RNA–Protein interactions for RNA: ENST00000413966.1

PDIA4-202, Transcript of protein disulfide isomerase family A member 4, humanhuman

TSL 2

Gene PDIA4, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDIA4-202ENST00000413966 NISCHQ9Y2I1 1504 aa45.94■■■■■ 4.95
PDIA4-202ENST00000413966 ABCC9O60706 1549 aa41.3■■■■■ 4.2
PDIA4-202ENST00000413966 CCDC180Q9P1Z9 1646 aa41.28■■■■■ 4.2
PDIA4-202ENST00000413966 RB1CC1Q8TDY2 1594 aa39.29■■■■□ 3.88
PDIA4-202ENST00000413966 NACADO15069 1562 aa38.99■■■■□ 3.83
PDIA4-202ENST00000413966 DCAF8L2P0C7V8 631 aa38.78■■■■□ 3.8
PDIA4-202ENST00000413966 DNAJC5BQ9UF47 199 aa38.73■■■■□ 3.79
PDIA4-202ENST00000413966 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
PDIA4-202ENST00000413966 PABPN1Q86U42 306 aaKnown RBP eCLIP38.43■■■■□ 3.74
PDIA4-202ENST00000413966 MYO15BQ96JP2 1530 aa38.41■■■■□ 3.74
PDIA4-202ENST00000413966 BICRAQ9NZM4 1560 aa38.16■■■■□ 3.7
PDIA4-202ENST00000413966 ZCCHC6Q5VYS8 1495 aaKnown RBP38.08■■■■□ 3.69
PDIA4-202ENST00000413966 DCAF1Q9Y4B6 1507 aa37.92■■■■□ 3.66
PDIA4-202ENST00000413966 SCRIBQ14160 1630 aa37.65■■■■□ 3.62
PDIA4-202ENST00000413966 SHROOM4Q9ULL8 1493 aa37.58■■■■□ 3.61
PDIA4-202ENST00000413966 CC2D2AQ9P2K1 1620 aa37.32■■■■□ 3.56
PDIA4-202ENST00000413966 EIF4G1Q04637 1599 aaKnown RBP37.22■■■■□ 3.55
PDIA4-202ENST00000413966 CECR2Q9BXF3 1484 aa37.19■■■■□ 3.54
PDIA4-202ENST00000413966 NCAPD3P42695 1498 aa35.97■■■■□ 3.35
PDIA4-202ENST00000413966 ATAD2BQ9ULI0 1458 aa35.88■■■■□ 3.33
PDIA4-202ENST00000413966 SMARCA4P51532 1647 aa35.88■■■■□ 3.33
PDIA4-202ENST00000413966 SMARCA2P51531 1590 aa35.79■■■■□ 3.32
PDIA4-202ENST00000413966 HMGXB3Q12766 1538 aa35.73■■■■□ 3.31
PDIA4-202ENST00000413966 BAZ1AQ9NRL2 1556 aaPredicted RBP35.67■■■■□ 3.3
PDIA4-202ENST00000413966 ERCC6Q03468 1493 aa35.66■■■■□ 3.3
PDIA4-202ENST00000413966 CUX2O14529 1486 aa35.57■■■■□ 3.28
PDIA4-202ENST00000413966 DNAJC5Q9H3Z4 198 aa35.56■■■■□ 3.28
PDIA4-202ENST00000413966 BAZ1BQ9UIG0 1483 aaKnown RBP35.55■■■■□ 3.28
PDIA4-202ENST00000413966 PEG3Q9GZU2 1588 aa35.5■■■■□ 3.27
PDIA4-202ENST00000413966 NESP48681 1621 aa35.48■■■■□ 3.27
PDIA4-202ENST00000413966 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
PDIA4-202ENST00000413966 LAMC3Q9Y6N6 1575 aa35.21■■■■□ 3.23
PDIA4-202ENST00000413966 THOC2Q8NI27 1593 aaKnown RBP35.14■■■■□ 3.22
PDIA4-202ENST00000413966 KIF21AQ7Z4S6 1674 aa35.08■■■■□ 3.21
PDIA4-202ENST00000413966 WIZO95785 1651 aa35.03■■■■□ 3.2
PDIA4-202ENST00000413966 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
PDIA4-202ENST00000413966 CADPSQ9ULU8 1353 aa34.87■■■■□ 3.17
PDIA4-202ENST00000413966 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
PDIA4-202ENST00000413966 RSF1Q96T23 1441 aaPredicted RBP34.64■■■■□ 3.14
PDIA4-202ENST00000413966 WDR62O43379 1518 aa34.62■■■■□ 3.13
PDIA4-202ENST00000413966 CEP164Q9UPV0 1460 aa34.57■■■■□ 3.12
PDIA4-202ENST00000413966 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
PDIA4-202ENST00000413966 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
PDIA4-202ENST00000413966 CFTRP13569 1480 aa34.48■■■■□ 3.11
PDIA4-202ENST00000413966 URB2Q14146 1524 aaKnown RBP34.25■■■■□ 3.07
PDIA4-202ENST00000413966 PRDM2Q13029 1718 aa34.25■■■■□ 3.07
PDIA4-202ENST00000413966 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
PDIA4-202ENST00000413966 TRIM41Q8WV44 630 aa34.05■■■■□ 3.04
PDIA4-202ENST00000413966 OSCARQ8IYS5 282 aa33.91■■■■□ 3.02
PDIA4-202ENST00000413966 TOPBP1Q92547 1522 aa33.87■■■■□ 3.01
PDIA4-202ENST00000413966 IFT140Q96RY7 1462 aa33.85■■■■□ 3.01
PDIA4-202ENST00000413966 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
PDIA4-202ENST00000413966 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
PDIA4-202ENST00000413966 DNMBPQ6XZF7 1577 aa33.75■■■□□ 2.99
PDIA4-202ENST00000413966 EIF4G3O43432 1585 aaKnown RBP33.68■■■□□ 2.98
PDIA4-202ENST00000413966 TARBP1Q13395 1621 aaKnown RBP33.59■■■□□ 2.97
PDIA4-202ENST00000413966 RIMBP3CA6NJZ7 1639 aa33.57■■■□□ 2.96
PDIA4-202ENST00000413966 RIMBP3BA6NNM3 1639 aa33.57■■■□□ 2.96
PDIA4-202ENST00000413966 RIMBP3Q9UFD9 1639 aa33.57■■■□□ 2.96
PDIA4-202ENST00000413966 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
PDIA4-202ENST00000413966 AQRO60306 1485 aaKnown RBP eCLIP33.5■■■□□ 2.951e-6■■□□□ 14.4
PDIA4-202ENST00000413966 CHD1O14646 1710 aa33.47■■■□□ 2.95
PDIA4-202ENST00000413966 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
PDIA4-202ENST00000413966 RAD54L2Q9Y4B4 1467 aa33.4■■■□□ 2.94
PDIA4-202ENST00000413966 SOGA1O94964 1423 aa33.35■■■□□ 2.93
PDIA4-202ENST00000413966 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
PDIA4-202ENST00000413966 CUX1P39880 1505 aa33.29■■■□□ 2.92
PDIA4-202ENST00000413966 TDRD9Q8NDG6 1382 aaKnown RBP33.29■■■□□ 2.92
PDIA4-202ENST00000413966 FBLN2P98095 1184 aa33.28■■■□□ 2.92
PDIA4-202ENST00000413966 WDR97A6NE52 1622 aa33.21■■■□□ 2.91
PDIA4-202ENST00000413966 SNAPC4Q5SXM2 1469 aa33.18■■■□□ 2.9
PDIA4-202ENST00000413966 CYB5RLQ6IPT4 315 aa33.15■■■□□ 2.9
PDIA4-202ENST00000413966 ARAP1Q96P48 1450 aa33.11■■■□□ 2.89
PDIA4-202ENST00000413966 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
PDIA4-202ENST00000413966 MAGI1Q96QZ7 1491 aaPredicted RBP33.07■■■□□ 2.88
PDIA4-202ENST00000413966 GRIN2BQ13224 1484 aa33.06■■■□□ 2.88
PDIA4-202ENST00000413966 CLASP1Q7Z460 1538 aa33.02■■■□□ 2.88
PDIA4-202ENST00000413966 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
PDIA4-202ENST00000413966 CHMP7Q8WUX9 453 aaPredicted RBP33.01■■■□□ 2.87
PDIA4-202ENST00000413966 SYNJ1O43426 1573 aa33■■■□□ 2.87
PDIA4-202ENST00000413966 SYNJ2O15056 1496 aa32.96■■■□□ 2.87
PDIA4-202ENST00000413966 GAPVD1Q14C86 1478 aa32.95■■■□□ 2.87
PDIA4-202ENST00000413966 ABCA10Q8WWZ4 1543 aa32.91■■■□□ 2.86
PDIA4-202ENST00000413966 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
PDIA4-202ENST00000413966 TRHP20396 242 aaPredicted RBP32.81■■■□□ 2.84
PDIA4-202ENST00000413966 BIVM-ERCC5R4GMW8 1640 aa32.77■■■□□ 2.84
PDIA4-202ENST00000413966 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
PDIA4-202ENST00000413966 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
PDIA4-202ENST00000413966 ADAMTS12P58397 1594 aa32.66■■■□□ 2.82
PDIA4-202ENST00000413966 GRIN2AQ12879 1464 aa32.66■■■□□ 2.82
PDIA4-202ENST00000413966 CEP170Q5SW79 1584 aa32.57■■■□□ 2.8
PDIA4-202ENST00000413966 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
PDIA4-202ENST00000413966 NUP160Q12769 1436 aa32.53■■■□□ 2.8
PDIA4-202ENST00000413966 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.8
PDIA4-202ENST00000413966 ERICH3Q5RHP9 1530 aa32.5■■■□□ 2.79
PDIA4-202ENST00000413966 SHROOM2Q13796 1616 aa32.43■■■□□ 2.78
PDIA4-202ENST00000413966 PRG4Q92954 1404 aaPredicted RBP32.23■■■□□ 2.75
PDIA4-202ENST00000413966 RUSC2Q8N2Y8 1516 aa32.21■■■□□ 2.75
PDIA4-202ENST00000413966 JPH4Q96JJ6 628 aa32.17■■■□□ 2.74
PDIA4-202ENST00000413966 KIF27Q86VH2 1401 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms