RNA–Protein interactions for RNA: ENST00000308153.8

H2AFV-202, Transcript of H2A histone family member V, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene H2AFV, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-202ENST00000308153 NISCHQ9Y2I1 1504 aa71.83■■■■■ 9.09
H2AFV-202ENST00000308153 CCDC180Q9P1Z9 1646 aa64.22■■■■■ 7.87
H2AFV-202ENST00000308153 ABCC9O60706 1549 aa63.72■■■■■ 7.79
H2AFV-202ENST00000308153 RB1CC1Q8TDY2 1594 aa60.87■■■■■ 7.33
H2AFV-202ENST00000308153 NACADO15069 1562 aa60.59■■■■■ 7.29
H2AFV-202ENST00000308153 DCAF8L2P0C7V8 631 aa60.27■■■■■ 7.24
H2AFV-202ENST00000308153 MYO15BQ96JP2 1530 aa59.97■■■■■ 7.19
H2AFV-202ENST00000308153 ZCCHC6Q5VYS8 1495 aaKnown RBP59.66■■■■■ 7.14
H2AFV-202ENST00000308153 UNC13AQ9UPW8 1703 aa59.52■■■■■ 7.12
H2AFV-202ENST00000308153 PABPN1Q86U42 306 aaKnown RBP eCLIP59.39■■■■■ 7.1
H2AFV-202ENST00000308153 DCAF1Q9Y4B6 1507 aa59.39■■■■■ 7.1
H2AFV-202ENST00000308153 DNAJC5BQ9UF47 199 aa59.37■■■■■ 7.09
H2AFV-202ENST00000308153 BICRAQ9NZM4 1560 aa59.15■■■■■ 7.06
H2AFV-202ENST00000308153 SCRIBQ14160 1630 aa58.54■■■■■ 6.96
H2AFV-202ENST00000308153 SHROOM4Q9ULL8 1493 aa58.38■■■■■ 6.94
H2AFV-202ENST00000308153 EIF4G1Q04637 1599 aaKnown RBP57.62■■■■■ 6.81
H2AFV-202ENST00000308153 CC2D2AQ9P2K1 1620 aa57.61■■■■■ 6.81
H2AFV-202ENST00000308153 CECR2Q9BXF3 1484 aa57.35■■■■■ 6.77
H2AFV-202ENST00000308153 NCAPD3P42695 1498 aa55.96■■■■■ 6.55
H2AFV-202ENST00000308153 SMARCA4P51532 1647 aa55.93■■■■■ 6.54
H2AFV-202ENST00000308153 ATAD2BQ9ULI0 1458 aa55.86■■■■■ 6.53
H2AFV-202ENST00000308153 BAZ1AQ9NRL2 1556 aaPredicted RBP55.7■■■■■ 6.51
H2AFV-202ENST00000308153 SMARCA2P51531 1590 aa55.7■■■■■ 6.51
H2AFV-202ENST00000308153 HMGXB3Q12766 1538 aa55.59■■■■■ 6.49
H2AFV-202ENST00000308153 PEG3Q9GZU2 1588 aa55.41■■■■■ 6.46
H2AFV-202ENST00000308153 MROH2BQ7Z745 1585 aa55.36■■■■■ 6.45
H2AFV-202ENST00000308153 BAZ1BQ9UIG0 1483 aaKnown RBP55.31■■■■■ 6.45
H2AFV-202ENST00000308153 ERCC6Q03468 1493 aa54.94■■■■■ 6.39
H2AFV-202ENST00000308153 NESP48681 1621 aa54.92■■■■■ 6.38
H2AFV-202ENST00000308153 CUX2O14529 1486 aa54.73■■■■■ 6.35
H2AFV-202ENST00000308153 WIZO95785 1651 aa54.7■■■■■ 6.35
H2AFV-202ENST00000308153 LAMC3Q9Y6N6 1575 aa54.59■■■■■ 6.33
H2AFV-202ENST00000308153 RSF1Q96T23 1441 aaPredicted RBP54.4■■■■■ 6.3
H2AFV-202ENST00000308153 THOC2Q8NI27 1593 aaKnown RBP54.28■■■■■ 6.28
H2AFV-202ENST00000308153 CADPSQ9ULU8 1353 aa54.26■■■■■ 6.28
H2AFV-202ENST00000308153 PDS5BQ9NTI5 1447 aa54.24■■■■■ 6.27
H2AFV-202ENST00000308153 KIF21AQ7Z4S6 1674 aa54.2■■■■■ 6.27
H2AFV-202ENST00000308153 DNAJC5Q9H3Z4 198 aa54.1■■■■■ 6.25
H2AFV-202ENST00000308153 TOP2AP11388 1531 aaKnown RBP54.06■■■■■ 6.24
H2AFV-202ENST00000308153 CFTRP13569 1480 aa53.77■■■■■ 6.2
H2AFV-202ENST00000308153 MRC2Q9UBG0 1479 aa53.77■■■■■ 6.2
H2AFV-202ENST00000308153 CEP164Q9UPV0 1460 aa53.65■■■■■ 6.18
H2AFV-202ENST00000308153 WDR62O43379 1518 aa53.64■■■■■ 6.18
H2AFV-202ENST00000308153 FANCD2Q9BXW9 1451 aa53.64■■■■■ 6.18
H2AFV-202ENST00000308153 CCDC88BA6NC98 1476 aa53.44■■■■■ 6.15
H2AFV-202ENST00000308153 PRDM2Q13029 1718 aa53.23■■■■■ 6.11
H2AFV-202ENST00000308153 URB2Q14146 1524 aaKnown RBP53.2■■■■■ 6.11
H2AFV-202ENST00000308153 TOPBP1Q92547 1522 aa52.69■■■■■ 6.03
H2AFV-202ENST00000308153 ABCC8Q09428 1581 aa52.57■■■■■ 6.01
H2AFV-202ENST00000308153 IFT140Q96RY7 1462 aa52.56■■■■■ 6
H2AFV-202ENST00000308153 DNMBPQ6XZF7 1577 aa52.54■■■■■ 6
H2AFV-202ENST00000308153 ZNF608Q9ULD9 1512 aaPredicted RBP52.45■■■■■ 5.99
H2AFV-202ENST00000308153 SUPT5HO00267 1087 aaKnown RBP52.26■■■■■ 5.96
H2AFV-202ENST00000308153 OSCARQ8IYS5 282 aa52.26■■■■■ 5.96
H2AFV-202ENST00000308153 TARBP1Q13395 1621 aaKnown RBP52.21■■■■■ 5.95
H2AFV-202ENST00000308153 POLA1P09884 1462 aaPredicted RBP52.2■■■■■ 5.95
H2AFV-202ENST00000308153 EIF4G3O43432 1585 aaKnown RBP52.18■■■■■ 5.94
H2AFV-202ENST00000308153 AQRO60306 1485 aaKnown RBP eCLIP52.02■■■■■ 5.922e-7■■■■■ 32.8
H2AFV-202ENST00000308153 CUX1P39880 1505 aa51.99■■■■■ 5.91
H2AFV-202ENST00000308153 RAD54L2Q9Y4B4 1467 aa51.99■■■■■ 5.91
H2AFV-202ENST00000308153 FGD5Q6ZNL6 1462 aa51.93■■■■■ 5.9
H2AFV-202ENST00000308153 SOGA1O94964 1423 aa51.92■■■■■ 5.9
H2AFV-202ENST00000308153 TRIM41Q8WV44 630 aa51.89■■■■■ 5.9
H2AFV-202ENST00000308153 TDRD9Q8NDG6 1382 aaKnown RBP51.77■■■■■ 5.88
H2AFV-202ENST00000308153 WDR97A6NE52 1622 aa51.69■■■■■ 5.87
H2AFV-202ENST00000308153 CHD1O14646 1710 aa51.67■■■■■ 5.86
H2AFV-202ENST00000308153 RIMBP3CA6NJZ7 1639 aa51.57■■■■■ 5.85
H2AFV-202ENST00000308153 RIMBP3BA6NNM3 1639 aa51.57■■■■■ 5.85
H2AFV-202ENST00000308153 RIMBP3Q9UFD9 1639 aa51.57■■■■■ 5.85
H2AFV-202ENST00000308153 SNAPC4Q5SXM2 1469 aa51.51■■■■■ 5.84
H2AFV-202ENST00000308153 FBLN2P98095 1184 aa51.49■■■■■ 5.83
H2AFV-202ENST00000308153 ARHGEF11O15085 1522 aa51.48■■■■■ 5.83
H2AFV-202ENST00000308153 GRIN2BQ13224 1484 aa51.43■■■■■ 5.82
H2AFV-202ENST00000308153 MAGI1Q96QZ7 1491 aaPredicted RBP51.4■■■■■ 5.82
H2AFV-202ENST00000308153 ABCA10Q8WWZ4 1543 aa51.38■■■■■ 5.82
H2AFV-202ENST00000308153 GAPVD1Q14C86 1478 aa51.33■■■■■ 5.81
H2AFV-202ENST00000308153 BIVM-ERCC5R4GMW8 1640 aa51.28■■■■■ 5.8
H2AFV-202ENST00000308153 WRNQ14191 1432 aaPredicted RBP eCLIP51.28■■■■■ 5.8
H2AFV-202ENST00000308153 TOP2BQ02880 1626 aa51.27■■■■■ 5.8
H2AFV-202ENST00000308153 ABCA5Q8WWZ7 1642 aa51.27■■■■■ 5.8
H2AFV-202ENST00000308153 PBRM1Q86U86 1689 aa51.26■■■■■ 5.8
H2AFV-202ENST00000308153 SYNJ1O43426 1573 aa51.24■■■■■ 5.79
H2AFV-202ENST00000308153 CHMP7Q8WUX9 453 aaPredicted RBP51.22■■■■■ 5.79
H2AFV-202ENST00000308153 SYNJ2O15056 1496 aa51.22■■■■■ 5.79
H2AFV-202ENST00000308153 CLASP1Q7Z460 1538 aa51.14■■■■■ 5.78
H2AFV-202ENST00000308153 ARAP1Q96P48 1450 aa51.03■■■■■ 5.76
H2AFV-202ENST00000308153 CYB5RLQ6IPT4 315 aa51■■■■■ 5.75
H2AFV-202ENST00000308153 ADAMTS12P58397 1594 aa50.84■■■■■ 5.73
H2AFV-202ENST00000308153 GRIN2AQ12879 1464 aa50.79■■■■■ 5.72
H2AFV-202ENST00000308153 ERICH3Q5RHP9 1530 aa50.74■■■■■ 5.71
H2AFV-202ENST00000308153 FHAD1B1AJZ9 1412 aa50.7■■■■■ 5.71
H2AFV-202ENST00000308153 NUP160Q12769 1436 aa50.63■■■■■ 5.7
H2AFV-202ENST00000308153 CEP170Q5SW79 1584 aa50.6■■■■■ 5.69
H2AFV-202ENST00000308153 ERCC6L2Q5T890 1561 aa50.38■■■■■ 5.66
H2AFV-202ENST00000308153 SHROOM2Q13796 1616 aa50.34■■■■■ 5.65
H2AFV-202ENST00000308153 KIF27Q86VH2 1401 aa50.26■■■■■ 5.64
H2AFV-202ENST00000308153 TRHP20396 242 aaPredicted RBP50.22■■■■■ 5.63
H2AFV-202ENST00000308153 IGF1RP08069 1367 aa50.21■■■■■ 5.63
H2AFV-202ENST00000308153 RUSC2Q8N2Y8 1516 aa50.12■■■■■ 5.61
H2AFV-202ENST00000308153 CUL7Q14999 1698 aa50.08■■■■■ 5.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms