RNA–Protein interactions for RNA: ENST00000475415.5

EIF3B-211, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 2

Gene EIF3B, Length 3,745 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-211ENST00000475415 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
EIF3B-211ENST00000475415 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
EIF3B-211ENST00000475415 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
EIF3B-211ENST00000475415 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
EIF3B-211ENST00000475415 ZCCHC6Q5VYS8 1495 aaKnown RBP17.78■□□□□ 0.44
EIF3B-211ENST00000475415 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
EIF3B-211ENST00000475415 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
EIF3B-211ENST00000475415 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
EIF3B-211ENST00000475415 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.33
EIF3B-211ENST00000475415 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
EIF3B-211ENST00000475415 HRCP23327 699 aa16.99■□□□□ 0.31
EIF3B-211ENST00000475415 LOC105371045A0A1W2PR82 267 aa16.95■□□□□ 0.3
EIF3B-211ENST00000475415 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
EIF3B-211ENST00000475415 ABCC9O60706 1549 aa16.78■□□□□ 0.28
EIF3B-211ENST00000475415 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
EIF3B-211ENST00000475415 RSF1Q96T23 1441 aaPredicted RBP16.72■□□□□ 0.27
EIF3B-211ENST00000475415 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
EIF3B-211ENST00000475415 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
EIF3B-211ENST00000475415 TRIM26Q12899 539 aaPredicted RBP16.61■□□□□ 0.25
EIF3B-211ENST00000475415 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
EIF3B-211ENST00000475415 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
EIF3B-211ENST00000475415 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
EIF3B-211ENST00000475415 NACADO15069 1562 aa16.44■□□□□ 0.22
EIF3B-211ENST00000475415 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
EIF3B-211ENST00000475415 WIZO95785 1651 aa16.3■□□□□ 0.2
EIF3B-211ENST00000475415 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.19
EIF3B-211ENST00000475415 BAZ1AQ9NRL2 1556 aaPredicted RBP16.15■□□□□ 0.18
EIF3B-211ENST00000475415 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
EIF3B-211ENST00000475415 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
EIF3B-211ENST00000475415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.15
EIF3B-211ENST00000475415 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
EIF3B-211ENST00000475415 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
EIF3B-211ENST00000475415 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
EIF3B-211ENST00000475415 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
EIF3B-211ENST00000475415 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
EIF3B-211ENST00000475415 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.155e-7■■■□□ 16.4
EIF3B-211ENST00000475415 SMARCA2P51531 1590 aa15.93■□□□□ 0.14
EIF3B-211ENST00000475415 UBTFP17480 764 aaKnown RBP15.92■□□□□ 0.14
EIF3B-211ENST00000475415 SOGA1O94964 1423 aa15.91■□□□□ 0.14
EIF3B-211ENST00000475415 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
EIF3B-211ENST00000475415 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
EIF3B-211ENST00000475415 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
EIF3B-211ENST00000475415 RUSC2Q8N2Y8 1516 aa15.82■□□□□ 0.12
EIF3B-211ENST00000475415 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
EIF3B-211ENST00000475415 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
EIF3B-211ENST00000475415 EEA1Q15075 1411 aa15.76■□□□□ 0.11
EIF3B-211ENST00000475415 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
EIF3B-211ENST00000475415 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
EIF3B-211ENST00000475415 BICRAQ9NZM4 1560 aa15.7■□□□□ 0.1
EIF3B-211ENST00000475415 RANGAP1P46060 587 aaPredicted RBP15.7■□□□□ 0.1
EIF3B-211ENST00000475415 DIEXFQ68CQ4 756 aaKnown RBP15.68■□□□□ 0.1
EIF3B-211ENST00000475415 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
EIF3B-211ENST00000475415 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
EIF3B-211ENST00000475415 SYNJ1O43426 1573 aa15.61■□□□□ 0.09
EIF3B-211ENST00000475415 APLP2Q06481 763 aa15.6■□□□□ 0.09
EIF3B-211ENST00000475415 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
EIF3B-211ENST00000475415 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
EIF3B-211ENST00000475415 PEG3Q9GZU2 1588 aa15.58■□□□□ 0.09
EIF3B-211ENST00000475415 CLIP1P30622 1438 aa15.58■□□□□ 0.08
EIF3B-211ENST00000475415 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
EIF3B-211ENST00000475415 NEUROD1Q13562 356 aa15.56■□□□□ 0.08
EIF3B-211ENST00000475415 CENPBP07199 599 aaPredicted RBP15.52■□□□□ 0.07
EIF3B-211ENST00000475415 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
EIF3B-211ENST00000475415 RAPGEF2Q9Y4G8 1499 aa15.5■□□□□ 0.07
EIF3B-211ENST00000475415 KIF21BO75037 1637 aa15.5■□□□□ 0.07
EIF3B-211ENST00000475415 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
EIF3B-211ENST00000475415 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
EIF3B-211ENST00000475415 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
EIF3B-211ENST00000475415 YTHDC1Q96MU7 727 aaKnown RBP15.43■□□□□ 0.06
EIF3B-211ENST00000475415 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
EIF3B-211ENST00000475415 MIER1Q8N108 512 aa15.32■□□□□ 0.04
EIF3B-211ENST00000475415 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
EIF3B-211ENST00000475415 PRXQ9BXM0 1461 aa15.27■□□□□ 0.03
EIF3B-211ENST00000475415 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
EIF3B-211ENST00000475415 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
EIF3B-211ENST00000475415 ARAP1Q96P48 1450 aa15.24■□□□□ 0.03
EIF3B-211ENST00000475415 ITGAEP38570 1179 aa15.24■□□□□ 0.03
EIF3B-211ENST00000475415 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
EIF3B-211ENST00000475415 CUX1P39880 1505 aa15.24■□□□□ 0.03
EIF3B-211ENST00000475415 ERICH3Q5RHP9 1530 aa15.24■□□□□ 0.03
EIF3B-211ENST00000475415 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
EIF3B-211ENST00000475415 DHX57Q6P158 1386 aaKnown RBP15.18■□□□□ 0.02
EIF3B-211ENST00000475415 CFTRP13569 1480 aa15.16■□□□□ 0.02
EIF3B-211ENST00000475415 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
EIF3B-211ENST00000475415 CUX2O14529 1486 aa15.12■□□□□ 0.01
EIF3B-211ENST00000475415 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
EIF3B-211ENST00000475415 CCNB3Q8WWL7 1395 aa15.11■□□□□ 0.01
EIF3B-211ENST00000475415 ATP1B4Q9UN42 357 aaPredicted RBP15.1■□□□□ 0.01
EIF3B-211ENST00000475415 RRBP1Q9P2E9 1410 aaKnown RBP15.08■□□□□ 0.01
EIF3B-211ENST00000475415 P3H3Q8IVL6 736 aa15.06■□□□□ 0
EIF3B-211ENST00000475415 IGF1RP08069 1367 aa15.06■□□□□ 0
EIF3B-211ENST00000475415 CARMIL1Q5VZK9 1371 aa15.04■□□□□ -0
EIF3B-211ENST00000475415 CADPSQ9ULU8 1353 aa15.03■□□□□ -0
EIF3B-211ENST00000475415 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
EIF3B-211ENST00000475415 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
EIF3B-211ENST00000475415 RAB3GAP2Q9H2M9 1393 aa14.99□□□□□ -0.01
EIF3B-211ENST00000475415 TIAM1Q13009 1591 aa14.94□□□□□ -0.02
EIF3B-211ENST00000475415 PHLDB1Q86UU1 1377 aa14.92□□□□□ -0.02
EIF3B-211ENST00000475415 LRRC9Q6ZRR7 1453 aa14.91□□□□□ -0.02
EIF3B-211ENST00000475415 SETD5Q9C0A6 1442 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms