RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 NISCHQ9Y2I1 1504 aa30.33■■■□□ 2.45
SEC22A-205ENST00000477063 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
SEC22A-205ENST00000477063 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
SEC22A-205ENST00000477063 DCAF1Q9Y4B6 1507 aa25.27■■□□□ 1.64
SEC22A-205ENST00000477063 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
SEC22A-205ENST00000477063 ABCC9O60706 1549 aa24.89■■□□□ 1.57
SEC22A-205ENST00000477063 NACADO15069 1562 aa24.8■■□□□ 1.56
SEC22A-205ENST00000477063 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
SEC22A-205ENST00000477063 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
SEC22A-205ENST00000477063 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
SEC22A-205ENST00000477063 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
SEC22A-205ENST00000477063 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
SEC22A-205ENST00000477063 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
SEC22A-205ENST00000477063 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
SEC22A-205ENST00000477063 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
SEC22A-205ENST00000477063 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
SEC22A-205ENST00000477063 CECR2Q9BXF3 1484 aa23.41■■□□□ 1.34
SEC22A-205ENST00000477063 PABPN1Q86U42 306 aaKnown RBP eCLIP23.36■■□□□ 1.33
SEC22A-205ENST00000477063 SMARCA4P51532 1647 aa23.33■■□□□ 1.33
SEC22A-205ENST00000477063 MROH2BQ7Z745 1585 aa23.31■■□□□ 1.32
SEC22A-205ENST00000477063 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
SEC22A-205ENST00000477063 WIZO95785 1651 aa23.13■■□□□ 1.29
SEC22A-205ENST00000477063 SMARCA2P51531 1590 aa23.04■■□□□ 1.28
SEC22A-205ENST00000477063 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
SEC22A-205ENST00000477063 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
SEC22A-205ENST00000477063 ATAD2BQ9ULI0 1458 aa22.93■■□□□ 1.26
SEC22A-205ENST00000477063 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
SEC22A-205ENST00000477063 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
SEC22A-205ENST00000477063 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
SEC22A-205ENST00000477063 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
SEC22A-205ENST00000477063 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
SEC22A-205ENST00000477063 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.22
SEC22A-205ENST00000477063 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
SEC22A-205ENST00000477063 CFTRP13569 1480 aa22.28■■□□□ 1.16
SEC22A-205ENST00000477063 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
SEC22A-205ENST00000477063 TRIM41Q8WV44 630 aa22.19■■□□□ 1.14
SEC22A-205ENST00000477063 CADPSQ9ULU8 1353 aa22.17■■□□□ 1.14
SEC22A-205ENST00000477063 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
SEC22A-205ENST00000477063 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
SEC22A-205ENST00000477063 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
SEC22A-205ENST00000477063 BIVM-ERCC5R4GMW8 1640 aa21.99■■□□□ 1.11
SEC22A-205ENST00000477063 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
SEC22A-205ENST00000477063 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
SEC22A-205ENST00000477063 EEA1Q15075 1411 aa21.92■■□□□ 1.1
SEC22A-205ENST00000477063 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
SEC22A-205ENST00000477063 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.09
SEC22A-205ENST00000477063 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
SEC22A-205ENST00000477063 CUX1P39880 1505 aa21.83■■□□□ 1.09
SEC22A-205ENST00000477063 NESP48681 1621 aa21.82■■□□□ 1.08
SEC22A-205ENST00000477063 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
SEC22A-205ENST00000477063 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
SEC22A-205ENST00000477063 KIF21AQ7Z4S6 1674 aa21.68■■□□□ 1.06
SEC22A-205ENST00000477063 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
SEC22A-205ENST00000477063 SOGA1O94964 1423 aa21.65■■□□□ 1.06
SEC22A-205ENST00000477063 DNAJC5Q9H3Z4 198 aa21.65■■□□□ 1.06
SEC22A-205ENST00000477063 FGD5Q6ZNL6 1462 aa21.62■■□□□ 1.05
SEC22A-205ENST00000477063 KIF27Q86VH2 1401 aa21.59■■□□□ 1.05
SEC22A-205ENST00000477063 CSRNP3Q8WYN3 585 aa21.59■■□□□ 1.05
SEC22A-205ENST00000477063 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
SEC22A-205ENST00000477063 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.04
SEC22A-205ENST00000477063 KIF21BO75037 1637 aa21.56■■□□□ 1.04
SEC22A-205ENST00000477063 FAM9AQ8IZU1 332 aaPredicted RBP21.56■■□□□ 1.04
SEC22A-205ENST00000477063 POLA1P09884 1462 aaPredicted RBP21.54■■□□□ 1.04
SEC22A-205ENST00000477063 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
SEC22A-205ENST00000477063 ABCA10Q8WWZ4 1543 aa21.52■■□□□ 1.04
SEC22A-205ENST00000477063 WDR62O43379 1518 aa21.5■■□□□ 1.03
SEC22A-205ENST00000477063 GOLGA3Q08378 1498 aa21.48■■□□□ 1.03
SEC22A-205ENST00000477063 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
SEC22A-205ENST00000477063 WDR97A6NE52 1622 aa21.47■■□□□ 1.03
SEC22A-205ENST00000477063 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
SEC22A-205ENST00000477063 CUX2O14529 1486 aa21.45■■□□□ 1.02
SEC22A-205ENST00000477063 ERCC6Q03468 1493 aa21.45■■□□□ 1.02
SEC22A-205ENST00000477063 PRXQ9BXM0 1461 aa21.41■■□□□ 1.02
SEC22A-205ENST00000477063 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
SEC22A-205ENST00000477063 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
SEC22A-205ENST00000477063 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
SEC22A-205ENST00000477063 RAD54L2Q9Y4B4 1467 aa21.35■■□□□ 1.01
SEC22A-205ENST00000477063 ABCA5Q8WWZ7 1642 aa21.34■■□□□ 1.01
SEC22A-205ENST00000477063 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
SEC22A-205ENST00000477063 CUL7Q14999 1698 aa21.33■■□□□ 1
SEC22A-205ENST00000477063 IGF1RP08069 1367 aa21.32■■□□□ 1
SEC22A-205ENST00000477063 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
SEC22A-205ENST00000477063 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
SEC22A-205ENST00000477063 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
SEC22A-205ENST00000477063 UBTFP17480 764 aaKnown RBP21.22■□□□□ 0.99
SEC22A-205ENST00000477063 CEP162Q5TB80 1403 aa21.2■□□□□ 0.98
SEC22A-205ENST00000477063 PBRM1Q86U86 1689 aa21.17■□□□□ 0.98
SEC22A-205ENST00000477063 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
SEC22A-205ENST00000477063 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
SEC22A-205ENST00000477063 EHMT2Q96KQ7 1210 aa21.09■□□□□ 0.97
SEC22A-205ENST00000477063 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
SEC22A-205ENST00000477063 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
SEC22A-205ENST00000477063 CLIP1P30622 1438 aa21.07■□□□□ 0.96
SEC22A-205ENST00000477063 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
SEC22A-205ENST00000477063 AQRO60306 1485 aaKnown RBP eCLIP21.03■□□□□ 0.96
SEC22A-205ENST00000477063 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.96
SEC22A-205ENST00000477063 ZNF608Q9ULD9 1512 aaPredicted RBP21.02■□□□□ 0.96
SEC22A-205ENST00000477063 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
SEC22A-205ENST00000477063 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
SEC22A-205ENST00000477063 VPS8Q8N3P4 1428 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms