RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
TTC3-216ENST00000479930 FAM9AQ8IZU1 332 aaPredicted RBP14.64□□□□□ -0.07
TTC3-216ENST00000479930 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
TTC3-216ENST00000479930 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
TTC3-216ENST00000479930 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
TTC3-216ENST00000479930 ERICH6Q7L0X2 663 aa14.16□□□□□ -0.14
TTC3-216ENST00000479930 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
TTC3-216ENST00000479930 APLP2Q06481 763 aa14.09□□□□□ -0.15
TTC3-216ENST00000479930 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
TTC3-216ENST00000479930 RANGAP1P46060 587 aaPredicted RBP13.9□□□□□ -0.18
TTC3-216ENST00000479930 MYT1Q01538 1121 aa13.86□□□□□ -0.19
TTC3-216ENST00000479930 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
TTC3-216ENST00000479930 SLC4A1APQ9BWU0 796 aaKnown RBP13.8□□□□□ -0.2
TTC3-216ENST00000479930 CCER1Q8TC90 406 aaPredicted RBP13.79□□□□□ -0.2
TTC3-216ENST00000479930 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
TTC3-216ENST00000479930 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
TTC3-216ENST00000479930 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
TTC3-216ENST00000479930 DAXXQ9UER7 740 aaPredicted RBP13.55□□□□□ -0.24
TTC3-216ENST00000479930 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
TTC3-216ENST00000479930 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
TTC3-216ENST00000479930 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.26
TTC3-216ENST00000479930 PLPPR3Q6T4P5 718 aa13.44□□□□□ -0.26
TTC3-216ENST00000479930 BCANQ96GW7 911 aa13.42□□□□□ -0.26
TTC3-216ENST00000479930 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
TTC3-216ENST00000479930 A0A0G2JS52 829 aa13.3□□□□□ -0.28
TTC3-216ENST00000479930 NEFLP07196 543 aa13.28□□□□□ -0.28
TTC3-216ENST00000479930 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
TTC3-216ENST00000479930 CLSPNQ9HAW4 1339 aa13.21□□□□□ -0.29
TTC3-216ENST00000479930 ZBTB47Q9UFB7 747 aaPredicted RBP13.15□□□□□ -0.3
TTC3-216ENST00000479930 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
TTC3-216ENST00000479930 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
TTC3-216ENST00000479930 SHROOM4Q9ULL8 1493 aa13.1□□□□□ -0.31
TTC3-216ENST00000479930 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
TTC3-216ENST00000479930 PCGF6Q9BYE7 350 aa13.08□□□□□ -0.32
TTC3-216ENST00000479930 CDK11BP21127 795 aaKnown RBP13.02□□□□□ -0.32
TTC3-216ENST00000479930 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.32
TTC3-216ENST00000479930 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
TTC3-216ENST00000479930 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
TTC3-216ENST00000479930 ESF1Q9H501 851 aaKnown RBP12.96□□□□□ -0.34
TTC3-216ENST00000479930 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
TTC3-216ENST00000479930 ITGAEP38570 1179 aa12.91□□□□□ -0.34
TTC3-216ENST00000479930 UBTFP17480 764 aaKnown RBP12.9□□□□□ -0.34
TTC3-216ENST00000479930 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
TTC3-216ENST00000479930 CENPBP07199 599 aaPredicted RBP12.83□□□□□ -0.36
TTC3-216ENST00000479930 NEFMP07197 916 aa12.81□□□□□ -0.36
TTC3-216ENST00000479930 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
TTC3-216ENST00000479930 PRM3Q9NNZ6 103 aa12.78□□□□□ -0.36
TTC3-216ENST00000479930 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
TTC3-216ENST00000479930 STAG3Q9UJ98 1225 aa12.74□□□□□ -0.37
TTC3-216ENST00000479930 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
TTC3-216ENST00000479930 FBLN2P98095 1184 aa12.72□□□□□ -0.37
TTC3-216ENST00000479930 CANXP27824 592 aaKnown RBP12.71□□□□□ -0.37
TTC3-216ENST00000479930 NPHP1O15259 732 aa12.71□□□□□ -0.38
TTC3-216ENST00000479930 ARXQ96QS3 562 aa12.69□□□□□ -0.38
TTC3-216ENST00000479930 CLSTN1O94985 981 aa12.64□□□□□ -0.39
TTC3-216ENST00000479930 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
TTC3-216ENST00000479930 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
TTC3-216ENST00000479930 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
TTC3-216ENST00000479930 TRIM52Q96A61 297 aa12.55□□□□□ -0.4
TTC3-216ENST00000479930 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
TTC3-216ENST00000479930 AEBP2Q6ZN18 517 aaPredicted RBP12.54□□□□□ -0.4
TTC3-216ENST00000479930 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
TTC3-216ENST00000479930 FKBP8Q14318 412 aa12.51□□□□□ -0.41
TTC3-216ENST00000479930 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
TTC3-216ENST00000479930 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
TTC3-216ENST00000479930 TRIM41Q8WV44 630 aa12.44□□□□□ -0.42
TTC3-216ENST00000479930 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
TTC3-216ENST00000479930 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
TTC3-216ENST00000479930 PHF23Q9BUL5 403 aaPredicted RBP12.39□□□□□ -0.43
TTC3-216ENST00000479930 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
TTC3-216ENST00000479930 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
TTC3-216ENST00000479930 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
TTC3-216ENST00000479930 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
TTC3-216ENST00000479930 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.44
TTC3-216ENST00000479930 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
TTC3-216ENST00000479930 FAM50AQ14320 339 aaKnown RBP12.32□□□□□ -0.44
TTC3-216ENST00000479930 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
TTC3-216ENST00000479930 ARID4BQ4LE39 1312 aaPredicted RBP12.3□□□□□ -0.44
TTC3-216ENST00000479930 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
TTC3-216ENST00000479930 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.45
TTC3-216ENST00000479930 DIEXFQ68CQ4 756 aaKnown RBP12.22□□□□□ -0.45
TTC3-216ENST00000479930 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.46
TTC3-216ENST00000479930 ZNF777Q9ULD5 760 aaPredicted RBP12.2□□□□□ -0.46
TTC3-216ENST00000479930 TMX4Q9H1E5 349 aaPredicted RBP12.2□□□□□ -0.46
TTC3-216ENST00000479930 NEUROD1Q13562 356 aa12.2□□□□□ -0.46
TTC3-216ENST00000479930 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
TTC3-216ENST00000479930 KLHL34Q8N239 644 aa12.19□□□□□ -0.46
TTC3-216ENST00000479930 CCDC9Q9Y3X0 531 aaKnown RBP12.19□□□□□ -0.46
TTC3-216ENST00000479930 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
TTC3-216ENST00000479930 PDE4CQ08493 712 aa12.18□□□□□ -0.46
TTC3-216ENST00000479930 ZEB1P37275 1124 aaPredicted RBP12.15□□□□□ -0.47
TTC3-216ENST00000479930 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
TTC3-216ENST00000479930 NEUROD2Q15784 382 aa12.13□□□□□ -0.47
TTC3-216ENST00000479930 NBR1Q14596 966 aa12.13□□□□□ -0.47
TTC3-216ENST00000479930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.12□□□□□ -0.476e-8■■□□□ 14.3
TTC3-216ENST00000479930 G3V3G9 751 aa12.12□□□□□ -0.47
TTC3-216ENST00000479930 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
TTC3-216ENST00000479930 TRIM44Q96DX7 344 aaPredicted RBP12.11□□□□□ -0.47
TTC3-216ENST00000479930 ZRSR1Q15695 479 aaKnown RBP12.09□□□□□ -0.47
TTC3-216ENST00000479930 WDR70Q9NW82 654 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms