RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 DCAF8L2P0C7V8 631 aa10.79□□□□□ -0.68
TTC3-201ENST00000354749 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
TTC3-201ENST00000354749 SUPT5HO00267 1087 aaKnown RBP10.49□□□□□ -0.73
TTC3-201ENST00000354749 NISCHQ9Y2I1 1504 aa10.41□□□□□ -0.74
TTC3-201ENST00000354749 SHROOM4Q9ULL8 1493 aa10.22□□□□□ -0.77
TTC3-201ENST00000354749 APLP2Q06481 763 aa10.13□□□□□ -0.79
TTC3-201ENST00000354749 CENPBP07199 599 aaPredicted RBP10.09□□□□□ -0.79
TTC3-201ENST00000354749 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
TTC3-201ENST00000354749 MYT1Q01538 1121 aa10.06□□□□□ -0.8
TTC3-201ENST00000354749 ZEB1P37275 1124 aaPredicted RBP10.04□□□□□ -0.8
TTC3-201ENST00000354749 PCGF6Q9BYE7 350 aa10.03□□□□□ -0.8
TTC3-201ENST00000354749 CCER1Q8TC90 406 aaPredicted RBP10.01□□□□□ -0.81
TTC3-201ENST00000354749 ERICH6Q7L0X2 663 aa9.98□□□□□ -0.81
TTC3-201ENST00000354749 FAM9AQ8IZU1 332 aaPredicted RBP9.87□□□□□ -0.83
TTC3-201ENST00000354749 TTBK1Q5TCY1 1321 aaPredicted RBP9.83□□□□□ -0.84
TTC3-201ENST00000354749 NEFLP07196 543 aa9.82□□□□□ -0.84
TTC3-201ENST00000354749 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
TTC3-201ENST00000354749 YTHDC1Q96MU7 727 aaKnown RBP9.71□□□□□ -0.86
TTC3-201ENST00000354749 RANGAP1P46060 587 aaPredicted RBP9.63□□□□□ -0.87
TTC3-201ENST00000354749 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
TTC3-201ENST00000354749 HRCP23327 699 aa9.63□□□□□ -0.87
TTC3-201ENST00000354749 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
TTC3-201ENST00000354749 DAXXQ9UER7 740 aaPredicted RBP9.54□□□□□ -0.88
TTC3-201ENST00000354749 ATP1B4Q9UN42 357 aaPredicted RBP9.54□□□□□ -0.88
TTC3-201ENST00000354749 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
TTC3-201ENST00000354749 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
TTC3-201ENST00000354749 CHIC1Q5VXU3 224 aa9.35□□□□□ -0.91
TTC3-201ENST00000354749 DIEXFQ68CQ4 756 aaKnown RBP9.34□□□□□ -0.91
TTC3-201ENST00000354749 ZNF316A6NFI3 1004 aaPredicted RBP9.33□□□□□ -0.92
TTC3-201ENST00000354749 ITGAEP38570 1179 aa9.3□□□□□ -0.92
TTC3-201ENST00000354749 HNRNPUL2Q1KMD3 747 aaKnown RBP9.3□□□□□ -0.92
TTC3-201ENST00000354749 POLR3GLQ9BT43 218 aa9.29□□□□□ -0.92
TTC3-201ENST00000354749 LOC105371045A0A1W2PR82 267 aa9.27□□□□□ -0.93
TTC3-201ENST00000354749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.25□□□□□ -0.93
TTC3-201ENST00000354749 CLSPNQ9HAW4 1339 aa9.23□□□□□ -0.93
TTC3-201ENST00000354749 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
TTC3-201ENST00000354749 CDK11AQ9UQ88 783 aaPredicted RBP9.15□□□□□ -0.94
TTC3-201ENST00000354749 CNGB1Q14028 1251 aaPredicted RBP9.14□□□□□ -0.95
TTC3-201ENST00000354749 MYT1LQ9UL68 1186 aa9.14□□□□□ -0.95
TTC3-201ENST00000354749 BCANQ96GW7 911 aa9.13□□□□□ -0.95
TTC3-201ENST00000354749 ANP32CO43423 234 aa9.12□□□□□ -0.95
TTC3-201ENST00000354749 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
TTC3-201ENST00000354749 FAM50AQ14320 339 aaKnown RBP9.09□□□□□ -0.95
TTC3-201ENST00000354749 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
TTC3-201ENST00000354749 ANP32AP39687 249 aaKnown RBP9.06□□□□□ -0.96
TTC3-201ENST00000354749 TRIM52Q96A61 297 aa9.04□□□□□ -0.96
TTC3-201ENST00000354749 NEUROD1Q13562 356 aa9.04□□□□□ -0.96
TTC3-201ENST00000354749 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
TTC3-201ENST00000354749 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
TTC3-201ENST00000354749 ZNF326Q5BKZ1 582 aaKnown RBP8.98□□□□□ -0.97
TTC3-201ENST00000354749 DCAF1Q9Y4B6 1507 aa8.95□□□□□ -0.98
TTC3-201ENST00000354749 GLIPR1L2Q4G1C9 344 aa8.93□□□□□ -0.98
TTC3-201ENST00000354749 ANP32BQ92688 251 aaKnown RBP8.93□□□□□ -0.98
TTC3-201ENST00000354749 NEFMP07197 916 aa8.89□□□□□ -0.99
TTC3-201ENST00000354749 EIF5BO60841 1220 aaKnown RBP8.89□□□□□ -0.99
TTC3-201ENST00000354749 NPM2Q86SE8 214 aaKnown RBP8.89□□□□□ -0.99
TTC3-201ENST00000354749 FKBP8Q14318 412 aa8.88□□□□□ -0.99
TTC3-201ENST00000354749 UPF2Q9HAU5 1272 aaKnown RBP8.86□□□□□ -0.99
TTC3-201ENST00000354749 TONSLQ96HA7 1378 aa8.86□□□□□ -0.99
TTC3-201ENST00000354749 HSP90AA1P07900 732 aaKnown RBP8.84□□□□□ -0.99
TTC3-201ENST00000354749 CSRNP3Q8WYN3 585 aa8.84□□□□□ -0.99
TTC3-201ENST00000354749 HNRNPUQ00839 825 aaKnown RBP eCLIP8.82□□□□□ -1
TTC3-201ENST00000354749 CCDC136Q96JN2 1154 aa8.78□□□□□ -1
TTC3-201ENST00000354749 BCL11AQ9H165 835 aa8.78□□□□□ -1
TTC3-201ENST00000354749 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
TTC3-201ENST00000354749 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.76□□□□□ -1.01
TTC3-201ENST00000354749 ABCC9O60706 1549 aa8.75□□□□□ -1.01
TTC3-201ENST00000354749 NBR1Q14596 966 aa8.75□□□□□ -1.01
TTC3-201ENST00000354749 SLC24A1O60721 1099 aa8.75□□□□□ -1.01
TTC3-201ENST00000354749 FAM9BQ8IZU0 186 aa8.74□□□□□ -1.01
TTC3-201ENST00000354749 DDX10Q13206 875 aaKnown RBP8.73□□□□□ -1.01
TTC3-201ENST00000354749 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
TTC3-201ENST00000354749 MRS2Q9HD23 443 aa8.71□□□□□ -1.02
TTC3-201ENST00000354749 ZNF777Q9ULD5 760 aaPredicted RBP8.7□□□□□ -1.02
TTC3-201ENST00000354749 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
TTC3-201ENST00000354749 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
TTC3-201ENST00000354749 CCDC180Q9P1Z9 1646 aa8.69□□□□□ -1.02
TTC3-201ENST00000354749 FBLN2P98095 1184 aa8.69□□□□□ -1.02
TTC3-201ENST00000354749 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
TTC3-201ENST00000354749 TMC1Q8TDI8 760 aa8.69□□□□□ -1.02
TTC3-201ENST00000354749 ARID3CA6NKF2 412 aa8.68□□□□□ -1.02
TTC3-201ENST00000354749 MIER1Q8N108 512 aa8.68□□□□□ -1.02
TTC3-201ENST00000354749 BECN1Q14457 450 aa8.67□□□□□ -1.02
TTC3-201ENST00000354749 WDR43Q15061 677 aaKnown RBP eCLIP8.66□□□□□ -1.02
TTC3-201ENST00000354749 ZCCHC6Q5VYS8 1495 aaKnown RBP8.66□□□□□ -1.02
TTC3-201ENST00000354749 CLIP1P30622 1438 aa8.65□□□□□ -1.02
TTC3-201ENST00000354749 MYH16Q9H6N6 1097 aa8.65□□□□□ -1.03
TTC3-201ENST00000354749 ARXQ96QS3 562 aa8.64□□□□□ -1.03
TTC3-201ENST00000354749 SCRIBQ14160 1630 aa8.63□□□□□ -1.03
TTC3-201ENST00000354749 GOLGA6L22H0YM25 854 aa8.62□□□□□ -1.03
TTC3-201ENST00000354749 TRIM44Q96DX7 344 aaPredicted RBP8.61□□□□□ -1.03
TTC3-201ENST00000354749 EEA1Q15075 1411 aa8.61□□□□□ -1.03
TTC3-201ENST00000354749 PPM1GO15355 546 aaPredicted RBP8.6□□□□□ -1.03
TTC3-201ENST00000354749 ERICH6BQ5W0A0 696 aa8.6□□□□□ -1.03
TTC3-201ENST00000354749 IRX6P78412 446 aaPredicted RBP8.6□□□□□ -1.03
TTC3-201ENST00000354749 EIF4G2P78344 907 aaKnown RBP eCLIP8.6□□□□□ -1.036e-6■■■■■ 27.4
TTC3-201ENST00000354749 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
TTC3-201ENST00000354749 MTUS2Q5JR59 1369 aa8.59□□□□□ -1.03
TTC3-201ENST00000354749 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.03
TTC3-201ENST00000354749 NCLP19338 710 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms