RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
SEC22A-204ENST00000473494 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
SEC22A-204ENST00000473494 PHF23Q9BUL5 403 aaPredicted RBP24.27■■□□□ 1.48
SEC22A-204ENST00000473494 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
SEC22A-204ENST00000473494 PLPPR3Q6T4P5 718 aa22.62■■□□□ 1.21
SEC22A-204ENST00000473494 FOXD1Q16676 465 aa21.58■■□□□ 1.05
SEC22A-204ENST00000473494 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
SEC22A-204ENST00000473494 ADRA2BP18089 450 aa21.17■□□□□ 0.98
SEC22A-204ENST00000473494 PIAS4Q8N2W9 510 aaPredicted RBP20.48■□□□□ 0.87
SEC22A-204ENST00000473494 KCNA4P22459 653 aa20.17■□□□□ 0.82
SEC22A-204ENST00000473494 PPP4R3CPQ6ZMV5 832 aa19.97■□□□□ 0.79
SEC22A-204ENST00000473494 MSH5O43196 834 aa19.7■□□□□ 0.74
SEC22A-204ENST00000473494 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
SEC22A-204ENST00000473494 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
SEC22A-204ENST00000473494 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
SEC22A-204ENST00000473494 NPM3O75607 178 aaKnown RBP19.35■□□□□ 0.69
SEC22A-204ENST00000473494 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
SEC22A-204ENST00000473494 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
SEC22A-204ENST00000473494 MAPK8IP2Q13387 824 aaPredicted RBP19.01■□□□□ 0.63
SEC22A-204ENST00000473494 CSRNP3Q8WYN3 585 aa18.93■□□□□ 0.62
SEC22A-204ENST00000473494 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
SEC22A-204ENST00000473494 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
SEC22A-204ENST00000473494 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
SEC22A-204ENST00000473494 ZBTB22O15209 634 aa18.61■□□□□ 0.57
SEC22A-204ENST00000473494 HOXD11P31277 338 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-204ENST00000473494 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
SEC22A-204ENST00000473494 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
SEC22A-204ENST00000473494 MYCNP04198 464 aaPredicted RBP17.89■□□□□ 0.45
SEC22A-204ENST00000473494 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
SEC22A-204ENST00000473494 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
SEC22A-204ENST00000473494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■■□□□ 11.9
SEC22A-204ENST00000473494 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
SEC22A-204ENST00000473494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
SEC22A-204ENST00000473494 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
SEC22A-204ENST00000473494 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
SEC22A-204ENST00000473494 ATF5Q9Y2D1 282 aaPredicted RBP17.32■□□□□ 0.36
SEC22A-204ENST00000473494 APLP2Q06481 763 aa17.13■□□□□ 0.33
SEC22A-204ENST00000473494 FKBP8Q14318 412 aa17.06■□□□□ 0.32
SEC22A-204ENST00000473494 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
SEC22A-204ENST00000473494 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
SEC22A-204ENST00000473494 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
SEC22A-204ENST00000473494 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
SEC22A-204ENST00000473494 C1QBPQ07021 282 aaKnown RBP16.76■□□□□ 0.27
SEC22A-204ENST00000473494 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
SEC22A-204ENST00000473494 CAPN15O75808 1086 aa16.64■□□□□ 0.25
SEC22A-204ENST00000473494 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
SEC22A-204ENST00000473494 AMER1Q5JTC6 1135 aaPredicted RBP16.61■□□□□ 0.25
SEC22A-204ENST00000473494 POLA2Q14181 598 aa16.56■□□□□ 0.24
SEC22A-204ENST00000473494 FBLN2P98095 1184 aa16.55■□□□□ 0.24
SEC22A-204ENST00000473494 RTN4Q9NQC3 1192 aaKnown RBP16.55■□□□□ 0.24
SEC22A-204ENST00000473494 SPDYE4A6NLX3 237 aa16.5■□□□□ 0.23
SEC22A-204ENST00000473494 PROM2Q8N271 834 aa16.43■□□□□ 0.22
SEC22A-204ENST00000473494 ZBTB12Q9Y330 459 aaPredicted RBP16.43■□□□□ 0.22
SEC22A-204ENST00000473494 ABCB7O75027 752 aa16.39■□□□□ 0.21
SEC22A-204ENST00000473494 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
SEC22A-204ENST00000473494 DSG3P32926 999 aa16.3■□□□□ 0.2
SEC22A-204ENST00000473494 VASPP50552 380 aaPredicted RBP16.1■□□□□ 0.17
SEC22A-204ENST00000473494 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
SEC22A-204ENST00000473494 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
SEC22A-204ENST00000473494 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
SEC22A-204ENST00000473494 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
SEC22A-204ENST00000473494 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
SEC22A-204ENST00000473494 CACNB1Q02641 598 aaPredicted RBP15.99■□□□□ 0.15
SEC22A-204ENST00000473494 ZNF692Q9BU19 519 aaPredicted RBP15.97■□□□□ 0.15
SEC22A-204ENST00000473494 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
SEC22A-204ENST00000473494 IFNLR1Q8IU57 520 aaPredicted RBP15.9■□□□□ 0.14
SEC22A-204ENST00000473494 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
SEC22A-204ENST00000473494 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
SEC22A-204ENST00000473494 PKD2Q13563 968 aa15.61■□□□□ 0.09
SEC22A-204ENST00000473494 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
SEC22A-204ENST00000473494 PLCD3Q8N3E9 789 aa15.58■□□□□ 0.08
SEC22A-204ENST00000473494 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
SEC22A-204ENST00000473494 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
SEC22A-204ENST00000473494 MIER1Q8N108 512 aa15.51■□□□□ 0.07
SEC22A-204ENST00000473494 AKT1S1Q96B36 256 aa15.45■□□□□ 0.06
SEC22A-204ENST00000473494 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
SEC22A-204ENST00000473494 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
SEC22A-204ENST00000473494 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
SEC22A-204ENST00000473494 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
SEC22A-204ENST00000473494 DCAF8L2P0C7V8 631 aa15.35■□□□□ 0.05
SEC22A-204ENST00000473494 PLCB2Q00722 1185 aa15.33■□□□□ 0.04
SEC22A-204ENST00000473494 REM2Q8IYK8 340 aaPredicted RBP15.27■□□□□ 0.04
SEC22A-204ENST00000473494 RGL2O15211 777 aa15.22■□□□□ 0.03
SEC22A-204ENST00000473494 CLEC11AQ9Y240 323 aa15.21■□□□□ 0.03
SEC22A-204ENST00000473494 TRIM41Q8WV44 630 aa15.2■□□□□ 0.02
SEC22A-204ENST00000473494 CIZ1Q9ULV3 898 aaPredicted RBP15.2■□□□□ 0.02
SEC22A-204ENST00000473494 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
SEC22A-204ENST00000473494 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
SEC22A-204ENST00000473494 NUBP1P53384 320 aa15.16■□□□□ 0.02
SEC22A-204ENST00000473494 MNX1P50219 401 aaPredicted RBP15.13■□□□□ 0.01
SEC22A-204ENST00000473494 GSE1Q14687 1217 aa15.13■□□□□ 0.01
SEC22A-204ENST00000473494 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
SEC22A-204ENST00000473494 BBXQ8WY36 941 aaPredicted RBP15.11■□□□□ 0.01
SEC22A-204ENST00000473494 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
SEC22A-204ENST00000473494 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
SEC22A-204ENST00000473494 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
SEC22A-204ENST00000473494 RNF25Q96BH1 459 aaPredicted RBP15.01□□□□□ -0.01
SEC22A-204ENST00000473494 FAM212AQ96EL1 285 aa15.01□□□□□ -0.01
SEC22A-204ENST00000473494 DCAF8Q5TAQ9 597 aa14.97□□□□□ -0.01
SEC22A-204ENST00000473494 RASEFQ8IZ41 740 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms