RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 AEBP2Q6ZN18 517 aaPredicted RBP41.38■■■■■ 4.21
DNAAF4-CCPG1-202ENST00000568310 CHIC1Q5VXU3 224 aa40■■■■□ 3.99
DNAAF4-CCPG1-202ENST00000568310 SENP3Q9H4L4 574 aaPredicted RBP35.22■■■■□ 3.23
DNAAF4-CCPG1-202ENST00000568310 PHF23Q9BUL5 403 aaPredicted RBP35.12■■■■□ 3.21
DNAAF4-CCPG1-202ENST00000568310 FOXD1Q16676 465 aa32.72■■■□□ 2.83
DNAAF4-CCPG1-202ENST00000568310 PLPPR3Q6T4P5 718 aa32.3■■■□□ 2.76
DNAAF4-CCPG1-202ENST00000568310 PPP6R1Q9UPN7 881 aa31.15■■■□□ 2.58
DNAAF4-CCPG1-202ENST00000568310 ADRA2BP18089 450 aa31.1■■■□□ 2.57
DNAAF4-CCPG1-202ENST00000568310 PIAS4Q8N2W9 510 aaPredicted RBP30.76■■■□□ 2.51
DNAAF4-CCPG1-202ENST00000568310 MSH5O43196 834 aa30.37■■■□□ 2.45
DNAAF4-CCPG1-202ENST00000568310 SCAF1Q9H7N4 1312 aaKnown RBP28.48■■■□□ 2.15
DNAAF4-CCPG1-202ENST00000568310 POTEDQ86YR6 584 aa28.41■■■□□ 2.14
DNAAF4-CCPG1-202ENST00000568310 PPP4R3CPQ6ZMV5 832 aa28.4■■■□□ 2.14
DNAAF4-CCPG1-202ENST00000568310 MAPK8IP2Q13387 824 aaPredicted RBP28.34■■■□□ 2.13
DNAAF4-CCPG1-202ENST00000568310 DMRT2Q9Y5R5 561 aa28.03■■■□□ 2.08
DNAAF4-CCPG1-202ENST00000568310 CNKSR2Q8WXI2 1034 aa27.72■■■□□ 2.03
DNAAF4-CCPG1-202ENST00000568310 NCBP3Q53F19 620 aaKnown RBP27.55■■■□□ 2
DNAAF4-CCPG1-202ENST00000568310 HOXD11P31277 338 aaPredicted RBP27.28■■□□□ 1.96
DNAAF4-CCPG1-202ENST00000568310 RNF216Q9NWF9 866 aaPredicted RBP27.28■■□□□ 1.96
DNAAF4-CCPG1-202ENST00000568310 KCNA4P22459 653 aa27.24■■□□□ 1.95
DNAAF4-CCPG1-202ENST00000568310 NPM3O75607 178 aaKnown RBP27.12■■□□□ 1.93
DNAAF4-CCPG1-202ENST00000568310 DCAF8L1A6NGE4 600 aa26.86■■□□□ 1.89
DNAAF4-CCPG1-202ENST00000568310 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
DNAAF4-CCPG1-202ENST00000568310 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.01■■□□□ 1.75
DNAAF4-CCPG1-202ENST00000568310 RNF39Q9H2S5 420 aa25.97■■□□□ 1.75
DNAAF4-CCPG1-202ENST00000568310 SLC4A1APQ9BWU0 796 aaKnown RBP25.87■■□□□ 1.73
DNAAF4-CCPG1-202ENST00000568310 SLC4A2P04920 1241 aa25.71■■□□□ 1.71
DNAAF4-CCPG1-202ENST00000568310 C1QBPQ07021 282 aaKnown RBP25.65■■□□□ 1.7
DNAAF4-CCPG1-202ENST00000568310 CACNB1Q02641 598 aaPredicted RBP25.63■■□□□ 1.69
DNAAF4-CCPG1-202ENST00000568310 U3KPZ7 1027 aaPredicted RBP25.52■■□□□ 1.68
DNAAF4-CCPG1-202ENST00000568310 FOXD4L1Q9NU39 408 aa25.2■■□□□ 1.62
DNAAF4-CCPG1-202ENST00000568310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.08■■□□□ 1.61
DNAAF4-CCPG1-202ENST00000568310 MYCNP04198 464 aaPredicted RBP25.08■■□□□ 1.61
DNAAF4-CCPG1-202ENST00000568310 HNRNPUL2Q1KMD3 747 aaKnown RBP25.08■■□□□ 1.61
DNAAF4-CCPG1-202ENST00000568310 ZBTB22O15209 634 aa25.03■■□□□ 1.6
DNAAF4-CCPG1-202ENST00000568310 SAMD1Q6SPF0 538 aaPredicted RBP24.96■■□□□ 1.59
DNAAF4-CCPG1-202ENST00000568310 SPINK5Q9NQ38 1064 aaPredicted RBP24.94■■□□□ 1.58
DNAAF4-CCPG1-202ENST00000568310 APLP2Q06481 763 aa24.93■■□□□ 1.58
DNAAF4-CCPG1-202ENST00000568310 CAPN15O75808 1086 aa24.88■■□□□ 1.57
DNAAF4-CCPG1-202ENST00000568310 TRHP20396 242 aaPredicted RBP24.66■■□□□ 1.54
DNAAF4-CCPG1-202ENST00000568310 ZNF219Q9P2Y4 722 aaPredicted RBP24.65■■□□□ 1.54
DNAAF4-CCPG1-202ENST00000568310 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
DNAAF4-CCPG1-202ENST00000568310 DSG3P32926 999 aa24.56■■□□□ 1.52
DNAAF4-CCPG1-202ENST00000568310 CSRNP3Q8WYN3 585 aa24.55■■□□□ 1.52
DNAAF4-CCPG1-202ENST00000568310 ATF5Q9Y2D1 282 aaPredicted RBP24.43■■□□□ 1.5
DNAAF4-CCPG1-202ENST00000568310 ATXN8OSP0DMR3 200 aa24.38■■□□□ 1.49
DNAAF4-CCPG1-202ENST00000568310 ABCB7O75027 752 aa24.35■■□□□ 1.49
DNAAF4-CCPG1-202ENST00000568310 POLA2Q14181 598 aa24.16■■□□□ 1.46
DNAAF4-CCPG1-202ENST00000568310 ZBTB12Q9Y330 459 aaPredicted RBP23.73■■□□□ 1.39
DNAAF4-CCPG1-202ENST00000568310 FBLN2P98095 1184 aa23.47■■□□□ 1.35
DNAAF4-CCPG1-202ENST00000568310 RBM42Q9BTD8 480 aaKnown RBP23.43■■□□□ 1.34
DNAAF4-CCPG1-202ENST00000568310 MKRN4PQ13434 485 aaPredicted RBP23.34■■□□□ 1.33
DNAAF4-CCPG1-202ENST00000568310 OSCARQ8IYS5 282 aa23.34■■□□□ 1.33
DNAAF4-CCPG1-202ENST00000568310 SPDYE2BA6NHP3 402 aa23.05■■□□□ 1.28
DNAAF4-CCPG1-202ENST00000568310 SPDYE6P0CI01 402 aa23.05■■□□□ 1.28
DNAAF4-CCPG1-202ENST00000568310 SPDYE2Q495Y8 402 aa23.05■■□□□ 1.28
DNAAF4-CCPG1-202ENST00000568310 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
DNAAF4-CCPG1-202ENST00000568310 ZNF692Q9BU19 519 aaPredicted RBP22.9■■□□□ 1.26
DNAAF4-CCPG1-202ENST00000568310 REM2Q8IYK8 340 aaPredicted RBP22.82■■□□□ 1.24
DNAAF4-CCPG1-202ENST00000568310 SSUH2Q9Y2M2 353 aa22.81■■□□□ 1.24
DNAAF4-CCPG1-202ENST00000568310 SPDYE4A6NLX3 237 aa22.63■■□□□ 1.21
DNAAF4-CCPG1-202ENST00000568310 CHRDL2Q6WN34 429 aa22.63■■□□□ 1.21
DNAAF4-CCPG1-202ENST00000568310 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
DNAAF4-CCPG1-202ENST00000568310 PITPNM1O00562 1244 aa22.55■■□□□ 1.2
DNAAF4-CCPG1-202ENST00000568310 SPDYE1Q8NFV5 336 aaPredicted RBP22.49■■□□□ 1.19
DNAAF4-CCPG1-202ENST00000568310 POTEHQ6S545 545 aa22.42■■□□□ 1.18
DNAAF4-CCPG1-202ENST00000568310 CLEC11AQ9Y240 323 aa22.41■■□□□ 1.18
DNAAF4-CCPG1-202ENST00000568310 PIP4P2Q8N4L2 257 aa22.24■■□□□ 1.15
DNAAF4-CCPG1-202ENST00000568310 FKBP8Q14318 412 aa22.23■■□□□ 1.15
DNAAF4-CCPG1-202ENST00000568310 FXR2P51116 673 aaKnown RBP eCLIP22.22■■□□□ 1.153e-7■■■■■ 27.1
DNAAF4-CCPG1-202ENST00000568310 PROM2Q8N271 834 aa22.17■■□□□ 1.14
DNAAF4-CCPG1-202ENST00000568310 PRR29P0C7W0 189 aa22.15■■□□□ 1.14
DNAAF4-CCPG1-202ENST00000568310 STAG3Q9UJ98 1225 aa22.13■■□□□ 1.13
DNAAF4-CCPG1-202ENST00000568310 PRKAR2AP13861 404 aaKnown RBP21.99■■□□□ 1.11
DNAAF4-CCPG1-202ENST00000568310 CHADLQ6NUI6 762 aa21.89■■□□□ 1.09
DNAAF4-CCPG1-202ENST00000568310 CREBZFQ9NS37 354 aa21.74■■□□□ 1.07
DNAAF4-CCPG1-202ENST00000568310 HAX1O00165 279 aa21.66■■□□□ 1.06
DNAAF4-CCPG1-202ENST00000568310 FARP1Q9Y4F1 1045 aaPredicted RBP21.65■■□□□ 1.06
DNAAF4-CCPG1-202ENST00000568310 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
DNAAF4-CCPG1-202ENST00000568310 MIER1Q8N108 512 aa21.52■■□□□ 1.04
DNAAF4-CCPG1-202ENST00000568310 C19orf67A6NJJ6 358 aa21.48■■□□□ 1.03
DNAAF4-CCPG1-202ENST00000568310 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
DNAAF4-CCPG1-202ENST00000568310 MNX1P50219 401 aaPredicted RBP21.46■■□□□ 1.03
DNAAF4-CCPG1-202ENST00000568310 PLCD3Q8N3E9 789 aa21.43■■□□□ 1.02
DNAAF4-CCPG1-202ENST00000568310 EVX2Q03828 476 aa21.41■■□□□ 1.02
DNAAF4-CCPG1-202ENST00000568310 NPM1P06748 294 aaKnown RBP eCLIP21.4■■□□□ 1.02
DNAAF4-CCPG1-202ENST00000568310 SP7Q8TDD2 431 aaPredicted RBP21.35■■□□□ 1.01
DNAAF4-CCPG1-202ENST00000568310 CD44P16070 742 aaKnown RBP21.33■■□□□ 1.01
DNAAF4-CCPG1-202ENST00000568310 VASPP50552 380 aaPredicted RBP21.27■■□□□ 1
DNAAF4-CCPG1-202ENST00000568310 ZBTB47Q9UFB7 747 aaPredicted RBP21.24■□□□□ 0.99
DNAAF4-CCPG1-202ENST00000568310 PAK3O75914 559 aaPredicted RBP21.15■□□□□ 0.98
DNAAF4-CCPG1-202ENST00000568310 ZRANB1Q9UGI0 708 aa21.15■□□□□ 0.98
DNAAF4-CCPG1-202ENST00000568310 ZNF579Q8NAF0 562 aaKnown RBP21.04■□□□□ 0.96
DNAAF4-CCPG1-202ENST00000568310 KLHL34Q8N239 644 aa21.03■□□□□ 0.96
DNAAF4-CCPG1-202ENST00000568310 TSPYL2Q9H2G4 693 aaPredicted RBP21.02■□□□□ 0.96
DNAAF4-CCPG1-202ENST00000568310 RASEFQ8IZ41 740 aa21■□□□□ 0.95
DNAAF4-CCPG1-202ENST00000568310 GABBR2O75899 941 aa20.99■□□□□ 0.95
DNAAF4-CCPG1-202ENST00000568310 NUBP1P53384 320 aa20.99■□□□□ 0.95
DNAAF4-CCPG1-202ENST00000568310 IFNLR1Q8IU57 520 aaPredicted RBP20.95■□□□□ 0.94
DNAAF4-CCPG1-202ENST00000568310 CLCN6P51797 869 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms