RNA–Protein interactions for RNA: ENST00000437072.5

H2AFV-206, Transcript of H2A histone family member V, humanhuman

TSL 4 BASIC

Gene H2AFV, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-206ENST00000437072 NISCHQ9Y2I1 1504 aa37.34■■■■□ 3.57
H2AFV-206ENST00000437072 ABCC9O60706 1549 aa35.06■■■■□ 3.2
H2AFV-206ENST00000437072 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
H2AFV-206ENST00000437072 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3
H2AFV-206ENST00000437072 RB1CC1Q8TDY2 1594 aa32.75■■■□□ 2.83
H2AFV-206ENST00000437072 PABPN1Q86U42 306 aaKnown RBP eCLIP32.57■■■□□ 2.8
H2AFV-206ENST00000437072 NACADO15069 1562 aa32.28■■■□□ 2.76
H2AFV-206ENST00000437072 UNC13AQ9UPW8 1703 aa32.08■■■□□ 2.73
H2AFV-206ENST00000437072 DCAF8L2P0C7V8 631 aa32.06■■■□□ 2.72
H2AFV-206ENST00000437072 BICRAQ9NZM4 1560 aa31.98■■■□□ 2.71
H2AFV-206ENST00000437072 DNAJC5Q9H3Z4 198 aa31.85■■■□□ 2.69
H2AFV-206ENST00000437072 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
H2AFV-206ENST00000437072 CC2D2AQ9P2K1 1620 aa31.57■■■□□ 2.64
H2AFV-206ENST00000437072 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
H2AFV-206ENST00000437072 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
H2AFV-206ENST00000437072 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
H2AFV-206ENST00000437072 SCRIBQ14160 1630 aa30.91■■■□□ 2.54
H2AFV-206ENST00000437072 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
H2AFV-206ENST00000437072 DCAF1Q9Y4B6 1507 aa30.68■■■□□ 2.5
H2AFV-206ENST00000437072 CUX2O14529 1486 aa30.53■■■□□ 2.48
H2AFV-206ENST00000437072 ERCC6Q03468 1493 aa30.26■■■□□ 2.44
H2AFV-206ENST00000437072 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
H2AFV-206ENST00000437072 NCAPD3P42695 1498 aa29.88■■■□□ 2.37
H2AFV-206ENST00000437072 NESP48681 1621 aa29.86■■■□□ 2.37
H2AFV-206ENST00000437072 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
H2AFV-206ENST00000437072 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
H2AFV-206ENST00000437072 HMGXB3Q12766 1538 aa29.5■■■□□ 2.31
H2AFV-206ENST00000437072 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
H2AFV-206ENST00000437072 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
H2AFV-206ENST00000437072 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
H2AFV-206ENST00000437072 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
H2AFV-206ENST00000437072 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
H2AFV-206ENST00000437072 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.26
H2AFV-206ENST00000437072 BAZ1AQ9NRL2 1556 aaPredicted RBP29.06■■■□□ 2.24
H2AFV-206ENST00000437072 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
H2AFV-206ENST00000437072 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
H2AFV-206ENST00000437072 PEG3Q9GZU2 1588 aa29.01■■■□□ 2.24
H2AFV-206ENST00000437072 WDR62O43379 1518 aa29■■■□□ 2.23
H2AFV-206ENST00000437072 CADPSQ9ULU8 1353 aa28.94■■■□□ 2.22
H2AFV-206ENST00000437072 MROH2BQ7Z745 1585 aa28.83■■■□□ 2.21
H2AFV-206ENST00000437072 RIMBP3CA6NJZ7 1639 aa28.77■■■□□ 2.2
H2AFV-206ENST00000437072 RIMBP3BA6NNM3 1639 aa28.77■■■□□ 2.2
H2AFV-206ENST00000437072 RIMBP3Q9UFD9 1639 aa28.77■■■□□ 2.2
H2AFV-206ENST00000437072 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
H2AFV-206ENST00000437072 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
H2AFV-206ENST00000437072 ARHGEF11O15085 1522 aa28.57■■■□□ 2.16
H2AFV-206ENST00000437072 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
H2AFV-206ENST00000437072 URB2Q14146 1524 aaKnown RBP28.49■■■□□ 2.15
H2AFV-206ENST00000437072 TRHP20396 242 aaPredicted RBP28.47■■■□□ 2.15
H2AFV-206ENST00000437072 WIZO95785 1651 aa28.4■■■□□ 2.14
H2AFV-206ENST00000437072 CFTRP13569 1480 aa28.38■■■□□ 2.13
H2AFV-206ENST00000437072 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
H2AFV-206ENST00000437072 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
H2AFV-206ENST00000437072 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
H2AFV-206ENST00000437072 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
H2AFV-206ENST00000437072 EIF4G3O43432 1585 aaKnown RBP28.03■■■□□ 2.08
H2AFV-206ENST00000437072 CHD1O14646 1710 aa28.01■■■□□ 2.07
H2AFV-206ENST00000437072 RSF1Q96T23 1441 aaPredicted RBP27.97■■■□□ 2.07
H2AFV-206ENST00000437072 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.072e-7■■■■■ 32.8
H2AFV-206ENST00000437072 FBLN2P98095 1184 aa27.95■■■□□ 2.06
H2AFV-206ENST00000437072 TOPBP1Q92547 1522 aa27.95■■■□□ 2.06
H2AFV-206ENST00000437072 TOP2AP11388 1531 aaKnown RBP27.89■■■□□ 2.06
H2AFV-206ENST00000437072 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
H2AFV-206ENST00000437072 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
H2AFV-206ENST00000437072 DNMBPQ6XZF7 1577 aa27.7■■■□□ 2.03
H2AFV-206ENST00000437072 CLASP1Q7Z460 1538 aa27.7■■■□□ 2.02
H2AFV-206ENST00000437072 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
H2AFV-206ENST00000437072 CCDC88BA6NC98 1476 aa27.68■■■□□ 2.02
H2AFV-206ENST00000437072 POLA1P09884 1462 aaPredicted RBP27.62■■■□□ 2.01
H2AFV-206ENST00000437072 TDRD9Q8NDG6 1382 aaKnown RBP27.61■■■□□ 2.01
H2AFV-206ENST00000437072 RAD54L2Q9Y4B4 1467 aa27.6■■■□□ 2.01
H2AFV-206ENST00000437072 SNAPC4Q5SXM2 1469 aa27.58■■■□□ 2.01
H2AFV-206ENST00000437072 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
H2AFV-206ENST00000437072 SYNJ1O43426 1573 aa27.5■■□□□ 1.99
H2AFV-206ENST00000437072 GAPVD1Q14C86 1478 aa27.49■■□□□ 1.99
H2AFV-206ENST00000437072 SOGA1O94964 1423 aa27.46■■□□□ 1.99
H2AFV-206ENST00000437072 ILDR1Q86SU0 546 aaPredicted RBP27.41■■□□□ 1.98
H2AFV-206ENST00000437072 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
H2AFV-206ENST00000437072 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
H2AFV-206ENST00000437072 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
H2AFV-206ENST00000437072 ERCC6L2Q5T890 1561 aa27.3■■□□□ 1.96
H2AFV-206ENST00000437072 FGD5Q6ZNL6 1462 aa27.28■■□□□ 1.96
H2AFV-206ENST00000437072 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
H2AFV-206ENST00000437072 KDM4FA0A1W2PPD8 638 aa27.16■■□□□ 1.94
H2AFV-206ENST00000437072 KIF13AQ9H1H9 1805 aa27.15■■□□□ 1.94
H2AFV-206ENST00000437072 CUX1P39880 1505 aa27.13■■□□□ 1.93
H2AFV-206ENST00000437072 PBRM1Q86U86 1689 aa27.08■■□□□ 1.93
H2AFV-206ENST00000437072 CEP170Q5SW79 1584 aa27.05■■□□□ 1.92
H2AFV-206ENST00000437072 GRIN2AQ12879 1464 aa26.96■■□□□ 1.91
H2AFV-206ENST00000437072 FAM69CQ0P6D2 419 aa26.96■■□□□ 1.91
H2AFV-206ENST00000437072 NUP160Q12769 1436 aa26.94■■□□□ 1.9
H2AFV-206ENST00000437072 ABCA5Q8WWZ7 1642 aa26.93■■□□□ 1.9
H2AFV-206ENST00000437072 SHROOM2Q13796 1616 aa26.9■■□□□ 1.9
H2AFV-206ENST00000437072 ABCC10Q5T3U5 1492 aa26.88■■□□□ 1.89
H2AFV-206ENST00000437072 ABCA10Q8WWZ4 1543 aa26.88■■□□□ 1.89
H2AFV-206ENST00000437072 ADAMTS12P58397 1594 aa26.8■■□□□ 1.88
H2AFV-206ENST00000437072 PRG4Q92954 1404 aaPredicted RBP26.78■■□□□ 1.88
H2AFV-206ENST00000437072 KDM6BO15054 1643 aa26.78■■□□□ 1.88
H2AFV-206ENST00000437072 DIP2BQ9P265 1576 aa26.77■■□□□ 1.88
H2AFV-206ENST00000437072 MAPKBP1O60336 1514 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms