RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 NISCHQ9Y2I1 1504 aa31.27■■■□□ 2.6
SEC22A-203ENST00000466950 CCDC180Q9P1Z9 1646 aa27.73■■■□□ 2.03
SEC22A-203ENST00000466950 ABCC9O60706 1549 aa26.29■■□□□ 1.8
SEC22A-203ENST00000466950 ZCCHC6Q5VYS8 1495 aaKnown RBP26.22■■□□□ 1.79
SEC22A-203ENST00000466950 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
SEC22A-203ENST00000466950 MYO15BQ96JP2 1530 aa25.92■■□□□ 1.74
SEC22A-203ENST00000466950 NACADO15069 1562 aa25.82■■□□□ 1.72
SEC22A-203ENST00000466950 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.71
SEC22A-203ENST00000466950 DCAF8L2P0C7V8 631 aa25.57■■□□□ 1.68
SEC22A-203ENST00000466950 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
SEC22A-203ENST00000466950 SCRIBQ14160 1630 aa25.18■■□□□ 1.62
SEC22A-203ENST00000466950 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.58
SEC22A-203ENST00000466950 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
SEC22A-203ENST00000466950 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
SEC22A-203ENST00000466950 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
SEC22A-203ENST00000466950 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
SEC22A-203ENST00000466950 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
SEC22A-203ENST00000466950 EIF4G1Q04637 1599 aaKnown RBP24.18■■□□□ 1.46
SEC22A-203ENST00000466950 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
SEC22A-203ENST00000466950 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
SEC22A-203ENST00000466950 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
SEC22A-203ENST00000466950 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
SEC22A-203ENST00000466950 SMARCA2P51531 1590 aa23.91■■□□□ 1.42
SEC22A-203ENST00000466950 WIZO95785 1651 aa23.89■■□□□ 1.41
SEC22A-203ENST00000466950 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
SEC22A-203ENST00000466950 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
SEC22A-203ENST00000466950 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
SEC22A-203ENST00000466950 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
SEC22A-203ENST00000466950 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
SEC22A-203ENST00000466950 SUPT5HO00267 1087 aaKnown RBP23.6■■□□□ 1.37
SEC22A-203ENST00000466950 DNAJC5BQ9UF47 199 aa23.48■■□□□ 1.35
SEC22A-203ENST00000466950 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
SEC22A-203ENST00000466950 PRDM2Q13029 1718 aa23.21■■□□□ 1.31
SEC22A-203ENST00000466950 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
SEC22A-203ENST00000466950 CFTRP13569 1480 aa23.08■■□□□ 1.29
SEC22A-203ENST00000466950 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
SEC22A-203ENST00000466950 NESP48681 1621 aa22.93■■□□□ 1.26
SEC22A-203ENST00000466950 KIF21AQ7Z4S6 1674 aa22.84■■□□□ 1.25
SEC22A-203ENST00000466950 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
SEC22A-203ENST00000466950 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
SEC22A-203ENST00000466950 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
SEC22A-203ENST00000466950 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
SEC22A-203ENST00000466950 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.22
SEC22A-203ENST00000466950 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
SEC22A-203ENST00000466950 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
SEC22A-203ENST00000466950 DNMBPQ6XZF7 1577 aa22.61■■□□□ 1.21
SEC22A-203ENST00000466950 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
SEC22A-203ENST00000466950 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
SEC22A-203ENST00000466950 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
SEC22A-203ENST00000466950 SYNJ1O43426 1573 aa22.58■■□□□ 1.2
SEC22A-203ENST00000466950 CUX1P39880 1505 aa22.57■■□□□ 1.2
SEC22A-203ENST00000466950 WDR62O43379 1518 aa22.57■■□□□ 1.2
SEC22A-203ENST00000466950 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
SEC22A-203ENST00000466950 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
SEC22A-203ENST00000466950 CHIC1Q5VXU3 224 aa22.44■■□□□ 1.18
SEC22A-203ENST00000466950 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
SEC22A-203ENST00000466950 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
SEC22A-203ENST00000466950 WDR97A6NE52 1622 aa22.35■■□□□ 1.17
SEC22A-203ENST00000466950 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
SEC22A-203ENST00000466950 TARBP1Q13395 1621 aaKnown RBP22.3■■□□□ 1.16
SEC22A-203ENST00000466950 CUX2O14529 1486 aa22.29■■□□□ 1.16
SEC22A-203ENST00000466950 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
SEC22A-203ENST00000466950 ABCA10Q8WWZ4 1543 aa22.24■■□□□ 1.15
SEC22A-203ENST00000466950 SOGA1O94964 1423 aa22.22■■□□□ 1.15
SEC22A-203ENST00000466950 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
SEC22A-203ENST00000466950 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
SEC22A-203ENST00000466950 EEA1Q15075 1411 aa22.11■■□□□ 1.13
SEC22A-203ENST00000466950 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
SEC22A-203ENST00000466950 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
SEC22A-203ENST00000466950 KIF27Q86VH2 1401 aa22.08■■□□□ 1.13
SEC22A-203ENST00000466950 ZNF608Q9ULD9 1512 aaPredicted RBP22.03■■□□□ 1.12
SEC22A-203ENST00000466950 GAPVD1Q14C86 1478 aa22.02■■□□□ 1.12
SEC22A-203ENST00000466950 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
SEC22A-203ENST00000466950 CUL7Q14999 1698 aa21.99■■□□□ 1.11
SEC22A-203ENST00000466950 RUSC2Q8N2Y8 1516 aa21.99■■□□□ 1.11
SEC22A-203ENST00000466950 TDRD9Q8NDG6 1382 aaKnown RBP21.96■■□□□ 1.11
SEC22A-203ENST00000466950 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
SEC22A-203ENST00000466950 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.1
SEC22A-203ENST00000466950 KIF21BO75037 1637 aa21.9■■□□□ 1.1
SEC22A-203ENST00000466950 ADAMTS12P58397 1594 aa21.9■■□□□ 1.1
SEC22A-203ENST00000466950 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
SEC22A-203ENST00000466950 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
SEC22A-203ENST00000466950 IGF1RP08069 1367 aa21.87■■□□□ 1.09
SEC22A-203ENST00000466950 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
SEC22A-203ENST00000466950 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
SEC22A-203ENST00000466950 CSRNP3Q8WYN3 585 aa21.82■■□□□ 1.08
SEC22A-203ENST00000466950 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
SEC22A-203ENST00000466950 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
SEC22A-203ENST00000466950 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
SEC22A-203ENST00000466950 SYNJ2O15056 1496 aa21.76■■□□□ 1.07
SEC22A-203ENST00000466950 RAPGEF2Q9Y4G8 1499 aa21.75■■□□□ 1.07
SEC22A-203ENST00000466950 CHD1O14646 1710 aa21.75■■□□□ 1.07
SEC22A-203ENST00000466950 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
SEC22A-203ENST00000466950 CTTNBP2Q8WZ74 1663 aa21.69■■□□□ 1.06
SEC22A-203ENST00000466950 GRIN2AQ12879 1464 aa21.68■■□□□ 1.06
SEC22A-203ENST00000466950 CEP170Q5SW79 1584 aa21.57■■□□□ 1.04
SEC22A-203ENST00000466950 NUP160Q12769 1436 aa21.57■■□□□ 1.04
SEC22A-203ENST00000466950 CHMP7Q8WUX9 453 aaPredicted RBP21.54■■□□□ 1.04
SEC22A-203ENST00000466950 TNIKQ9UKE5 1360 aa21.51■■□□□ 1.03
SEC22A-203ENST00000466950 IQGAP2Q13576 1575 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms