RNA–Protein interactions for RNA: ENST00000626119.2

COPS7A-222, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-222ENST00000626119 NISCHQ9Y2I1 1504 aa43.29■■■■■ 4.52
COPS7A-222ENST00000626119 CCDC180Q9P1Z9 1646 aa37.34■■■■□ 3.57
COPS7A-222ENST00000626119 ZCCHC6Q5VYS8 1495 aaKnown RBP36.54■■■■□ 3.44
COPS7A-222ENST00000626119 DCAF1Q9Y4B6 1507 aa35.87■■■■□ 3.33
COPS7A-222ENST00000626119 SHROOM4Q9ULL8 1493 aa35.83■■■■□ 3.33
COPS7A-222ENST00000626119 DCAF8L2P0C7V8 631 aa35.45■■■■□ 3.27
COPS7A-222ENST00000626119 MYO15BQ96JP2 1530 aa35.13■■■■□ 3.21
COPS7A-222ENST00000626119 SUPT5HO00267 1087 aaKnown RBP34.97■■■■□ 3.19
COPS7A-222ENST00000626119 NACADO15069 1562 aa34.61■■■■□ 3.13
COPS7A-222ENST00000626119 ABCC9O60706 1549 aa34.48■■■■□ 3.11
COPS7A-222ENST00000626119 SCRIBQ14160 1630 aa34.4■■■■□ 3.1
COPS7A-222ENST00000626119 RB1CC1Q8TDY2 1594 aa34.09■■■■□ 3.05
COPS7A-222ENST00000626119 CHIC1Q5VXU3 224 aa33.97■■■■□ 3.03
COPS7A-222ENST00000626119 RSF1Q96T23 1441 aaPredicted RBP33.92■■■■□ 3.02
COPS7A-222ENST00000626119 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
COPS7A-222ENST00000626119 MROH2BQ7Z745 1585 aa33.44■■■□□ 2.94
COPS7A-222ENST00000626119 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
COPS7A-222ENST00000626119 UNC13AQ9UPW8 1703 aa33.34■■■□□ 2.93
COPS7A-222ENST00000626119 WIZO95785 1651 aa33.19■■■□□ 2.9
COPS7A-222ENST00000626119 SMARCA4P51532 1647 aa33.07■■■□□ 2.88
COPS7A-222ENST00000626119 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
COPS7A-222ENST00000626119 TOP2AP11388 1531 aaKnown RBP32.93■■■□□ 2.86
COPS7A-222ENST00000626119 TRIM41Q8WV44 630 aa32.88■■■□□ 2.85
COPS7A-222ENST00000626119 PABPN1Q86U42 306 aaKnown RBP eCLIP32.7■■■□□ 2.82
COPS7A-222ENST00000626119 EIF4G1Q04637 1599 aaKnown RBP32.69■■■□□ 2.82
COPS7A-222ENST00000626119 PEG3Q9GZU2 1588 aa32.69■■■□□ 2.82
COPS7A-222ENST00000626119 LOC105371045A0A1W2PR82 267 aa32.65■■■□□ 2.82
COPS7A-222ENST00000626119 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
COPS7A-222ENST00000626119 CCDC88BA6NC98 1476 aa32.6■■■□□ 2.81
COPS7A-222ENST00000626119 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
COPS7A-222ENST00000626119 FAM9AQ8IZU1 332 aaPredicted RBP32.21■■■□□ 2.75
COPS7A-222ENST00000626119 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
COPS7A-222ENST00000626119 ABCC8Q09428 1581 aa32.13■■■□□ 2.73
COPS7A-222ENST00000626119 PCGF6Q9BYE7 350 aa32.12■■■□□ 2.73
COPS7A-222ENST00000626119 EEA1Q15075 1411 aa31.99■■■□□ 2.71
COPS7A-222ENST00000626119 TRIM26Q12899 539 aaPredicted RBP31.98■■■□□ 2.71
COPS7A-222ENST00000626119 HMGXB3Q12766 1538 aa31.96■■■□□ 2.71
COPS7A-222ENST00000626119 NCAPD3P42695 1498 aa31.95■■■□□ 2.7
COPS7A-222ENST00000626119 HRCP23327 699 aa31.94■■■□□ 2.7
COPS7A-222ENST00000626119 WRNQ14191 1432 aaPredicted RBP eCLIP31.92■■■□□ 2.7
COPS7A-222ENST00000626119 SOGA1O94964 1423 aa31.75■■■□□ 2.67
COPS7A-222ENST00000626119 CSRNP3Q8WYN3 585 aa31.69■■■□□ 2.66
COPS7A-222ENST00000626119 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
COPS7A-222ENST00000626119 EHMT2Q96KQ7 1210 aa31.66■■■□□ 2.66
COPS7A-222ENST00000626119 TNIKQ9UKE5 1360 aa31.63■■■□□ 2.65
COPS7A-222ENST00000626119 TOP2BQ02880 1626 aa31.54■■■□□ 2.64
COPS7A-222ENST00000626119 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
COPS7A-222ENST00000626119 GOLGA3Q08378 1498 aa31.53■■■□□ 2.64
COPS7A-222ENST00000626119 BIVM-ERCC5R4GMW8 1640 aa31.48■■■□□ 2.63
COPS7A-222ENST00000626119 CFTRP13569 1480 aa31.47■■■□□ 2.63
COPS7A-222ENST00000626119 CEP162Q5TB80 1403 aa31.46■■■□□ 2.63
COPS7A-222ENST00000626119 KIF21BO75037 1637 aa31.45■■■□□ 2.63
COPS7A-222ENST00000626119 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.63
COPS7A-222ENST00000626119 UBTFP17480 764 aaKnown RBP31.34■■■□□ 2.61
COPS7A-222ENST00000626119 PRDM2Q13029 1718 aa31.31■■■□□ 2.6
COPS7A-222ENST00000626119 CC2D2AQ9P2K1 1620 aa31.24■■■□□ 2.59
COPS7A-222ENST00000626119 ZEB1P37275 1124 aaPredicted RBP31.24■■■□□ 2.59
COPS7A-222ENST00000626119 CUX1P39880 1505 aa31.21■■■□□ 2.59
COPS7A-222ENST00000626119 CADPSQ9ULU8 1353 aa31.19■■■□□ 2.58
COPS7A-222ENST00000626119 ERICH3Q5RHP9 1530 aa31.11■■■□□ 2.57
COPS7A-222ENST00000626119 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
COPS7A-222ENST00000626119 KIF27Q86VH2 1401 aa31.06■■■□□ 2.56
COPS7A-222ENST00000626119 PRXQ9BXM0 1461 aa31.05■■■□□ 2.56
COPS7A-222ENST00000626119 CLIP1P30622 1438 aa31.04■■■□□ 2.56
COPS7A-222ENST00000626119 PPARGC1BQ86YN6 1023 aaKnown RBP30.98■■■□□ 2.55
COPS7A-222ENST00000626119 VPS8Q8N3P4 1428 aa30.91■■■□□ 2.54
COPS7A-222ENST00000626119 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.52
COPS7A-222ENST00000626119 FGD5Q6ZNL6 1462 aa30.75■■■□□ 2.51
COPS7A-222ENST00000626119 CUX2O14529 1486 aa30.73■■■□□ 2.51
COPS7A-222ENST00000626119 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
COPS7A-222ENST00000626119 DNMBPQ6XZF7 1577 aa30.7■■■□□ 2.51
COPS7A-222ENST00000626119 APLP2Q06481 763 aa30.69■■■□□ 2.5
COPS7A-222ENST00000626119 IGF1RP08069 1367 aa30.67■■■□□ 2.5
COPS7A-222ENST00000626119 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
COPS7A-222ENST00000626119 TOPBP1Q92547 1522 aa30.57■■■□□ 2.48
COPS7A-222ENST00000626119 TTBK1Q5TCY1 1321 aaPredicted RBP30.55■■■□□ 2.48
COPS7A-222ENST00000626119 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
COPS7A-222ENST00000626119 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
COPS7A-222ENST00000626119 CCER1Q8TC90 406 aaPredicted RBP30.54■■■□□ 2.48
COPS7A-222ENST00000626119 NESP48681 1621 aa30.53■■■□□ 2.48
COPS7A-222ENST00000626119 POLA1P09884 1462 aaPredicted RBP30.49■■■□□ 2.47
COPS7A-222ENST00000626119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.48■■■□□ 2.47
COPS7A-222ENST00000626119 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
COPS7A-222ENST00000626119 RANGAP1P46060 587 aaPredicted RBP30.46■■■□□ 2.47
COPS7A-222ENST00000626119 ARHGAP35Q9NRY4 1499 aa30.44■■■□□ 2.46
COPS7A-222ENST00000626119 RAD54L2Q9Y4B4 1467 aa30.36■■■□□ 2.45
COPS7A-222ENST00000626119 CUL7Q14999 1698 aa30.36■■■□□ 2.45
COPS7A-222ENST00000626119 URB2Q14146 1524 aaKnown RBP30.35■■■□□ 2.45
COPS7A-222ENST00000626119 WDR97A6NE52 1622 aa30.3■■■□□ 2.44
COPS7A-222ENST00000626119 MAP3K1Q13233 1512 aa30.27■■■□□ 2.44
COPS7A-222ENST00000626119 FHAD1B1AJZ9 1412 aa30.19■■■□□ 2.42
COPS7A-222ENST00000626119 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
COPS7A-222ENST00000626119 EFCAB5A4FU69 1503 aa30.17■■■□□ 2.42
COPS7A-222ENST00000626119 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
COPS7A-222ENST00000626119 RRBP1Q9P2E9 1410 aaKnown RBP30.14■■■□□ 2.42
COPS7A-222ENST00000626119 HNRNPUL2Q1KMD3 747 aaKnown RBP30.14■■■□□ 2.42
COPS7A-222ENST00000626119 KANK4Q5T7N3 995 aaPredicted RBP30.14■■■□□ 2.42
COPS7A-222ENST00000626119 GAPVD1Q14C86 1478 aa30.1■■■□□ 2.41
COPS7A-222ENST00000626119 CTTNBP2Q8WZ74 1663 aa30.1■■■□□ 2.41
COPS7A-222ENST00000626119 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms