RNA–Protein interactions for RNA: ENST00000640119.1

HNRNPU-225, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-225ENST00000640119 NISCHQ9Y2I1 1504 aa28.98■■■□□ 2.23
HNRNPU-225ENST00000640119 CCDC180Q9P1Z9 1646 aa25.88■■□□□ 1.73
HNRNPU-225ENST00000640119 ABCC9O60706 1549 aa25.35■■□□□ 1.65
HNRNPU-225ENST00000640119 RB1CC1Q8TDY2 1594 aa24.33■■□□□ 1.49
HNRNPU-225ENST00000640119 NACADO15069 1562 aa24.29■■□□□ 1.48
HNRNPU-225ENST00000640119 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
HNRNPU-225ENST00000640119 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
HNRNPU-225ENST00000640119 DCAF8L2P0C7V8 631 aa24.04■■□□□ 1.44
HNRNPU-225ENST00000640119 DCAF1Q9Y4B6 1507 aa23.97■■□□□ 1.43
HNRNPU-225ENST00000640119 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
HNRNPU-225ENST00000640119 BICRAQ9NZM4 1560 aa23.7■■□□□ 1.38
HNRNPU-225ENST00000640119 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
HNRNPU-225ENST00000640119 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
HNRNPU-225ENST00000640119 DNAJC5BQ9UF47 199 aa23.35■■□□□ 1.33
HNRNPU-225ENST00000640119 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
HNRNPU-225ENST00000640119 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
HNRNPU-225ENST00000640119 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
HNRNPU-225ENST00000640119 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
HNRNPU-225ENST00000640119 SMARCA4P51532 1647 aa22.56■■□□□ 1.2
HNRNPU-225ENST00000640119 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
HNRNPU-225ENST00000640119 ATAD2BQ9ULI0 1458 aa22.41■■□□□ 1.18
HNRNPU-225ENST00000640119 NCAPD3P42695 1498 aa22.38■■□□□ 1.17
HNRNPU-225ENST00000640119 SMARCA2P51531 1590 aa22.37■■□□□ 1.17
HNRNPU-225ENST00000640119 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
HNRNPU-225ENST00000640119 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
HNRNPU-225ENST00000640119 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
HNRNPU-225ENST00000640119 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
HNRNPU-225ENST00000640119 WIZO95785 1651 aa22.14■■□□□ 1.14
HNRNPU-225ENST00000640119 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
HNRNPU-225ENST00000640119 NESP48681 1621 aa21.95■■□□□ 1.1
HNRNPU-225ENST00000640119 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
HNRNPU-225ENST00000640119 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
HNRNPU-225ENST00000640119 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
HNRNPU-225ENST00000640119 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
HNRNPU-225ENST00000640119 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
HNRNPU-225ENST00000640119 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
HNRNPU-225ENST00000640119 CUX2O14529 1486 aa21.65■■□□□ 1.06
HNRNPU-225ENST00000640119 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
HNRNPU-225ENST00000640119 CFTRP13569 1480 aa21.58■■□□□ 1.05
HNRNPU-225ENST00000640119 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.04
HNRNPU-225ENST00000640119 PRDM2Q13029 1718 aa21.56■■□□□ 1.04
HNRNPU-225ENST00000640119 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
HNRNPU-225ENST00000640119 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
HNRNPU-225ENST00000640119 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
HNRNPU-225ENST00000640119 WDR62O43379 1518 aa21.45■■□□□ 1.02
HNRNPU-225ENST00000640119 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
HNRNPU-225ENST00000640119 SUPT5HO00267 1087 aaKnown RBP21.25■□□□□ 0.99
HNRNPU-225ENST00000640119 TOPBP1Q92547 1522 aa21.16■□□□□ 0.98
HNRNPU-225ENST00000640119 DNMBPQ6XZF7 1577 aa21.14■□□□□ 0.98
HNRNPU-225ENST00000640119 ABCC8Q09428 1581 aa21.06■□□□□ 0.96
HNRNPU-225ENST00000640119 DNAJC5Q9H3Z4 198 aa21.03■□□□□ 0.96
HNRNPU-225ENST00000640119 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
HNRNPU-225ENST00000640119 CUX1P39880 1505 aa20.99■□□□□ 0.95
HNRNPU-225ENST00000640119 TARBP1Q13395 1621 aaKnown RBP20.99■□□□□ 0.95
HNRNPU-225ENST00000640119 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
HNRNPU-225ENST00000640119 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
HNRNPU-225ENST00000640119 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
HNRNPU-225ENST00000640119 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
HNRNPU-225ENST00000640119 RAD54L2Q9Y4B4 1467 aa20.88■□□□□ 0.93
HNRNPU-225ENST00000640119 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
HNRNPU-225ENST00000640119 BIVM-ERCC5R4GMW8 1640 aa20.82■□□□□ 0.92
HNRNPU-225ENST00000640119 SOGA1O94964 1423 aa20.8■□□□□ 0.92
HNRNPU-225ENST00000640119 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.922e-12■■■■□ 25.6
HNRNPU-225ENST00000640119 SYNJ1O43426 1573 aa20.8■□□□□ 0.92
HNRNPU-225ENST00000640119 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
HNRNPU-225ENST00000640119 CHD1O14646 1710 aa20.73■□□□□ 0.91
HNRNPU-225ENST00000640119 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
HNRNPU-225ENST00000640119 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
HNRNPU-225ENST00000640119 ABCA5Q8WWZ7 1642 aa20.7■□□□□ 0.9
HNRNPU-225ENST00000640119 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
HNRNPU-225ENST00000640119 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
HNRNPU-225ENST00000640119 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
HNRNPU-225ENST00000640119 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
HNRNPU-225ENST00000640119 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
HNRNPU-225ENST00000640119 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
HNRNPU-225ENST00000640119 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
HNRNPU-225ENST00000640119 ADAMTS12P58397 1594 aa20.5■□□□□ 0.87
HNRNPU-225ENST00000640119 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
HNRNPU-225ENST00000640119 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
HNRNPU-225ENST00000640119 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
HNRNPU-225ENST00000640119 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
HNRNPU-225ENST00000640119 CLASP1Q7Z460 1538 aa20.47■□□□□ 0.87
HNRNPU-225ENST00000640119 FBLN2P98095 1184 aa20.44■□□□□ 0.86
HNRNPU-225ENST00000640119 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
HNRNPU-225ENST00000640119 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
HNRNPU-225ENST00000640119 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
HNRNPU-225ENST00000640119 CHMP7Q8WUX9 453 aaPredicted RBP20.37■□□□□ 0.85
HNRNPU-225ENST00000640119 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
HNRNPU-225ENST00000640119 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
HNRNPU-225ENST00000640119 NUP160Q12769 1436 aa20.3■□□□□ 0.84
HNRNPU-225ENST00000640119 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
HNRNPU-225ENST00000640119 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
HNRNPU-225ENST00000640119 KIF27Q86VH2 1401 aa20.27■□□□□ 0.84
HNRNPU-225ENST00000640119 CUL7Q14999 1698 aa20.26■□□□□ 0.83
HNRNPU-225ENST00000640119 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
HNRNPU-225ENST00000640119 IGF1RP08069 1367 aa20.21■□□□□ 0.83
HNRNPU-225ENST00000640119 RUSC2Q8N2Y8 1516 aa20.21■□□□□ 0.83
HNRNPU-225ENST00000640119 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
HNRNPU-225ENST00000640119 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
HNRNPU-225ENST00000640119 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms