RNA–Protein interactions for RNA: ENST00000479992.5

RPL13A-209, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 850 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-209ENST00000479992 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
RPL13A-209ENST00000479992 CCDC180Q9P1Z9 1646 aa34.36■■■■□ 3.09
RPL13A-209ENST00000479992 ABCC9O60706 1549 aa33.6■■■□□ 2.97
RPL13A-209ENST00000479992 DCAF8L2P0C7V8 631 aa32.32■■■□□ 2.76
RPL13A-209ENST00000479992 RB1CC1Q8TDY2 1594 aa32.32■■■□□ 2.76
RPL13A-209ENST00000479992 ZCCHC6Q5VYS8 1495 aaKnown RBP32.28■■■□□ 2.76
RPL13A-209ENST00000479992 NACADO15069 1562 aa32.28■■■□□ 2.76
RPL13A-209ENST00000479992 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
RPL13A-209ENST00000479992 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
RPL13A-209ENST00000479992 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
RPL13A-209ENST00000479992 SCRIBQ14160 1630 aa31.43■■■□□ 2.62
RPL13A-209ENST00000479992 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.624e-6■□□□□ 9.3
RPL13A-209ENST00000479992 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
RPL13A-209ENST00000479992 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
RPL13A-209ENST00000479992 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
RPL13A-209ENST00000479992 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
RPL13A-209ENST00000479992 CC2D2AQ9P2K1 1620 aa30.37■■■□□ 2.45
RPL13A-209ENST00000479992 CECR2Q9BXF3 1484 aa30.17■■■□□ 2.42
RPL13A-209ENST00000479992 SMARCA4P51532 1647 aa30.03■■■□□ 2.4
RPL13A-209ENST00000479992 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
RPL13A-209ENST00000479992 MROH2BQ7Z745 1585 aa29.85■■■□□ 2.37
RPL13A-209ENST00000479992 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
RPL13A-209ENST00000479992 SMARCA2P51531 1590 aa29.79■■■□□ 2.36
RPL13A-209ENST00000479992 NCAPD3P42695 1498 aa29.77■■■□□ 2.36
RPL13A-209ENST00000479992 PEG3Q9GZU2 1588 aa29.7■■■□□ 2.35
RPL13A-209ENST00000479992 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
RPL13A-209ENST00000479992 BAZ1BQ9UIG0 1483 aaKnown RBP29.61■■■□□ 2.33
RPL13A-209ENST00000479992 WIZO95785 1651 aa29.53■■■□□ 2.32
RPL13A-209ENST00000479992 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
RPL13A-209ENST00000479992 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
RPL13A-209ENST00000479992 NESP48681 1621 aa29.1■■■□□ 2.25
RPL13A-209ENST00000479992 LAMC3Q9Y6N6 1575 aa29■■■□□ 2.23
RPL13A-209ENST00000479992 ERCC6Q03468 1493 aa28.96■■■□□ 2.23
RPL13A-209ENST00000479992 CADPSQ9ULU8 1353 aa28.91■■■□□ 2.22
RPL13A-209ENST00000479992 CCDC88BA6NC98 1476 aa28.86■■■□□ 2.21
RPL13A-209ENST00000479992 SUPT5HO00267 1087 aaKnown RBP28.86■■■□□ 2.21
RPL13A-209ENST00000479992 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
RPL13A-209ENST00000479992 CFTRP13569 1480 aa28.77■■■□□ 2.2
RPL13A-209ENST00000479992 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
RPL13A-209ENST00000479992 THOC2Q8NI27 1593 aaKnown RBP28.63■■■□□ 2.17
RPL13A-209ENST00000479992 FANCD2Q9BXW9 1451 aa28.62■■■□□ 2.17
RPL13A-209ENST00000479992 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
RPL13A-209ENST00000479992 CUX2O14529 1486 aa28.58■■■□□ 2.17
RPL13A-209ENST00000479992 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
RPL13A-209ENST00000479992 MRC2Q9UBG0 1479 aa28.53■■■□□ 2.16
RPL13A-209ENST00000479992 WDR62O43379 1518 aa28.42■■■□□ 2.14
RPL13A-209ENST00000479992 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
RPL13A-209ENST00000479992 TOPBP1Q92547 1522 aa28.17■■■□□ 2.1
RPL13A-209ENST00000479992 DNMBPQ6XZF7 1577 aa28.15■■■□□ 2.1
RPL13A-209ENST00000479992 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
RPL13A-209ENST00000479992 CUX1P39880 1505 aa28■■■□□ 2.07
RPL13A-209ENST00000479992 IFT140Q96RY7 1462 aa27.96■■■□□ 2.07
RPL13A-209ENST00000479992 POLA1P09884 1462 aaPredicted RBP27.95■■■□□ 2.06
RPL13A-209ENST00000479992 FGD5Q6ZNL6 1462 aa27.89■■■□□ 2.06
RPL13A-209ENST00000479992 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
RPL13A-209ENST00000479992 TARBP1Q13395 1621 aaKnown RBP27.85■■■□□ 2.05
RPL13A-209ENST00000479992 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
RPL13A-209ENST00000479992 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.05
RPL13A-209ENST00000479992 SOGA1O94964 1423 aa27.81■■■□□ 2.04
RPL13A-209ENST00000479992 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
RPL13A-209ENST00000479992 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
RPL13A-209ENST00000479992 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
RPL13A-209ENST00000479992 BIVM-ERCC5R4GMW8 1640 aa27.76■■■□□ 2.03
RPL13A-209ENST00000479992 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.025e-18■■■■■ 39.2
RPL13A-209ENST00000479992 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
RPL13A-209ENST00000479992 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
RPL13A-209ENST00000479992 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
RPL13A-209ENST00000479992 DNAJC5Q9H3Z4 198 aa27.57■■■□□ 2
RPL13A-209ENST00000479992 ABCA5Q8WWZ7 1642 aa27.51■■□□□ 1.99
RPL13A-209ENST00000479992 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
RPL13A-209ENST00000479992 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
RPL13A-209ENST00000479992 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
RPL13A-209ENST00000479992 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
RPL13A-209ENST00000479992 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
RPL13A-209ENST00000479992 OSCARQ8IYS5 282 aa27.38■■□□□ 1.97
RPL13A-209ENST00000479992 CHD1O14646 1710 aa27.38■■□□□ 1.97
RPL13A-209ENST00000479992 FBLN2P98095 1184 aa27.36■■□□□ 1.97
RPL13A-209ENST00000479992 SYNJ2O15056 1496 aa27.3■■□□□ 1.96
RPL13A-209ENST00000479992 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
RPL13A-209ENST00000479992 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
RPL13A-209ENST00000479992 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
RPL13A-209ENST00000479992 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
RPL13A-209ENST00000479992 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
RPL13A-209ENST00000479992 FHAD1B1AJZ9 1412 aa27.17■■□□□ 1.94
RPL13A-209ENST00000479992 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
RPL13A-209ENST00000479992 IGF1RP08069 1367 aa27.09■■□□□ 1.93
RPL13A-209ENST00000479992 CLASP1Q7Z460 1538 aa27.09■■□□□ 1.93
RPL13A-209ENST00000479992 CUL7Q14999 1698 aa27.05■■□□□ 1.92
RPL13A-209ENST00000479992 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
RPL13A-209ENST00000479992 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
RPL13A-209ENST00000479992 NUP160Q12769 1436 aa27■■□□□ 1.91
RPL13A-209ENST00000479992 ARHGEF11O15085 1522 aa27■■□□□ 1.91
RPL13A-209ENST00000479992 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
RPL13A-209ENST00000479992 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
RPL13A-209ENST00000479992 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
RPL13A-209ENST00000479992 CHIC1Q5VXU3 224 aa26.96■■□□□ 1.91
RPL13A-209ENST00000479992 CARMIL1Q5VZK9 1371 aa26.95■■□□□ 1.9
RPL13A-209ENST00000479992 RAPGEF2Q9Y4G8 1499 aa26.81■■□□□ 1.88
RPL13A-209ENST00000479992 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
RPL13A-209ENST00000479992 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms