□□□□ 0.78
COPS7A-203ENST00000534877 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
COPS7A-203ENST00000534877 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
COPS7A-203ENST00000534877 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
COPS7A-203ENST00000534877 DNMBPQ6XZF7 1577 aa19.79■□□□□ 0.76
COPS7A-203ENST00000534877 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
COPS7A-203ENST00000534877 URB2Q14146 1524 aaKnown RBP19.79■□□□□ 0.76
COPS7A-203ENST00000534877 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
COPS7A-203ENST00000534877 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
COPS7A-203ENST00000534877 FGD5Q6ZNL6 1462 aa19.69■□□□□ 0.74
COPS7A-203ENST00000534877 WDR62O43379 1518 aa19.66■□□□□ 0.74
COPS7A-203ENST00000534877 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
COPS7A-203ENST00000534877 SOGA1O94964 1423 aa19.64■□□□□ 0.73
COPS7A-203ENST00000534877 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
COPS7A-203ENST00000534877 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
COPS7A-203ENST00000534877 RAD54L2Q9Y4B4 1467 aa19.56■□□□□ 0.72
COPS7A-203ENST00000534877 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
COPS7A-203ENST00000534877 TARBP1Q13395 1621 aaKnown RBP19.53■□□□□ 0.72
COPS7A-203ENST00000534877 EEA1Q15075 1411 aa19.53■□□□□ 0.72
COPS7A-203ENST00000534877 CUX2O14529 1486 aa19.53■□□□□ 0.72
COPS7A-203ENST00000534877 ABCA10Q8WWZ4 1543 aa19.52■□□□□ 0.72
COPS7A-203ENST00000534877 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
COPS7A-203ENST00000534877 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
COPS7A-203ENST00000534877 IFT140Q96RY7 1462 aa19.42■□□□□ 0.7
COPS7A-203ENST00000534877 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
COPS7A-203ENST00000534877 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
COPS7A-203ENST00000534877 TDRD9Q8NDG6 1382 aaKnown RBP19.36■□□□□ 0.69
COPS7A-203ENST00000534877 KIF21BO75037 1637 aa19.36■□□□□ 0.69
COPS7A-203ENST00000534877 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
COPS7A-203ENST00000534877 IGF1RP08069 1367 aa19.33■□□□□ 0.69
COPS7A-203ENST00000534877 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.69
COPS7A-203ENST00000534877 PBRM1Q86U86 1689 aa19.33■□□□□ 0.68
COPS7A-203ENST00000534877 PRXQ9BXM0 1461 aa19.32■□□□□ 0.68
COPS7A-203ENST00000534877 EIF4G3O43432 1585 aaKnown RBP19.31■□□□□ 0.68
COPS7A-203ENST00000534877 AQRO60306 1485 aaKnown RBP eCLIP19.3■□□□□ 0.68
COPS7A-203ENST00000534877 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
COPS7A-203ENST00000534877 CUL7Q14999 1698 aa19.26■□□□□ 0.67
COPS7A-203ENST00000534877 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
COPS7A-203ENST00000534877 GOLGA3Q08378 1498 aa19.26■□□□□ 0.67
COPS7A-203ENST00000534877 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
COPS7A-203ENST00000534877 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
COPS7A-203ENST00000534877 CARMIL1Q5VZK9 1371 aa19.22■□□□□ 0.67
COPS7A-203ENST00000534877 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
COPS7A-203ENST00000534877 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
COPS7A-203ENST00000534877 DNAJC5Q9H3Z4 198 aa19.14■□□□□ 0.65
COPS7A-203ENST00000534877 TNIKQ9UKE5 1360 aa19.14■□□□□ 0.65
COPS7A-203ENST00000534877 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
COPS7A-203ENST00000534877 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
COPS7A-203ENST00000534877 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
COPS7A-203ENST00000534877 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
COPS7A-203ENST00000534877 CHD1O14646 1710 aa19.04■□□□□ 0.64
COPS7A-203ENST00000534877 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
COPS7A-203ENST00000534877 SYNJ2O15056 1496 aa19.02■□□□□ 0.64
COPS7A-203ENST00000534877 GRIN2AQ12879 1464 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms