RNA–Protein interactions for RNA: ENST00000435164.6

STRN4-203, Transcript of striatin 4, humanhuman

TSL 2

Gene STRN4, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-203ENST00000435164 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
STRN4-203ENST00000435164 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
STRN4-203ENST00000435164 ABCC9O60706 1549 aa28.18■■■□□ 2.1
STRN4-203ENST00000435164 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
STRN4-203ENST00000435164 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
STRN4-203ENST00000435164 NACADO15069 1562 aa27.37■■□□□ 1.97
STRN4-203ENST00000435164 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
STRN4-203ENST00000435164 RB1CC1Q8TDY2 1594 aa27.33■■□□□ 1.97
STRN4-203ENST00000435164 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
STRN4-203ENST00000435164 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
STRN4-203ENST00000435164 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
STRN4-203ENST00000435164 BICRAQ9NZM4 1560 aa26.42■■□□□ 1.82
STRN4-203ENST00000435164 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
STRN4-203ENST00000435164 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
STRN4-203ENST00000435164 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
STRN4-203ENST00000435164 CECR2Q9BXF3 1484 aa25.65■■□□□ 1.7
STRN4-203ENST00000435164 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
STRN4-203ENST00000435164 SMARCA4P51532 1647 aa25.57■■□□□ 1.68
STRN4-203ENST00000435164 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
STRN4-203ENST00000435164 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
STRN4-203ENST00000435164 DNAJC5BQ9UF47 199 aa25.42■■□□□ 1.66
STRN4-203ENST00000435164 SMARCA2P51531 1590 aa25.33■■□□□ 1.65
STRN4-203ENST00000435164 ATAD2BQ9ULI0 1458 aa25.29■■□□□ 1.64
STRN4-203ENST00000435164 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
STRN4-203ENST00000435164 RSF1Q96T23 1441 aaPredicted RBP25.28■■□□□ 1.64
STRN4-203ENST00000435164 WIZO95785 1651 aa25.23■■□□□ 1.63
STRN4-203ENST00000435164 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
STRN4-203ENST00000435164 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
STRN4-203ENST00000435164 HMGXB3Q12766 1538 aa25.16■■□□□ 1.62
STRN4-203ENST00000435164 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.62
STRN4-203ENST00000435164 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
STRN4-203ENST00000435164 CCDC88BA6NC98 1476 aa24.66■■□□□ 1.54
STRN4-203ENST00000435164 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
STRN4-203ENST00000435164 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
STRN4-203ENST00000435164 NESP48681 1621 aa24.49■■□□□ 1.51
STRN4-203ENST00000435164 CFTRP13569 1480 aa24.44■■□□□ 1.5
STRN4-203ENST00000435164 PRDM2Q13029 1718 aa24.4■■□□□ 1.5
STRN4-203ENST00000435164 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
STRN4-203ENST00000435164 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
STRN4-203ENST00000435164 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
STRN4-203ENST00000435164 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
STRN4-203ENST00000435164 FANCD2Q9BXW9 1451 aa24.25■■□□□ 1.47
STRN4-203ENST00000435164 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.46
STRN4-203ENST00000435164 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
STRN4-203ENST00000435164 THOC2Q8NI27 1593 aaKnown RBP24.06■■□□□ 1.44
STRN4-203ENST00000435164 WDR62O43379 1518 aa23.96■■□□□ 1.43
STRN4-203ENST00000435164 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.42
STRN4-203ENST00000435164 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
STRN4-203ENST00000435164 DNMBPQ6XZF7 1577 aa23.93■■□□□ 1.42
STRN4-203ENST00000435164 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
STRN4-203ENST00000435164 CUX2O14529 1486 aa23.88■■□□□ 1.41
STRN4-203ENST00000435164 WRNQ14191 1432 aaPredicted RBP eCLIP23.87■■□□□ 1.41
STRN4-203ENST00000435164 CUX1P39880 1505 aa23.85■■□□□ 1.41
STRN4-203ENST00000435164 TOP2BQ02880 1626 aa23.79■■□□□ 1.4
STRN4-203ENST00000435164 BIVM-ERCC5R4GMW8 1640 aa23.79■■□□□ 1.4
STRN4-203ENST00000435164 SYNJ1O43426 1573 aa23.78■■□□□ 1.4
STRN4-203ENST00000435164 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
STRN4-203ENST00000435164 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
STRN4-203ENST00000435164 TRIM41Q8WV44 630 aa23.68■■□□□ 1.38
STRN4-203ENST00000435164 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
STRN4-203ENST00000435164 SOGA1O94964 1423 aa23.63■■□□□ 1.37
STRN4-203ENST00000435164 TARBP1Q13395 1621 aaKnown RBP23.6■■□□□ 1.37
STRN4-203ENST00000435164 RAD54L2Q9Y4B4 1467 aa23.6■■□□□ 1.37
STRN4-203ENST00000435164 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
STRN4-203ENST00000435164 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
STRN4-203ENST00000435164 ZNF608Q9ULD9 1512 aaPredicted RBP23.48■■□□□ 1.35
STRN4-203ENST00000435164 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.35
STRN4-203ENST00000435164 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
STRN4-203ENST00000435164 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
STRN4-203ENST00000435164 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.343e-7■■■■□ 26
STRN4-203ENST00000435164 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.34
STRN4-203ENST00000435164 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
STRN4-203ENST00000435164 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
STRN4-203ENST00000435164 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
STRN4-203ENST00000435164 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
STRN4-203ENST00000435164 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
STRN4-203ENST00000435164 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
STRN4-203ENST00000435164 MAGI1Q96QZ7 1491 aaPredicted RBP23.22■■□□□ 1.31
STRN4-203ENST00000435164 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
STRN4-203ENST00000435164 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
STRN4-203ENST00000435164 EEA1Q15075 1411 aa23.19■■□□□ 1.3
STRN4-203ENST00000435164 CUL7Q14999 1698 aa23.16■■□□□ 1.3
STRN4-203ENST00000435164 IGF1RP08069 1367 aa23.15■■□□□ 1.3
STRN4-203ENST00000435164 ADAMTS12P58397 1594 aa23.15■■□□□ 1.3
STRN4-203ENST00000435164 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
STRN4-203ENST00000435164 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
STRN4-203ENST00000435164 CHD1O14646 1710 aa23.11■■□□□ 1.29
STRN4-203ENST00000435164 FBLN2P98095 1184 aa23.11■■□□□ 1.29
STRN4-203ENST00000435164 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
STRN4-203ENST00000435164 CARMIL1Q5VZK9 1371 aa23.07■■□□□ 1.28
STRN4-203ENST00000435164 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
STRN4-203ENST00000435164 GRIN2AQ12879 1464 aa23.02■■□□□ 1.27
STRN4-203ENST00000435164 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
STRN4-203ENST00000435164 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
STRN4-203ENST00000435164 PRXQ9BXM0 1461 aa22.96■■□□□ 1.27
STRN4-203ENST00000435164 OSCARQ8IYS5 282 aa22.96■■□□□ 1.27
STRN4-203ENST00000435164 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
STRN4-203ENST00000435164 KIF21BO75037 1637 aa22.91■■□□□ 1.26
STRN4-203ENST00000435164 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
STRN4-203ENST00000435164 NUP160Q12769 1436 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms