RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.19
COPS7A-210ENST00000539735 CCDC180Q9P1Z9 1646 aa36.42■■■■□ 3.42
COPS7A-210ENST00000539735 ABCC9O60706 1549 aa35.6■■■■□ 3.29
COPS7A-210ENST00000539735 DCAF8L2P0C7V8 631 aa34.62■■■■□ 3.13
COPS7A-210ENST00000539735 ZCCHC6Q5VYS8 1495 aaKnown RBP34.4■■■■□ 3.1
COPS7A-210ENST00000539735 NACADO15069 1562 aa34.27■■■■□ 3.08
COPS7A-210ENST00000539735 RB1CC1Q8TDY2 1594 aa34.26■■■■□ 3.07
COPS7A-210ENST00000539735 MYO15BQ96JP2 1530 aa34.12■■■■□ 3.05
COPS7A-210ENST00000539735 DCAF1Q9Y4B6 1507 aa34.08■■■■□ 3.05
COPS7A-210ENST00000539735 PABPN1Q86U42 306 aaKnown RBP eCLIP33.4■■■□□ 2.94
COPS7A-210ENST00000539735 SCRIBQ14160 1630 aa33.39■■■□□ 2.94
COPS7A-210ENST00000539735 UNC13AQ9UPW8 1703 aa33.35■■■□□ 2.93
COPS7A-210ENST00000539735 BICRAQ9NZM4 1560 aa33.18■■■□□ 2.9
COPS7A-210ENST00000539735 SHROOM4Q9ULL8 1493 aa33.03■■■□□ 2.88
COPS7A-210ENST00000539735 DNAJC5BQ9UF47 199 aa32.48■■■□□ 2.79
COPS7A-210ENST00000539735 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
COPS7A-210ENST00000539735 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
COPS7A-210ENST00000539735 CC2D2AQ9P2K1 1620 aa32.12■■■□□ 2.73
COPS7A-210ENST00000539735 BAZ1AQ9NRL2 1556 aaPredicted RBP31.95■■■□□ 2.7
COPS7A-210ENST00000539735 SUPT5HO00267 1087 aaKnown RBP31.93■■■□□ 2.7
COPS7A-210ENST00000539735 SMARCA4P51532 1647 aa31.91■■■□□ 2.7
COPS7A-210ENST00000539735 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
COPS7A-210ENST00000539735 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
COPS7A-210ENST00000539735 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
COPS7A-210ENST00000539735 NCAPD3P42695 1498 aa31.67■■■□□ 2.66
COPS7A-210ENST00000539735 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
COPS7A-210ENST00000539735 PEG3Q9GZU2 1588 aa31.56■■■□□ 2.64
COPS7A-210ENST00000539735 BAZ1BQ9UIG0 1483 aaKnown RBP31.51■■■□□ 2.63
COPS7A-210ENST00000539735 HMGXB3Q12766 1538 aa31.48■■■□□ 2.63
COPS7A-210ENST00000539735 WIZO95785 1651 aa31.44■■■□□ 2.62
COPS7A-210ENST00000539735 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
COPS7A-210ENST00000539735 NESP48681 1621 aa30.86■■■□□ 2.53
COPS7A-210ENST00000539735 CCDC88BA6NC98 1476 aa30.83■■■□□ 2.53
COPS7A-210ENST00000539735 CADPSQ9ULU8 1353 aa30.82■■■□□ 2.52
COPS7A-210ENST00000539735 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
COPS7A-210ENST00000539735 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
COPS7A-210ENST00000539735 CHIC1Q5VXU3 224 aa30.66■■■□□ 2.5
COPS7A-210ENST00000539735 CFTRP13569 1480 aa30.64■■■□□ 2.5
COPS7A-210ENST00000539735 PDS5BQ9NTI5 1447 aa30.62■■■□□ 2.49
COPS7A-210ENST00000539735 FANCD2Q9BXW9 1451 aa30.44■■■□□ 2.46
COPS7A-210ENST00000539735 KIF21AQ7Z4S6 1674 aa30.38■■■□□ 2.45
COPS7A-210ENST00000539735 CEP164Q9UPV0 1460 aa30.36■■■□□ 2.45
COPS7A-210ENST00000539735 MRC2Q9UBG0 1479 aa30.24■■■□□ 2.43
COPS7A-210ENST00000539735 PRDM2Q13029 1718 aa30.22■■■□□ 2.43
COPS7A-210ENST00000539735 THOC2Q8NI27 1593 aaKnown RBP30.22■■■□□ 2.43
COPS7A-210ENST00000539735 CUX2O14529 1486 aa30.16■■■□□ 2.42
COPS7A-210ENST00000539735 WDR62O43379 1518 aa30.09■■■□□ 2.41
COPS7A-210ENST00000539735 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
COPS7A-210ENST00000539735 ABCC8Q09428 1581 aa29.96■■■□□ 2.39
COPS7A-210ENST00000539735 TOPBP1Q92547 1522 aa29.95■■■□□ 2.39
COPS7A-210ENST00000539735 TRIM41Q8WV44 630 aa29.93■■■□□ 2.38
COPS7A-210ENST00000539735 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
COPS7A-210ENST00000539735 CUX1P39880 1505 aa29.82■■■□□ 2.36
COPS7A-210ENST00000539735 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
COPS7A-210ENST00000539735 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
COPS7A-210ENST00000539735 IFT140Q96RY7 1462 aa29.71■■■□□ 2.35
COPS7A-210ENST00000539735 FGD5Q6ZNL6 1462 aa29.7■■■□□ 2.34
COPS7A-210ENST00000539735 SOGA1O94964 1423 aa29.67■■■□□ 2.34
COPS7A-210ENST00000539735 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
COPS7A-210ENST00000539735 SYNJ1O43426 1573 aa29.62■■■□□ 2.33
COPS7A-210ENST00000539735 TOP2BQ02880 1626 aa29.6■■■□□ 2.33
COPS7A-210ENST00000539735 ZNF608Q9ULD9 1512 aaPredicted RBP29.58■■■□□ 2.33
COPS7A-210ENST00000539735 LOC105371045A0A1W2PR82 267 aa29.57■■■□□ 2.32
COPS7A-210ENST00000539735 TARBP1Q13395 1621 aaKnown RBP29.55■■■□□ 2.32
COPS7A-210ENST00000539735 BIVM-ERCC5R4GMW8 1640 aa29.54■■■□□ 2.32
COPS7A-210ENST00000539735 TDRD9Q8NDG6 1382 aaKnown RBP29.51■■■□□ 2.31
COPS7A-210ENST00000539735 FAM9AQ8IZU1 332 aaPredicted RBP29.5■■■□□ 2.31
COPS7A-210ENST00000539735 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.31
COPS7A-210ENST00000539735 ABCA10Q8WWZ4 1543 aa29.4■■■□□ 2.3
COPS7A-210ENST00000539735 EIF4G3O43432 1585 aaKnown RBP29.39■■■□□ 2.3
COPS7A-210ENST00000539735 GAPVD1Q14C86 1478 aa29.3■■■□□ 2.28
COPS7A-210ENST00000539735 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
COPS7A-210ENST00000539735 GRIN2BQ13224 1484 aa29.25■■■□□ 2.27
COPS7A-210ENST00000539735 PCGF6Q9BYE7 350 aa29.22■■■□□ 2.27
COPS7A-210ENST00000539735 ABCA5Q8WWZ7 1642 aa29.2■■■□□ 2.27
COPS7A-210ENST00000539735 FBLN2P98095 1184 aa29.2■■■□□ 2.26
COPS7A-210ENST00000539735 HRCP23327 699 aa29.19■■■□□ 2.26
COPS7A-210ENST00000539735 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
COPS7A-210ENST00000539735 EHMT2Q96KQ7 1210 aa29.15■■■□□ 2.26
COPS7A-210ENST00000539735 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
COPS7A-210ENST00000539735 MAGI1Q96QZ7 1491 aaPredicted RBP29.11■■■□□ 2.25
COPS7A-210ENST00000539735 CHMP7Q8WUX9 453 aaPredicted RBP29.11■■■□□ 2.25
COPS7A-210ENST00000539735 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
COPS7A-210ENST00000539735 PBRM1Q86U86 1689 aa29.07■■■□□ 2.24
COPS7A-210ENST00000539735 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
COPS7A-210ENST00000539735 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
COPS7A-210ENST00000539735 SYNJ2O15056 1496 aa29.02■■■□□ 2.24
COPS7A-210ENST00000539735 IGF1RP08069 1367 aa29.02■■■□□ 2.24
COPS7A-210ENST00000539735 RUSC2Q8N2Y8 1516 aa29.01■■■□□ 2.23
COPS7A-210ENST00000539735 EEA1Q15075 1411 aa29■■■□□ 2.23
COPS7A-210ENST00000539735 TRIM26Q12899 539 aaPredicted RBP28.97■■■□□ 2.23
COPS7A-210ENST00000539735 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
COPS7A-210ENST00000539735 CHD1O14646 1710 aa28.92■■■□□ 2.22
COPS7A-210ENST00000539735 ADAMTS12P58397 1594 aa28.92■■■□□ 2.22
COPS7A-210ENST00000539735 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
COPS7A-210ENST00000539735 GRIN2AQ12879 1464 aa28.86■■■□□ 2.21
COPS7A-210ENST00000539735 CARMIL1Q5VZK9 1371 aa28.85■■■□□ 2.21
COPS7A-210ENST00000539735 CUL7Q14999 1698 aa28.78■■■□□ 2.2
COPS7A-210ENST00000539735 NUP160Q12769 1436 aa28.7■■■□□ 2.19
COPS7A-210ENST00000539735 GOLGA3Q08378 1498 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms