RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 DCAF8L2P0C7V8 631 aa31.2■■■□□ 2.58
SORT1-201ENST00000256637 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
SORT1-201ENST00000256637 SUPT5HO00267 1087 aaKnown RBP28.42■■■□□ 2.14
SORT1-201ENST00000256637 SHROOM4Q9ULL8 1493 aa28.32■■■□□ 2.12
SORT1-201ENST00000256637 TTBK1Q5TCY1 1321 aaPredicted RBP27.51■■□□□ 1.99
SORT1-201ENST00000256637 RANGAP1P46060 587 aaPredicted RBP27.49■■□□□ 1.99
SORT1-201ENST00000256637 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
SORT1-201ENST00000256637 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
SORT1-201ENST00000256637 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
SORT1-201ENST00000256637 APLP2Q06481 763 aa26.98■■□□□ 1.91
SORT1-201ENST00000256637 CHIC1Q5VXU3 224 aa26.51■■□□□ 1.83
SORT1-201ENST00000256637 MYT1LQ9UL68 1186 aa26.5■■□□□ 1.83
SORT1-201ENST00000256637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
SORT1-201ENST00000256637 HNRNPUL2Q1KMD3 747 aaKnown RBP26.12■■□□□ 1.77
SORT1-201ENST00000256637 PCGF6Q9BYE7 350 aa26.11■■□□□ 1.77
SORT1-201ENST00000256637 UBTFP17480 764 aaKnown RBP26.09■■□□□ 1.77
SORT1-201ENST00000256637 PPARGC1BQ86YN6 1023 aaKnown RBP26.02■■□□□ 1.76
SORT1-201ENST00000256637 TRIM41Q8WV44 630 aa25.95■■□□□ 1.75
SORT1-201ENST00000256637 CNGB1Q14028 1251 aaPredicted RBP25.78■■□□□ 1.72
SORT1-201ENST00000256637 POLR3GLQ9BT43 218 aa25.76■■□□□ 1.71
SORT1-201ENST00000256637 ITGAEP38570 1179 aa25.73■■□□□ 1.71
SORT1-201ENST00000256637 PELP1Q8IZL8 1130 aaKnown RBP25.67■■□□□ 1.7
SORT1-201ENST00000256637 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
SORT1-201ENST00000256637 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
SORT1-201ENST00000256637 PABPN1Q86U42 306 aaKnown RBP eCLIP25.58■■□□□ 1.69
SORT1-201ENST00000256637 PLPPR3Q6T4P5 718 aa25.41■■□□□ 1.66
SORT1-201ENST00000256637 FBLN2P98095 1184 aa25.39■■□□□ 1.65
SORT1-201ENST00000256637 YTHDC1Q96MU7 727 aaKnown RBP25.37■■□□□ 1.65
SORT1-201ENST00000256637 ABCC9O60706 1549 aa25.36■■□□□ 1.65
SORT1-201ENST00000256637 ERICH6Q7L0X2 663 aa25.29■■□□□ 1.64
SORT1-201ENST00000256637 BCANQ96GW7 911 aa25.05■■□□□ 1.6
SORT1-201ENST00000256637 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
SORT1-201ENST00000256637 SLC24A1O60721 1099 aa24.95■■□□□ 1.58
SORT1-201ENST00000256637 FAM50AQ14320 339 aaKnown RBP24.81■■□□□ 1.56
SORT1-201ENST00000256637 BCL11AQ9H165 835 aa24.79■■□□□ 1.56
SORT1-201ENST00000256637 NEFLP07196 543 aa24.77■■□□□ 1.56
SORT1-201ENST00000256637 LOC105371045A0A1W2PR82 267 aa24.72■■□□□ 1.55
SORT1-201ENST00000256637 TRIM52Q96A61 297 aa24.72■■□□□ 1.55
SORT1-201ENST00000256637 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
SORT1-201ENST00000256637 CENPBP07199 599 aaPredicted RBP24.64■■□□□ 1.53
SORT1-201ENST00000256637 P3H3Q8IVL6 736 aa24.6■■□□□ 1.53
SORT1-201ENST00000256637 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
SORT1-201ENST00000256637 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
SORT1-201ENST00000256637 MYT1Q01538 1121 aa24.5■■□□□ 1.51
SORT1-201ENST00000256637 PLEKHG5O94827 1062 aa24.45■■□□□ 1.51
SORT1-201ENST00000256637 ZNF777Q9ULD5 760 aaPredicted RBP24.43■■□□□ 1.5
SORT1-201ENST00000256637 DAXXQ9UER7 740 aaPredicted RBP24.41■■□□□ 1.5
SORT1-201ENST00000256637 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
SORT1-201ENST00000256637 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
SORT1-201ENST00000256637 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
SORT1-201ENST00000256637 A0A0G2JS52 829 aa24.28■■□□□ 1.48
SORT1-201ENST00000256637 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
SORT1-201ENST00000256637 CLSPNQ9HAW4 1339 aa24.27■■□□□ 1.48
SORT1-201ENST00000256637 STAG3Q9UJ98 1225 aa24.25■■□□□ 1.47
SORT1-201ENST00000256637 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
SORT1-201ENST00000256637 NPM1P06748 294 aaKnown RBP eCLIP24.08■■□□□ 1.45
SORT1-201ENST00000256637 ZBTB7CA1YPR0 619 aa24.05■■□□□ 1.44
SORT1-201ENST00000256637 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
SORT1-201ENST00000256637 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.421e-7■■■□□ 14.7
SORT1-201ENST00000256637 ZBTB47Q9UFB7 747 aaPredicted RBP23.88■■□□□ 1.41
SORT1-201ENST00000256637 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
SORT1-201ENST00000256637 CANXP27824 592 aaKnown RBP23.84■■□□□ 1.41
SORT1-201ENST00000256637 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
SORT1-201ENST00000256637 ARID4BQ4LE39 1312 aaPredicted RBP23.8■■□□□ 1.4
SORT1-201ENST00000256637 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
SORT1-201ENST00000256637 NEFMP07197 916 aa23.77■■□□□ 1.4
SORT1-201ENST00000256637 KCNH8Q96L42 1107 aa23.72■■□□□ 1.39
SORT1-201ENST00000256637 HRCP23327 699 aa23.68■■□□□ 1.38
SORT1-201ENST00000256637 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
SORT1-201ENST00000256637 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
SORT1-201ENST00000256637 HAP1P54257 671 aaPredicted RBP23.58■■□□□ 1.37
SORT1-201ENST00000256637 SALL2Q9Y467 1007 aaPredicted RBP23.55■■□□□ 1.36
SORT1-201ENST00000256637 KDM2AQ9Y2K7 1162 aa23.5■■□□□ 1.35
SORT1-201ENST00000256637 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
SORT1-201ENST00000256637 ARXQ96QS3 562 aa23.49■■□□□ 1.35
SORT1-201ENST00000256637 ANP32CO43423 234 aa23.46■■□□□ 1.35
SORT1-201ENST00000256637 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
SORT1-201ENST00000256637 PPP1R15AO75807 674 aaPredicted RBP23.41■■□□□ 1.34
SORT1-201ENST00000256637 ERCC6Q03468 1493 aa23.39■■□□□ 1.33
SORT1-201ENST00000256637 LMOD2Q6P5Q4 547 aa23.37■■□□□ 1.33
SORT1-201ENST00000256637 MLECQ14165 292 aa23.33■■□□□ 1.33
SORT1-201ENST00000256637 TULP1O00294 542 aaPredicted RBP23.23■■□□□ 1.31
SORT1-201ENST00000256637 NPM2Q86SE8 214 aaKnown RBP23.2■■□□□ 1.31
SORT1-201ENST00000256637 RTL5Q5HYW3 569 aaPredicted RBP23.2■■□□□ 1.3
SORT1-201ENST00000256637 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
SORT1-201ENST00000256637 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
SORT1-201ENST00000256637 NPHP1O15259 732 aa23.14■■□□□ 1.29
SORT1-201ENST00000256637 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
SORT1-201ENST00000256637 TMC1Q8TDI8 760 aa23.11■■□□□ 1.29
SORT1-201ENST00000256637 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
SORT1-201ENST00000256637 FAM9BQ8IZU0 186 aa23.09■■□□□ 1.29
SORT1-201ENST00000256637 TSPY4P0CV99 314 aa23.08■■□□□ 1.29
SORT1-201ENST00000256637 TSPY10P0CW01 314 aa23.08■■□□□ 1.29
SORT1-201ENST00000256637 HIRIP3Q9BW71 556 aaPredicted RBP23.08■■□□□ 1.28
SORT1-201ENST00000256637 RRP7BPQ9NSQ0 103 aa23.06■■□□□ 1.28
SORT1-201ENST00000256637 TAOK2Q9UL54 1235 aa23.03■■□□□ 1.28
SORT1-201ENST00000256637 SOX12O15370 315 aa23■■□□□ 1.27
SORT1-201ENST00000256637 TONSLQ96HA7 1378 aa22.98■■□□□ 1.27
SORT1-201ENST00000256637 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
SORT1-201ENST00000256637 HSP90AA1P07900 732 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms