RNA–Protein interactions for RNA: ENST00000347708.4

HGH1-201, Transcript of HGH1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HGH1, Length 2,531 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGH1-201ENST00000347708 NISCHQ9Y2I1 1504 aa42.5■■■■■ 4.39
HGH1-201ENST00000347708 CCDC180Q9P1Z9 1646 aa36.2■■■■□ 3.39
HGH1-201ENST00000347708 SHROOM4Q9ULL8 1493 aa36.18■■■■□ 3.38
HGH1-201ENST00000347708 ZCCHC6Q5VYS8 1495 aaKnown RBP35.9■■■■□ 3.34
HGH1-201ENST00000347708 SUPT5HO00267 1087 aaKnown RBP35.46■■■■□ 3.27
HGH1-201ENST00000347708 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.24
HGH1-201ENST00000347708 DCAF1Q9Y4B6 1507 aa34.9■■■■□ 3.18
HGH1-201ENST00000347708 CHIC1Q5VXU3 224 aa34.42■■■■□ 3.1
HGH1-201ENST00000347708 MYO15BQ96JP2 1530 aa34.28■■■■□ 3.08
HGH1-201ENST00000347708 ABCC9O60706 1549 aa33.97■■■■□ 3.03
HGH1-201ENST00000347708 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
HGH1-201ENST00000347708 RSF1Q96T23 1441 aaPredicted RBP33.56■■■□□ 2.96
HGH1-201ENST00000347708 NACADO15069 1562 aa33.55■■■□□ 2.96
HGH1-201ENST00000347708 LOC105371045A0A1W2PR82 267 aa33.43■■■□□ 2.94
HGH1-201ENST00000347708 PCGF6Q9BYE7 350 aa33.32■■■□□ 2.92
HGH1-201ENST00000347708 HRCP23327 699 aa33.24■■■□□ 2.91
HGH1-201ENST00000347708 RB1CC1Q8TDY2 1594 aa33.21■■■□□ 2.91
HGH1-201ENST00000347708 CECR2Q9BXF3 1484 aa33.16■■■□□ 2.9
HGH1-201ENST00000347708 MROH2BQ7Z745 1585 aa33.02■■■□□ 2.88
HGH1-201ENST00000347708 TRIM41Q8WV44 630 aa33.01■■■□□ 2.88
HGH1-201ENST00000347708 WIZO95785 1651 aa32.82■■■□□ 2.85
HGH1-201ENST00000347708 FAM9AQ8IZU1 332 aaPredicted RBP32.78■■■□□ 2.84
HGH1-201ENST00000347708 TRIM26Q12899 539 aaPredicted RBP32.66■■■□□ 2.82
HGH1-201ENST00000347708 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
HGH1-201ENST00000347708 BAZ1AQ9NRL2 1556 aaPredicted RBP32.63■■■□□ 2.81
HGH1-201ENST00000347708 PPARGC1BQ86YN6 1023 aaKnown RBP32.6■■■□□ 2.81
HGH1-201ENST00000347708 EHMT2Q96KQ7 1210 aa32.52■■■□□ 2.8
HGH1-201ENST00000347708 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
HGH1-201ENST00000347708 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
HGH1-201ENST00000347708 TOP2AP11388 1531 aaKnown RBP32.3■■■□□ 2.76
HGH1-201ENST00000347708 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
HGH1-201ENST00000347708 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
HGH1-201ENST00000347708 CCDC88BA6NC98 1476 aa32.19■■■□□ 2.74
HGH1-201ENST00000347708 SMARCA2P51531 1590 aa32.12■■■□□ 2.73
HGH1-201ENST00000347708 ABCC8Q09428 1581 aa32.08■■■□□ 2.73
HGH1-201ENST00000347708 ZEB1P37275 1124 aaPredicted RBP31.88■■■□□ 2.69
HGH1-201ENST00000347708 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
HGH1-201ENST00000347708 SOGA1O94964 1423 aa31.76■■■□□ 2.68
HGH1-201ENST00000347708 ATAD2BQ9ULI0 1458 aa31.64■■■□□ 2.65
HGH1-201ENST00000347708 RUSC2Q8N2Y8 1516 aa31.62■■■□□ 2.65
HGH1-201ENST00000347708 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
HGH1-201ENST00000347708 CSRNP3Q8WYN3 585 aa31.57■■■□□ 2.64
HGH1-201ENST00000347708 EEA1Q15075 1411 aa31.54■■■□□ 2.64
HGH1-201ENST00000347708 WRNQ14191 1432 aaPredicted RBP eCLIP31.52■■■□□ 2.64
HGH1-201ENST00000347708 TNIKQ9UKE5 1360 aa31.51■■■□□ 2.64
HGH1-201ENST00000347708 BAZ1BQ9UIG0 1483 aaKnown RBP31.51■■■□□ 2.63
HGH1-201ENST00000347708 UBTFP17480 764 aaKnown RBP31.47■■■□□ 2.63
HGH1-201ENST00000347708 TTBK1Q5TCY1 1321 aaPredicted RBP31.46■■■□□ 2.63
HGH1-201ENST00000347708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.42■■■□□ 2.62
HGH1-201ENST00000347708 SYNJ1O43426 1573 aa31.38■■■□□ 2.61
HGH1-201ENST00000347708 GOLGA3Q08378 1498 aa31.35■■■□□ 2.61
HGH1-201ENST00000347708 CCER1Q8TC90 406 aaPredicted RBP31.31■■■□□ 2.6
HGH1-201ENST00000347708 CEP164Q9UPV0 1460 aa31.18■■■□□ 2.58
HGH1-201ENST00000347708 KIF21BO75037 1637 aa31.13■■■□□ 2.57
HGH1-201ENST00000347708 NCAPD3P42695 1498 aa31.08■■■□□ 2.57
HGH1-201ENST00000347708 HMGXB3Q12766 1538 aa31.02■■■□□ 2.56
HGH1-201ENST00000347708 CLIP1P30622 1438 aa31.01■■■□□ 2.55
HGH1-201ENST00000347708 TOP2BQ02880 1626 aa30.99■■■□□ 2.55
HGH1-201ENST00000347708 RAPGEF2Q9Y4G8 1499 aa30.99■■■□□ 2.55
HGH1-201ENST00000347708 RANGAP1P46060 587 aaPredicted RBP30.9■■■□□ 2.54
HGH1-201ENST00000347708 BIVM-ERCC5R4GMW8 1640 aa30.87■■■□□ 2.53
HGH1-201ENST00000347708 PELP1Q8IZL8 1130 aaKnown RBP30.87■■■□□ 2.53
HGH1-201ENST00000347708 VPS8Q8N3P4 1428 aa30.85■■■□□ 2.53
HGH1-201ENST00000347708 SCAF1Q9H7N4 1312 aaKnown RBP30.76■■■□□ 2.51
HGH1-201ENST00000347708 CFTRP13569 1480 aa30.75■■■□□ 2.51
HGH1-201ENST00000347708 CUX1P39880 1505 aa30.75■■■□□ 2.51
HGH1-201ENST00000347708 HNRNPUL2Q1KMD3 747 aaKnown RBP30.74■■■□□ 2.51
HGH1-201ENST00000347708 APLP2Q06481 763 aa30.74■■■□□ 2.51
HGH1-201ENST00000347708 PRXQ9BXM0 1461 aa30.66■■■□□ 2.5
HGH1-201ENST00000347708 CC2D2AQ9P2K1 1620 aa30.65■■■□□ 2.5
HGH1-201ENST00000347708 DIEXFQ68CQ4 756 aaKnown RBP30.65■■■□□ 2.5
HGH1-201ENST00000347708 ERICH3Q5RHP9 1530 aa30.64■■■□□ 2.5
HGH1-201ENST00000347708 KIF27Q86VH2 1401 aa30.56■■■□□ 2.48
HGH1-201ENST00000347708 ARAP1Q96P48 1450 aa30.51■■■□□ 2.47
HGH1-201ENST00000347708 CADPSQ9ULU8 1353 aa30.45■■■□□ 2.47
HGH1-201ENST00000347708 ZNF316A6NFI3 1004 aaPredicted RBP30.43■■■□□ 2.46
HGH1-201ENST00000347708 PRDM2Q13029 1718 aa30.41■■■□□ 2.46
HGH1-201ENST00000347708 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
HGH1-201ENST00000347708 ACIN1Q9UKV3 1341 aaKnown RBP30.32■■■□□ 2.44
HGH1-201ENST00000347708 NEUROD1Q13562 356 aa30.32■■■□□ 2.44
HGH1-201ENST00000347708 CUX2O14529 1486 aa30.3■■■□□ 2.44
HGH1-201ENST00000347708 IGF1RP08069 1367 aa30.28■■■□□ 2.44
HGH1-201ENST00000347708 ARHGAP35Q9NRY4 1499 aa30.26■■■□□ 2.43
HGH1-201ENST00000347708 FGD5Q6ZNL6 1462 aa30.22■■■□□ 2.43
HGH1-201ENST00000347708 CENPBP07199 599 aaPredicted RBP30.16■■■□□ 2.42
HGH1-201ENST00000347708 FANCD2Q9BXW9 1451 aa30.13■■■□□ 2.41
HGH1-201ENST00000347708 CARMIL1Q5VZK9 1371 aa30.13■■■□□ 2.41
HGH1-201ENST00000347708 RRBP1Q9P2E9 1410 aaKnown RBP30.11■■■□□ 2.41
HGH1-201ENST00000347708 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
HGH1-201ENST00000347708 DNAJC5BQ9UF47 199 aa30.07■■■□□ 2.41
HGH1-201ENST00000347708 NESP48681 1621 aa30.04■■■□□ 2.4
HGH1-201ENST00000347708 CCNB3Q8WWL7 1395 aa30.02■■■□□ 2.4
HGH1-201ENST00000347708 CLSPNQ9HAW4 1339 aa30.01■■■□□ 2.4
HGH1-201ENST00000347708 MIER1Q8N108 512 aa30.01■■■□□ 2.39
HGH1-201ENST00000347708 GTF3C3Q9Y5Q9 886 aa29.99■■■□□ 2.39
HGH1-201ENST00000347708 ITGAEP38570 1179 aa29.97■■■□□ 2.39
HGH1-201ENST00000347708 RAD54L2Q9Y4B4 1467 aa29.95■■■□□ 2.39
HGH1-201ENST00000347708 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
HGH1-201ENST00000347708 YTHDC1Q96MU7 727 aaKnown RBP29.95■■■□□ 2.38
HGH1-201ENST00000347708 TOPBP1Q92547 1522 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms