RNA–Protein interactions for RNA: ENST00000446531.1

H2AFV-207, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 1,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-207ENST00000446531 NISCHQ9Y2I1 1504 aa38.95■■■■□ 3.83
H2AFV-207ENST00000446531 ABCC9O60706 1549 aa35.95■■■■□ 3.35
H2AFV-207ENST00000446531 CCDC180Q9P1Z9 1646 aa35.28■■■■□ 3.24
H2AFV-207ENST00000446531 DNAJC5BQ9UF47 199 aa34.55■■■■□ 3.12
H2AFV-207ENST00000446531 RB1CC1Q8TDY2 1594 aa33.92■■■■□ 3.02
H2AFV-207ENST00000446531 NACADO15069 1562 aa33.54■■■□□ 2.96
H2AFV-207ENST00000446531 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
H2AFV-207ENST00000446531 UNC13AQ9UPW8 1703 aa33.21■■■□□ 2.91
H2AFV-207ENST00000446531 BICRAQ9NZM4 1560 aa33.06■■■□□ 2.88
H2AFV-207ENST00000446531 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
H2AFV-207ENST00000446531 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
H2AFV-207ENST00000446531 SHROOM4Q9ULL8 1493 aa32.5■■■□□ 2.79
H2AFV-207ENST00000446531 CECR2Q9BXF3 1484 aa32.49■■■□□ 2.79
H2AFV-207ENST00000446531 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
H2AFV-207ENST00000446531 DNAJC5Q9H3Z4 198 aa32.26■■■□□ 2.75
H2AFV-207ENST00000446531 EIF4G1Q04637 1599 aaKnown RBP32.24■■■□□ 2.75
H2AFV-207ENST00000446531 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
H2AFV-207ENST00000446531 ZCCHC6Q5VYS8 1495 aaKnown RBP32.11■■■□□ 2.73
H2AFV-207ENST00000446531 SCRIBQ14160 1630 aa32■■■□□ 2.71
H2AFV-207ENST00000446531 CUX2O14529 1486 aa31.36■■■□□ 2.61
H2AFV-207ENST00000446531 ERCC6Q03468 1493 aa31.04■■■□□ 2.56
H2AFV-207ENST00000446531 NCAPD3P42695 1498 aa31.01■■■□□ 2.56
H2AFV-207ENST00000446531 ATAD2BQ9ULI0 1458 aa30.77■■■□□ 2.52
H2AFV-207ENST00000446531 NESP48681 1621 aa30.71■■■□□ 2.51
H2AFV-207ENST00000446531 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
H2AFV-207ENST00000446531 SMARCA2P51531 1590 aa30.62■■■□□ 2.49
H2AFV-207ENST00000446531 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
H2AFV-207ENST00000446531 SMARCA4P51532 1647 aa30.53■■■□□ 2.48
H2AFV-207ENST00000446531 LAMC3Q9Y6N6 1575 aa30.38■■■□□ 2.45
H2AFV-207ENST00000446531 BAZ1BQ9UIG0 1483 aaKnown RBP30.37■■■□□ 2.45
H2AFV-207ENST00000446531 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
H2AFV-207ENST00000446531 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
H2AFV-207ENST00000446531 KIF21AQ7Z4S6 1674 aa30.28■■■□□ 2.44
H2AFV-207ENST00000446531 BAZ1AQ9NRL2 1556 aaPredicted RBP30.24■■■□□ 2.43
H2AFV-207ENST00000446531 PDS5BQ9NTI5 1447 aa30.21■■■□□ 2.43
H2AFV-207ENST00000446531 MRC2Q9UBG0 1479 aa29.99■■■□□ 2.39
H2AFV-207ENST00000446531 MROH2BQ7Z745 1585 aa29.99■■■□□ 2.39
H2AFV-207ENST00000446531 CADPSQ9ULU8 1353 aa29.99■■■□□ 2.39
H2AFV-207ENST00000446531 WDR62O43379 1518 aa29.98■■■□□ 2.39
H2AFV-207ENST00000446531 OSCARQ8IYS5 282 aa29.78■■■□□ 2.36
H2AFV-207ENST00000446531 CEP164Q9UPV0 1460 aa29.69■■■□□ 2.34
H2AFV-207ENST00000446531 AEBP2Q6ZN18 517 aaPredicted RBP29.69■■■□□ 2.34
H2AFV-207ENST00000446531 FANCD2Q9BXW9 1451 aa29.61■■■□□ 2.33
H2AFV-207ENST00000446531 WIZO95785 1651 aa29.57■■■□□ 2.32
H2AFV-207ENST00000446531 CFTRP13569 1480 aa29.52■■■□□ 2.32
H2AFV-207ENST00000446531 RIMBP3CA6NJZ7 1639 aa29.48■■■□□ 2.31
H2AFV-207ENST00000446531 RIMBP3BA6NNM3 1639 aa29.48■■■□□ 2.31
H2AFV-207ENST00000446531 RIMBP3Q9UFD9 1639 aa29.48■■■□□ 2.31
H2AFV-207ENST00000446531 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
H2AFV-207ENST00000446531 ARHGEF11O15085 1522 aa29.31■■■□□ 2.28
H2AFV-207ENST00000446531 ZNF608Q9ULD9 1512 aaPredicted RBP29.21■■■□□ 2.27
H2AFV-207ENST00000446531 IFT140Q96RY7 1462 aa29.17■■■□□ 2.26
H2AFV-207ENST00000446531 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
H2AFV-207ENST00000446531 PRDM2Q13029 1718 aa29.11■■■□□ 2.25
H2AFV-207ENST00000446531 RSF1Q96T23 1441 aaPredicted RBP29.11■■■□□ 2.25
H2AFV-207ENST00000446531 CYB5RLQ6IPT4 315 aa29.1■■■□□ 2.25
H2AFV-207ENST00000446531 TOPBP1Q92547 1522 aa28.99■■■□□ 2.23
H2AFV-207ENST00000446531 ARAP1Q96P48 1450 aa28.98■■■□□ 2.23
H2AFV-207ENST00000446531 EIF4G3O43432 1585 aaKnown RBP28.97■■■□□ 2.23
H2AFV-207ENST00000446531 TRHP20396 242 aaPredicted RBP28.94■■■□□ 2.22
H2AFV-207ENST00000446531 CHD1O14646 1710 aa28.91■■■□□ 2.22
H2AFV-207ENST00000446531 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
H2AFV-207ENST00000446531 CCDC88BA6NC98 1476 aa28.85■■■□□ 2.21
H2AFV-207ENST00000446531 AQRO60306 1485 aaKnown RBP eCLIP28.84■■■□□ 2.212e-7■■■■■ 32.8
H2AFV-207ENST00000446531 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
H2AFV-207ENST00000446531 DNMBPQ6XZF7 1577 aa28.8■■■□□ 2.2
H2AFV-207ENST00000446531 FBLN2P98095 1184 aa28.68■■■□□ 2.18
H2AFV-207ENST00000446531 POLA1P09884 1462 aaPredicted RBP28.65■■■□□ 2.18
H2AFV-207ENST00000446531 CLASP1Q7Z460 1538 aa28.62■■■□□ 2.17
H2AFV-207ENST00000446531 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
H2AFV-207ENST00000446531 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
H2AFV-207ENST00000446531 SNAPC4Q5SXM2 1469 aa28.48■■■□□ 2.15
H2AFV-207ENST00000446531 SOGA1O94964 1423 aa28.48■■■□□ 2.15
H2AFV-207ENST00000446531 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
H2AFV-207ENST00000446531 SYNJ1O43426 1573 aa28.45■■■□□ 2.15
H2AFV-207ENST00000446531 MAGI1Q96QZ7 1491 aaPredicted RBP28.41■■■□□ 2.14
H2AFV-207ENST00000446531 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
H2AFV-207ENST00000446531 SYNJ2O15056 1496 aa28.33■■■□□ 2.13
H2AFV-207ENST00000446531 GRIN2BQ13224 1484 aa28.33■■■□□ 2.13
H2AFV-207ENST00000446531 FGD5Q6ZNL6 1462 aa28.33■■■□□ 2.13
H2AFV-207ENST00000446531 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
H2AFV-207ENST00000446531 CUX1P39880 1505 aa28.22■■■□□ 2.11
H2AFV-207ENST00000446531 PBRM1Q86U86 1689 aa28.14■■■□□ 2.1
H2AFV-207ENST00000446531 ERCC6L2Q5T890 1561 aa28.1■■■□□ 2.09
H2AFV-207ENST00000446531 ABCA5Q8WWZ7 1642 aa28.03■■■□□ 2.08
H2AFV-207ENST00000446531 ABCA10Q8WWZ4 1543 aa28.01■■■□□ 2.07
H2AFV-207ENST00000446531 GRIN2AQ12879 1464 aa27.97■■■□□ 2.07
H2AFV-207ENST00000446531 CEP170Q5SW79 1584 aa27.97■■■□□ 2.07
H2AFV-207ENST00000446531 KIF13AQ9H1H9 1805 aa27.97■■■□□ 2.07
H2AFV-207ENST00000446531 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
H2AFV-207ENST00000446531 NUP160Q12769 1436 aa27.95■■■□□ 2.07
H2AFV-207ENST00000446531 SHROOM2Q13796 1616 aa27.92■■■□□ 2.06
H2AFV-207ENST00000446531 ADAMTS12P58397 1594 aa27.84■■■□□ 2.05
H2AFV-207ENST00000446531 FHAD1B1AJZ9 1412 aa27.74■■■□□ 2.03
H2AFV-207ENST00000446531 ABCC10Q5T3U5 1492 aa27.71■■■□□ 2.03
H2AFV-207ENST00000446531 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
H2AFV-207ENST00000446531 PRG4Q92954 1404 aaPredicted RBP27.67■■■□□ 2.02
H2AFV-207ENST00000446531 KDM4FA0A1W2PPD8 638 aa27.67■■■□□ 2.02
H2AFV-207ENST00000446531 FAM69CQ0P6D2 419 aa27.65■■■□□ 2.02
H2AFV-207ENST00000446531 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms