RNA–Protein interactions for RNA: ENST00000597021.6

STRN4-214, Transcript of striatin 4, humanhuman

TSL 3

Gene STRN4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-214ENST00000597021 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
STRN4-214ENST00000597021 ABCC9O60706 1549 aa31.57■■■□□ 2.64
STRN4-214ENST00000597021 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
STRN4-214ENST00000597021 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
STRN4-214ENST00000597021 DNAJC5BQ9UF47 199 aa29.77■■■□□ 2.36
STRN4-214ENST00000597021 NACADO15069 1562 aa29.61■■■□□ 2.33
STRN4-214ENST00000597021 DCAF8L2P0C7V8 631 aa29.48■■■□□ 2.31
STRN4-214ENST00000597021 PABPN1Q86U42 306 aaKnown RBP eCLIP29.34■■■□□ 2.29
STRN4-214ENST00000597021 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
STRN4-214ENST00000597021 MYO15BQ96JP2 1530 aa29.07■■■□□ 2.24
STRN4-214ENST00000597021 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
STRN4-214ENST00000597021 ZCCHC6Q5VYS8 1495 aaKnown RBP28.75■■■□□ 2.19
STRN4-214ENST00000597021 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.17
STRN4-214ENST00000597021 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
STRN4-214ENST00000597021 SCRIBQ14160 1630 aa28.56■■■□□ 2.16
STRN4-214ENST00000597021 CC2D2AQ9P2K1 1620 aa28.48■■■□□ 2.15
STRN4-214ENST00000597021 CECR2Q9BXF3 1484 aa28.43■■■□□ 2.14
STRN4-214ENST00000597021 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
STRN4-214ENST00000597021 DNAJC5Q9H3Z4 198 aa27.47■■□□□ 1.99
STRN4-214ENST00000597021 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
STRN4-214ENST00000597021 ERCC6Q03468 1493 aa27.27■■□□□ 1.96
STRN4-214ENST00000597021 CUX2O14529 1486 aa27.24■■□□□ 1.95
STRN4-214ENST00000597021 ATAD2BQ9ULI0 1458 aa27.24■■□□□ 1.95
STRN4-214ENST00000597021 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
STRN4-214ENST00000597021 SMARCA2P51531 1590 aa27.15■■□□□ 1.94
STRN4-214ENST00000597021 HMGXB3Q12766 1538 aa27.13■■□□□ 1.93
STRN4-214ENST00000597021 NESP48681 1621 aa27.05■■□□□ 1.92
STRN4-214ENST00000597021 BAZ1AQ9NRL2 1556 aaPredicted RBP26.99■■□□□ 1.91
STRN4-214ENST00000597021 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
STRN4-214ENST00000597021 PEG3Q9GZU2 1588 aa26.86■■□□□ 1.89
STRN4-214ENST00000597021 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
STRN4-214ENST00000597021 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
STRN4-214ENST00000597021 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
STRN4-214ENST00000597021 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.87
STRN4-214ENST00000597021 PDS5BQ9NTI5 1447 aa26.62■■□□□ 1.85
STRN4-214ENST00000597021 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
STRN4-214ENST00000597021 WIZO95785 1651 aa26.48■■□□□ 1.83
STRN4-214ENST00000597021 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
STRN4-214ENST00000597021 WDR62O43379 1518 aa26.36■■□□□ 1.81
STRN4-214ENST00000597021 CEP164Q9UPV0 1460 aa26.29■■□□□ 1.8
STRN4-214ENST00000597021 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
STRN4-214ENST00000597021 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
STRN4-214ENST00000597021 CFTRP13569 1480 aa26.15■■□□□ 1.78
STRN4-214ENST00000597021 RSF1Q96T23 1441 aaPredicted RBP26.13■■□□□ 1.77
STRN4-214ENST00000597021 TOP2AP11388 1531 aaKnown RBP26.1■■□□□ 1.77
STRN4-214ENST00000597021 URB2Q14146 1524 aaKnown RBP26.04■■□□□ 1.76
STRN4-214ENST00000597021 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
STRN4-214ENST00000597021 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
STRN4-214ENST00000597021 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
STRN4-214ENST00000597021 ZNF608Q9ULD9 1512 aaPredicted RBP25.77■■□□□ 1.72
STRN4-214ENST00000597021 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
STRN4-214ENST00000597021 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
STRN4-214ENST00000597021 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
STRN4-214ENST00000597021 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
STRN4-214ENST00000597021 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
STRN4-214ENST00000597021 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
STRN4-214ENST00000597021 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
STRN4-214ENST00000597021 ABCC8Q09428 1581 aa25.59■■□□□ 1.69
STRN4-214ENST00000597021 ARHGEF11O15085 1522 aa25.58■■□□□ 1.69
STRN4-214ENST00000597021 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.674e-7■■■□□ 16.1
STRN4-214ENST00000597021 TARBP1Q13395 1621 aaKnown RBP25.5■■□□□ 1.67
STRN4-214ENST00000597021 CHD1O14646 1710 aa25.49■■□□□ 1.67
STRN4-214ENST00000597021 POLA1P09884 1462 aaPredicted RBP25.43■■□□□ 1.66
STRN4-214ENST00000597021 FBLN2P98095 1184 aa25.4■■□□□ 1.66
STRN4-214ENST00000597021 CYB5RLQ6IPT4 315 aa25.4■■□□□ 1.66
STRN4-214ENST00000597021 RAD54L2Q9Y4B4 1467 aa25.36■■□□□ 1.65
STRN4-214ENST00000597021 ARAP1Q96P48 1450 aa25.32■■□□□ 1.64
STRN4-214ENST00000597021 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
STRN4-214ENST00000597021 SOGA1O94964 1423 aa25.29■■□□□ 1.64
STRN4-214ENST00000597021 FGD5Q6ZNL6 1462 aa25.25■■□□□ 1.63
STRN4-214ENST00000597021 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
STRN4-214ENST00000597021 TRHP20396 242 aaPredicted RBP25.22■■□□□ 1.63
STRN4-214ENST00000597021 CUX1P39880 1505 aa25.19■■□□□ 1.62
STRN4-214ENST00000597021 WDR97A6NE52 1622 aa25.18■■□□□ 1.62
STRN4-214ENST00000597021 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
STRN4-214ENST00000597021 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
STRN4-214ENST00000597021 MAGI1Q96QZ7 1491 aaPredicted RBP25.13■■□□□ 1.61
STRN4-214ENST00000597021 SYNJ1O43426 1573 aa25.12■■□□□ 1.61
STRN4-214ENST00000597021 GRIN2BQ13224 1484 aa25.11■■□□□ 1.61
STRN4-214ENST00000597021 SYNJ2O15056 1496 aa25.05■■□□□ 1.6
STRN4-214ENST00000597021 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
STRN4-214ENST00000597021 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
STRN4-214ENST00000597021 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
STRN4-214ENST00000597021 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
STRN4-214ENST00000597021 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
STRN4-214ENST00000597021 GRIN2AQ12879 1464 aa24.8■■□□□ 1.56
STRN4-214ENST00000597021 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
STRN4-214ENST00000597021 ERCC6L2Q5T890 1561 aa24.78■■□□□ 1.56
STRN4-214ENST00000597021 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
STRN4-214ENST00000597021 CEP170Q5SW79 1584 aa24.73■■□□□ 1.55
STRN4-214ENST00000597021 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
STRN4-214ENST00000597021 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
STRN4-214ENST00000597021 NUP160Q12769 1436 aa24.69■■□□□ 1.54
STRN4-214ENST00000597021 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
STRN4-214ENST00000597021 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
STRN4-214ENST00000597021 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
STRN4-214ENST00000597021 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
STRN4-214ENST00000597021 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
STRN4-214ENST00000597021 KIF13AQ9H1H9 1805 aa24.46■■□□□ 1.51
STRN4-214ENST00000597021 JPH4Q96JJ6 628 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms