RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
GGCX-201ENST00000233838 NISCHQ9Y2I1 1504 aa12.98□□□□□ -0.33
GGCX-201ENST00000233838 SUPT5HO00267 1087 aaKnown RBP12.89□□□□□ -0.35
GGCX-201ENST00000233838 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
GGCX-201ENST00000233838 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
GGCX-201ENST00000233838 SHROOM4Q9ULL8 1493 aa12.61□□□□□ -0.39
GGCX-201ENST00000233838 APLP2Q06481 763 aa12.51□□□□□ -0.41
GGCX-201ENST00000233838 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
GGCX-201ENST00000233838 TTBK1Q5TCY1 1321 aaPredicted RBP12.4□□□□□ -0.42
GGCX-201ENST00000233838 FAM9AQ8IZU1 332 aaPredicted RBP12.33□□□□□ -0.43
GGCX-201ENST00000233838 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
GGCX-201ENST00000233838 RANGAP1P46060 587 aaPredicted RBP12.21□□□□□ -0.45
GGCX-201ENST00000233838 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
GGCX-201ENST00000233838 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
GGCX-201ENST00000233838 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
GGCX-201ENST00000233838 NEFLP07196 543 aa12□□□□□ -0.49
GGCX-201ENST00000233838 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
GGCX-201ENST00000233838 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.5
GGCX-201ENST00000233838 MYT1Q01538 1121 aa11.91□□□□□ -0.5
GGCX-201ENST00000233838 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
GGCX-201ENST00000233838 UBTFP17480 764 aaKnown RBP11.87□□□□□ -0.51
GGCX-201ENST00000233838 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
GGCX-201ENST00000233838 MYT1LQ9UL68 1186 aa11.77□□□□□ -0.53
GGCX-201ENST00000233838 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
GGCX-201ENST00000233838 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
GGCX-201ENST00000233838 CNGB1Q14028 1251 aaPredicted RBP11.66□□□□□ -0.54
GGCX-201ENST00000233838 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.55
GGCX-201ENST00000233838 ITGAEP38570 1179 aa11.64□□□□□ -0.55
GGCX-201ENST00000233838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
GGCX-201ENST00000233838 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
GGCX-201ENST00000233838 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
GGCX-201ENST00000233838 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
GGCX-201ENST00000233838 CLSPNQ9HAW4 1339 aa11.49□□□□□ -0.57
GGCX-201ENST00000233838 TRIM26Q12899 539 aaPredicted RBP11.49□□□□□ -0.57
GGCX-201ENST00000233838 RTL5Q5HYW3 569 aaPredicted RBP11.46□□□□□ -0.58
GGCX-201ENST00000233838 HRCP23327 699 aa11.42□□□□□ -0.58
GGCX-201ENST00000233838 FAM50AQ14320 339 aaKnown RBP11.28□□□□□ -0.6
GGCX-201ENST00000233838 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
GGCX-201ENST00000233838 TRIM52Q96A61 297 aa11.27□□□□□ -0.6
GGCX-201ENST00000233838 SLC24A1O60721 1099 aa11.27□□□□□ -0.61
GGCX-201ENST00000233838 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
GGCX-201ENST00000233838 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
GGCX-201ENST00000233838 BCANQ96GW7 911 aa11.26□□□□□ -0.61
GGCX-201ENST00000233838 DIEXFQ68CQ4 756 aaKnown RBP11.24□□□□□ -0.61
GGCX-201ENST00000233838 NEUROD1Q13562 356 aa11.23□□□□□ -0.61
GGCX-201ENST00000233838 ZNF326Q5BKZ1 582 aaKnown RBP11.19□□□□□ -0.62
GGCX-201ENST00000233838 CANXP27824 592 aaKnown RBP11.18□□□□□ -0.62
GGCX-201ENST00000233838 CDK11AQ9UQ88 783 aaPredicted RBP11.15□□□□□ -0.62
GGCX-201ENST00000233838 ANP32CO43423 234 aa11.12□□□□□ -0.63
GGCX-201ENST00000233838 NEFMP07197 916 aa11.07□□□□□ -0.64
GGCX-201ENST00000233838 GTF3C3Q9Y5Q9 886 aa11.06□□□□□ -0.64
GGCX-201ENST00000233838 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
GGCX-201ENST00000233838 FBLN2P98095 1184 aa11.02□□□□□ -0.65
GGCX-201ENST00000233838 ANP32AP39687 249 aaKnown RBP11□□□□□ -0.65
GGCX-201ENST00000233838 ARID3CA6NKF2 412 aa10.95□□□□□ -0.66
GGCX-201ENST00000233838 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
GGCX-201ENST00000233838 HSP90AA1P07900 732 aaKnown RBP10.92□□□□□ -0.66
GGCX-201ENST00000233838 EIF5BO60841 1220 aaKnown RBP10.92□□□□□ -0.66
GGCX-201ENST00000233838 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
GGCX-201ENST00000233838 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
GGCX-201ENST00000233838 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
GGCX-201ENST00000233838 CCDC180Q9P1Z9 1646 aa10.89□□□□□ -0.67
GGCX-201ENST00000233838 P3H3Q8IVL6 736 aa10.88□□□□□ -0.67
GGCX-201ENST00000233838 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
GGCX-201ENST00000233838 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
GGCX-201ENST00000233838 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
GGCX-201ENST00000233838 ZCCHC6Q5VYS8 1495 aaKnown RBP10.83□□□□□ -0.68
GGCX-201ENST00000233838 UPF2Q9HAU5 1272 aaKnown RBP10.83□□□□□ -0.68
GGCX-201ENST00000233838 ARXQ96QS3 562 aa10.81□□□□□ -0.68
GGCX-201ENST00000233838 FKBP8Q14318 412 aa10.8□□□□□ -0.68
GGCX-201ENST00000233838 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
GGCX-201ENST00000233838 ABCC9O60706 1549 aa10.77□□□□□ -0.68
GGCX-201ENST00000233838 ACIN1Q9UKV3 1341 aaKnown RBP10.77□□□□□ -0.68
GGCX-201ENST00000233838 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
GGCX-201ENST00000233838 NBR1Q14596 966 aa10.76□□□□□ -0.69
GGCX-201ENST00000233838 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
GGCX-201ENST00000233838 GLIPR1L2Q4G1C9 344 aa10.75□□□□□ -0.69
GGCX-201ENST00000233838 CDK11BP21127 795 aaKnown RBP10.74□□□□□ -0.69
GGCX-201ENST00000233838 A0A0G2JS52 829 aa10.73□□□□□ -0.69
GGCX-201ENST00000233838 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
GGCX-201ENST00000233838 TONSLQ96HA7 1378 aa10.71□□□□□ -0.69
GGCX-201ENST00000233838 ZBTB7CA1YPR0 619 aa10.69□□□□□ -0.7
GGCX-201ENST00000233838 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
GGCX-201ENST00000233838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.74e-6■■■□□ 14.9
GGCX-201ENST00000233838 WDR43Q15061 677 aaKnown RBP eCLIP10.68□□□□□ -0.7
GGCX-201ENST00000233838 SCRIBQ14160 1630 aa10.67□□□□□ -0.7
GGCX-201ENST00000233838 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
GGCX-201ENST00000233838 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
GGCX-201ENST00000233838 DDX10Q13206 875 aaKnown RBP10.66□□□□□ -0.7
GGCX-201ENST00000233838 TMC1Q8TDI8 760 aa10.65□□□□□ -0.7
GGCX-201ENST00000233838 MYH16Q9H6N6 1097 aa10.65□□□□□ -0.7
GGCX-201ENST00000233838 DCAF1Q9Y4B6 1507 aa10.64□□□□□ -0.71
GGCX-201ENST00000233838 SENP3Q9H4L4 574 aaPredicted RBP10.63□□□□□ -0.71
GGCX-201ENST00000233838 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
GGCX-201ENST00000233838 KDM2AQ9Y2K7 1162 aa10.61□□□□□ -0.71
GGCX-201ENST00000233838 CHIC2Q9UKJ5 165 aa10.61□□□□□ -0.71
GGCX-201ENST00000233838 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
GGCX-201ENST00000233838 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
GGCX-201ENST00000233838 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
GGCX-201ENST00000233838 NCLP19338 710 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms