Protein–RNA interactions for Protein: Q9C0B1

FTO, Alpha-ketoglutarate-dependent dioxygenase FTO, humanhuman

Known RBP eCLIP

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FTOQ9C0B1 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)17.11■□□□□ 0.331e-6■■□□□ 11.8
FTOQ9C0B1 STRN4-203ENST00000435164 1551 ntTSL 216.72■□□□□ 0.271e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.251e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.221e-6■■□□□ 11.8
FTOQ9C0B1 STRN4-214ENST00000597021 582 ntTSL 316.18■□□□□ 0.181e-6■■□□□ 11.8
FTOQ9C0B1 PTPRS-203ENST00000586065 388 ntTSL 516.13■□□□□ 0.171e-6■■□□□ 11.8
FTOQ9C0B1 STRN4-220ENST00000600710 565 ntTSL 515.91■□□□□ 0.141e-6■■□□□ 11.8
FTOQ9C0B1 STRN4-209ENST00000594704 913 ntTSL 515.86■□□□□ 0.131e-6■■□□□ 11.8
FTOQ9C0B1 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.121e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.081e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-211ENST00000530790 561 ntTSL 215.25■□□□□ 0.031e-6■■□□□ 11.8
FTOQ9C0B1 STRN4-212ENST00000596012 560 ntTSL 415.16■□□□□ 0.021e-6■■□□□ 11.8
FTOQ9C0B1 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.011e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC15□□□□□ -0.011e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.011e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC15□□□□□ -0.011e-6■■□□□ 11.8
FTOQ9C0B1 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC14.91□□□□□ -0.021e-6■■□□□ 11.8
FTOQ9C0B1 GDI1-201ENST00000415109 560 ntTSL 414.9□□□□□ -0.021e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-216ENST00000533806 650 ntTSL 314.59□□□□□ -0.071e-6■■□□□ 11.8
FTOQ9C0B1 SSBP3-210ENST00000525990 701 ntTSL 213.88□□□□□ -0.191e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-214ENST00000508760 547 ntTSL 1 (best)13.79□□□□□ -0.21e-6■■□□□ 11.8
FTOQ9C0B1 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC13.64□□□□□ -0.231e-6■■□□□ 11.8
FTOQ9C0B1 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC13.5□□□□□ -0.251e-6■■□□□ 11.8
FTOQ9C0B1 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC13.5□□□□□ -0.251e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-214ENST00000531032 573 ntTSL 1 (best)13.19□□□□□ -0.31e-6■■□□□ 11.8
FTOQ9C0B1 IQSEC1-205ENST00000618604 3744 ntTSL 1 (best) BASIC13.01□□□□□ -0.331e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC12.22□□□□□ -0.451e-6■■□□□ 11.8
FTOQ9C0B1 VPS28-204ENST00000526054 892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.541e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC10.38□□□□□ -0.751e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-204ENST00000563171 790 ntTSL 58.12□□□□□ -1.111e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-213ENST00000570272 570 ntTSL 48.04□□□□□ -1.121e-6■■□□□ 11.8
FTOQ9C0B1 DNAAF4-CCPG1-202ENST00000568310 1293 ntTSL 27.78□□□□□ -1.161e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-211ENST00000568808 2866 ntTSL 1 (best)7.17□□□□□ -1.261e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC7.03□□□□□ -1.281e-6■■□□□ 11.8
FTOQ9C0B1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.88□□□□□ -1.471e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-208ENST00000502892 498 ntTSL 1 (best)5.31□□□□□ -1.561e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.721e-6■■□□□ 11.8
FTOQ9C0B1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.761e-6■■□□□ 11.8
FTOQ9C0B1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.931e-6■■□□□ 11.8
FTOQ9C0B1 SLC31A1-202ENST00000496650 475 ntTSL 210.4□□□□□ -0.743e-6■■□□□ 11.8
FTOQ9C0B1 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.863e-6■■□□□ 11.8
FTOQ9C0B1 KCTD9-205ENST00000519665 2128 ntTSL 521.47■■□□□ 1.035e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-207ENST00000521458 541 ntTSL 221.32■■□□□ 15e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-203ENST00000518067 849 ntTSL 520.8■□□□□ 0.925e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-204ENST00000518997 679 ntTSL 320.7■□□□□ 0.95e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-208ENST00000522493 530 ntTSL 420.7■□□□□ 0.95e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-209ENST00000523140 840 ntTSL 319.18■□□□□ 0.665e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-211ENST00000524217 400 ntTSL 217.12■□□□□ 0.335e-8■■□□□ 11.8
FTOQ9C0B1 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.25e-8■■□□□ 11.8
FTOQ9C0B1 EIF4G1-225ENST00000448284 677 ntTSL 515.33■□□□□ 0.043e-6■■□□□ 11.8
FTOQ9C0B1 PDIA4-202ENST00000413966 550 ntTSL 221.32■■□□□ 19e-18■■□□□ 11.8
FTOQ9C0B1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.469e-18■■□□□ 11.8
FTOQ9C0B1 RPL13A-206ENST00000476268 1623 ntTSL 320.86■□□□□ 0.931e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-208ENST00000477613 796 ntTSL 519.93■□□□□ 0.781e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-209ENST00000479992 850 ntTSL 317.94■□□□□ 0.461e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-202ENST00000467825 660 ntTSL 517.21■□□□□ 0.351e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)17.18■□□□□ 0.341e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.341e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-212ENST00000488946 2312 ntTSL 216.41■□□□□ 0.221e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-210ENST00000484279 794 ntTSL 515.65■□□□□ 0.11e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.65■□□□□ 0.11e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-205ENST00000474171 521 ntTSL 212.91□□□□□ -0.341e-12■■□□□ 11.7
FTOQ9C0B1 RPL13A-207ENST00000476300 619 ntTSL 311.74□□□□□ -0.531e-12■■□□□ 11.7
FTOQ9C0B1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.089e-7■■□□□ 11.7
FTOQ9C0B1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.023e-6■■□□□ 11.7
FTOQ9C0B1 PPM1G-202ENST00000472077 3752 ntTSL 210.94□□□□□ -0.663e-6■■□□□ 11.7
FTOQ9C0B1 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.372e-9■■□□□ 11.7
FTOQ9C0B1 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.642e-9■■□□□ 11.7
FTOQ9C0B1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.521e-18■■□□□ 11.7
FTOQ9C0B1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.851e-18■■□□□ 11.7
FTOQ9C0B1 SEC61G-205ENST00000460484 1227 ntTSL 1 (best)10.37□□□□□ -0.751e-18■■□□□ 11.7
FTOQ9C0B1 SEC61G-207ENST00000480303 661 ntTSL 1 (best)10.01□□□□□ -0.811e-18■■□□□ 11.7
FTOQ9C0B1 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.981e-18■■□□□ 11.7
FTOQ9C0B1 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.061e-18■■□□□ 11.7
FTOQ9C0B1 SEC61G-206ENST00000461536 437 ntTSL 24.91□□□□□ -1.621e-18■■□□□ 11.7
FTOQ9C0B1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.873e-7■■□□□ 11.7
FTOQ9C0B1 SDF4-205ENST00000465727 2095 ntTSL 222.96■■□□□ 1.273e-7■■□□□ 11.7
FTOQ9C0B1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.913e-7■■□□□ 11.7
FTOQ9C0B1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.342e-6■■□□□ 11.6
FTOQ9C0B1 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.242e-6■■□□□ 11.6
FTOQ9C0B1 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.532e-6■■□□□ 11.6
FTOQ9C0B1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.2■■■□□ 2.911e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.79■■■□□ 2.521e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.99■■■□□ 2.231e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.841e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.96■□□□□ 0.471e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.34■□□□□ 0.371e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-203ENST00000349299 596 ntTSL 2 BASIC10.92□□□□□ -0.661e-16■■□□□ 11.6
FTOQ9C0B1 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.06□□□□□ -1.281e-16■■□□□ 11.6
FTOQ9C0B1 ACTB-211ENST00000480301 657 ntTSL 1 (best)23.64■■□□□ 1.371e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-212ENST00000484841 1032 ntTSL 523.36■■□□□ 1.331e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-210ENST00000477812 820 ntTSL 222.59■■□□□ 1.211e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.931e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-207ENST00000462494 2245 ntTSL 519.92■□□□□ 0.781e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-205ENST00000432588 568 ntTSL 418.82■□□□□ 0.61e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-202ENST00000414620 561 ntTSL 417.97■□□□□ 0.471e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-206ENST00000443528 569 ntTSL 417.69■□□□□ 0.421e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-204ENST00000425660 1845 ntTSL 1 (best)17.58■□□□□ 0.41e-22■■□□□ 11.6
FTOQ9C0B1 ACTB-209ENST00000473257 556 ntTSL 313.16□□□□□ -0.31e-22■■□□□ 11.6
FTOQ9C0B1 NEU1-208ENST00000491768 1875 ntTSL 522.5■■□□□ 1.196e-7■■□□□ 11.6
Retrieved 100 of 7,068 protein–RNA pairs in 114.4 ms